Juglans regia (English walnut): 109006051
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Entry
109006051 CDS
T05245
Name
(RefSeq) probable pectate lyase 20
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
jre
Juglans regia (English walnut)
Pathway
jre00040
Pentose and glucuronate interconversions
jre01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109006051
Enzymes [BR:
jre01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
109006051
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
109006051
NCBI-ProteinID:
XP_018840745
UniProt:
A0A2I4GA45
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Position
1:16461849..16466100
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AA seq
445 aa
AA seq
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MAVSLRWFSVGSLLLVLTLLFISVMASKENDQLVQSRFAEAEELQSSKNASMADRSEDAW
NEHAVQDPEEVASMVDLSISNSTRKRNLGYFSCGTGNPIDDCWRCDRRWYHRRKNLANCA
IGFGRNAVGGCDGRYYVVSDPSDDDPVNPKPGTLRHAVIQDRPLWIVFKRDMVITLKQEL
IMNSFKTIDGRGANVHIAYGACITIQFITNVIIHGLHIHDCKPTGNAMVRSSPSHFGWRT
MADGDAISIYGSSHIWVDHNSLSNCADGLIDAVMGSTAITISNNHFTHHNEVMLLGHSDS
YTRDKQMQVTIAYNHFGKGLIQRMPRCRHGHFHVVNNDYTHWEMYAIGGSANPTINSQGN
RYLAPANPFAKEVTKRMCEENGTWKRWNWRSEGDLLLNGAYFIPSGARVTASYARASSLG
AKSSSVVGAITSGAGVLTCRRGYQC
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggcggtatctctgagatggttttctgttggctcattgctgctggttctaacgctgctt
tttataagcgtcatggcctccaaagaaaatgatcaacttgtacagtcaaggtttgcagag
gcagaggagttgcaaagctccaaaaatgcgtcaatggcggacaggtcagaggatgcatgg
aatgagcacgctgtccaggatccagaggaggtagcttctatggttgatctgagcattagc
aatagcactcgtaagaggaacttgggatatttttcatgtggaacagggaacccgatcgac
gactgttggcgctgtgacaggcgctggtatcaccgccgaaagaacctagccaactgtgcc
attgggtttggaaggaatgcggttggcggctgtgacggcagatactacgttgttagtgac
cccagtgatgatgaccctgttaaccctaaaccgggtacgctccgccacgcagtcattcag
gacaggcctttgtggattgtgtttaagcgggatatggtgatcacactcaagcaggagctt
attatgaacagctttaagaccattgatggtcggggtgctaatgtccacattgcttatggg
gcttgcattacgatccaattcattacaaatgtcatcatccatggcctgcacatccacgat
tgcaagccaacaggcaacgccatggtgcggagctcgccaagccattttgggtggaggaca
atggctgatggggatgccatttctatttacggttcgagccatatttgggttgaccacaac
tcactctctaattgtgctgatggccttatcgatgctgtaatgggctccactgccattacc
atttctaacaaccacttcacccaccacaatgaggttatgctattgggtcacagcgactcc
tatacaagagataagcagatgcaggtgaccattgcctacaaccattttggtaagggacta
atccagagaatgccaaggtgtaggcatggacatttccatgtggtaaacaatgactacaca
cattgggaaatgtatgccattggtggaagtgctaatcctaccattaacagtcagggcaat
agatatcttgcacctgccaacccttttgccaaggaggtgacaaagaggatgtgcgaagaa
aatggtacatggaagcgctggaactggagatcagaaggagatcttctgcttaatggagcc
tacttcattccatcaggagctagagttacagccagctatgccagagcctcaagtttgggg
gccaagtcctcttccgtggttggtgccattacttccggtgctggtgtccttacttgccgc
aggggttaccagtgttga
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