Juglans regia (English walnut): 108985664
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Entry
108985664 CDS
T05245
Name
(RefSeq) probable U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
jre
Juglans regia (English walnut)
Pathway
jre03018
RNA degradation
jre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108985664
09123 Folding, sorting and degradation
03018 RNA degradation
108985664
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jre03019
]
108985664
03041 Spliceosome [BR:
jre03041
]
108985664
Messenger RNA biogenesis [BR:
jre03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108985664
mRNA degradation factors
5'-3' decay
Lsm complex
108985664
Spliceosome [BR:
jre03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
108985664
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
108985664
NCBI-ProteinID:
XP_018813587
UniProt:
A0A2I4E2G2
A0A833TM05
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All DBs
Position
8:complement(11592984..11596386)
Genome browser
AA seq
148 aa
AA seq
DB search
MLPLSLLKSAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
IRGNTIKYLRVPDEVIDKVQEETKSRSDRRPPGVVGRGRGRGREDGAGGRQPKGIGRGLD
DGGAKGGRGRGGSGGKAGGNRGAGRGRG
NT seq
447 nt
NT seq
+upstream
nt +downstream
nt
atgcttccactttctctacttaagagtgcccaagggcacccaatgttggtggaactgaaa
aatggggagacctataacgggcatttggtcaactgtgatacttggatgaacattcatctt
cgtgaagtcatctgtacctctaaagatggagatagattttggcgaatgcctgaatgctac
atccgtgggaatacaatcaagtacctccgagttcctgatgaggtgatagataaggttcag
gaagaaaccaagagccgctcagataggagaccacccggggttgttgggcgcggaagagga
cggggtagggaggatggtgctggtggacgccaaccaaaaggaattggacgaggtttggat
gatggaggtgctaagggaggccgaggcagaggtggatccggtggaaaggctggtggaaac
agaggtgctggacgtggccgtggctga
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integrated database retrieval system
