KEGG   Juglans regia (English walnut): 109004585
Entry
109004585         CDS       T05245                                 
Name
(RefSeq) splicing factor SF3a60 homolog
  KO
K12827  splicing factor 3A subunit 3
Organism
jre  Juglans regia (English walnut)
Pathway
jre03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:jre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109004585
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:jre03041]
    109004585
Spliceosome [BR:jre03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    109004585
 Complex B
    109004585
 Complex C
   U2 SnRNP specific factors
    109004585
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd Desulfoferrod_N
Other DBs
NCBI-GeneID: 109004585
NCBI-ProteinID: XP_018838722
UniProt: A0A2I4G488
LinkDB
Position
16:1737697..1747776
AA seq 510 aa
MSSTLLEVTRAAHEDVERLERLIVKDLLNEPTTSKDRLFQSHRVRNMIDTIISTTNKLVE
IYDDKDNARKDEIAALGGQTATGTNVFSAFYDRLKEIREYHRRHPAARVVDATEEYEALL
KEEPIIEFSGEEALGRYLDMHELFNQYINSKFGDPSTEYSAYLDVFSQPRKIPRKLKLTR
QYREYMENLLEYLIYFFQRTEPLQDLDRIFSKVVTEFEEQWANRKVQGWENDGQENGHVP
AQHTIIDLDYYSTVEELVEVGPEKLKETLAAFGLKTGGTVQQCAERLFLTKHTPLEQLER
KHFAKGTRASEQNRAGAAPEQDDNAKEIALIEAKMKKLCILLDETIARTKDNIVKKQALT
YEEIEAEREEEETQADTESDDEEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEIC
GNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKDLWKKIQERQGVNKW
RPDLEEEYEDREGNIYNKKTYSDLQRQGLI
NT seq 1533 nt   +upstreamnt  +downstreamnt
atgtcgtcgacgttgctggaggtgacgagggcggctcacgaggacgtggaacggctggag
aggctgatagtgaaggacctgctgaacgagcctactaccagcaaggaccgcctctttcag
agccaccgcgttcggaacatgatcgacactatcatttccaccaccaataaactcgtagag
atttatgatgataaggataatgccaggaaggatgagattgcagctcttggaggccaaact
gcgacaggaacaaatgtgtttagtgcattttatgatagattgaaagagattcgagaatac
catagaaggcatccggctgcacgtgttgttgatgctactgaggagtacgaggccctactt
aaagaagaacctataatcgagtttagtggagaggaagctttggggcgatacctagacatg
catgaattattcaaccagtacattaattccaaatttggggacccttctaccgagtactct
gcttaccttgatgttttttcacaaccacgtaagattcctcgcaaactgaaattaacgaga
caatacagggaatatatggagaatctattggaatacctaatatatttttttcagcgaaca
gaacccttgcaagatcttgatagaatattctcaaaggttgtgactgaatttgaagagcaa
tgggcaaatagaaaggtacaaggatgggagaatgacggtcaagaaaatggacatgttcct
gctcagcatactataattgatcttgattattacagcacagttgaagagctggtggaagtt
ggtcctgaaaagttaaaggagacattggctgcgtttggactaaagacaggtggtactgtt
cagcagtgtgctgaaaggcttttcctaacaaagcacacacctcttgagcagttggaaagg
aaacattttgccaaaggaactcgtgcgtccgaacaaaaccgggctggtgctgctccagaa
caagatgacaatgcaaaagaaatagccctaattgaggccaaaatgaaaaaactgtgtatc
ttattggacgagacgattgcacggacaaaagacaatatcgtgaagaagcaggctttgaca
tatgaggaaattgaagcagaacgtgaggaggaggaaacacaagctgatactgaaagtgat
gatgaagaacagcagatttataatcccctcaagttgccaatgggttgggatgggaagcct
ataccatattggctgtataagcttcatggtcttggtcaggaattcaagtgtgagatatgt
gggaactatagttactggggccgtagggcttttgaacggcatttcaaggaatggcgtcat
cagcatgggatgcgctgccttggtattccaaacaccaagaacttcaatgagatcacatca
atcgaggaagcgaaagatctgtggaagaaaatacaagaacgacaaggagtgaacaagtgg
cgcccggatcttgaagaggaatacgaagacagagagggtaatatctacaataagaagaca
tacagtgatctgcagcggcagggattgatttga

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