Juglans regia (English walnut): 108987768
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Entry
108987768 CDS
T05245
Name
(RefSeq) zinc finger matrin-type protein 2-like
KO
K12848
U4/U6.U5 tri-snRNP component SNU23
Organism
jre
Juglans regia (English walnut)
Pathway
jre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108987768
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
jre03041
]
108987768
Spliceosome [BR:
jre03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
108987768
Complex C
U4/U6.U5 tri-SnRNP related factors
108987768
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-met
zf-C2H2_jaz
zf-U1
SNRNP27
Vma22_CCDC115
zf-C2H2
Ferlin_C
Motif
Other DBs
NCBI-GeneID:
108987768
NCBI-ProteinID:
XP_018816323
UniProt:
A0A2I4EA96
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All DBs
Position
8:complement(28325478..28335815)
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AA seq
203 aa
AA seq
DB search
MAHTSDDVVGVDNTFRRKFDREEYLERARERERQEADARVKSKSRGPPVQRKPLKHRDFE
VDLESRLGKTQVVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVE
RASVEQVKERFEVLKKRRVPGSFTEQDLDERILKQQQEEEERKRQRREKKKEKKKEKAAE
EEIEVDPDVAAMMGFGGFSSSKK
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atggcacacaccagcgacgatgttgtaggggttgataacactttcagaaggaagtttgat
cgggaagagtatttggaacgagccagggagcgtgaaagacaggaggcggacgcgcgggtt
aaatcaaaatcgagaggtcctccagtgcaaaggaagcccttgaaacatagggattttgaa
gtagaccttgaatctcgcttgggaaaaactcaggttgttactccagtggcacctttaagt
cagcaggctggatactactgttccgtttgtgagtgtgtcgtgaaggattctgcaaattac
ttggatcatatcaatggaaagaaacatcaaagagcgctgggtatgtctatgcgggtagaa
cgggcatctgtcgaacaggtcaaggagagatttgaagttctcaagaaacgtagagttcct
ggcagcttcacagagcaagatcttgatgagcggatcttaaagcagcagcaagaagaggag
gaacggaagcgccaacgtcgagaaaagaaaaaagagaagaagaaagagaaggcagcagag
gaggaaattgaagtggatcctgatgttgcagctatgatgggatttggaggattcagttca
tccaagaagtga
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