KEGG   Juglans regia (English walnut): 109013211
Entry
109013211         CDS       T05245                                 
Name
(RefSeq) splicing factor SF3a60 homolog
  KO
K12827  splicing factor 3A subunit 3
Organism
jre  Juglans regia (English walnut)
Pathway
jre03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:jre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109013211
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:jre03041]
    109013211
Spliceosome [BR:jre03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    109013211
 Complex B
    109013211
 Complex C
   U2 SnRNP specific factors
    109013211
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd Desulfoferrod_N
Other DBs
NCBI-GeneID: 109013211
NCBI-ProteinID: XP_018850767
UniProt: A0A2I4H3P3
LinkDB
Position
13:complement(38208904..38222524)
AA seq 510 aa
MSSTLLEVTRAAHEDVERLERLIVKDLQNEPATSKDRLFQSHRVRNMIDTIISTTEKLVE
IYDDNDNARKDEIAALGGQTATGTNVFSAFYDRLKEIREYHRRHPAARVVDATEEYEALL
KEEPIIEFSGEEALGRYLDMHELFNLYINSKFGEPSTEYSAYLDIFSQPHKISRKLKLTR
QYREYMENLLEYLVYFFQRTEPLQDLDRIFLKVVAEFEEQWANGNIQGWEKEGQENGHVP
AQHTVIDLDYYSTVEELMEFGPEKLKEALAALGLKTGGTVQQRAERLFLTKHTPLEKLDK
KHFAKGARASQQNQAAAVPEQDDNVKEIALLETKLKKLCDLLDETIARTKDNVVKKQALT
YEEIEAEREEEETQADTESDDDEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEIC
GNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKDLWKKIQERQGVNKW
RPDLEEEYEDREGNIYNKKTYADLQRQGLI
NT seq 1533 nt   +upstreamnt  +downstreamnt
atgtcgtcgacgttgctggaggtgacgagggcagcacatgaggacgtggagcggctggag
aggctgatagtgaaggacctccagaatgagccggctactagcaaggaccgcctctttcag
agccaccgcgtccgcaacatgatcgacactatcatttccaccactgaaaaactcgtagag
atttatgatgataacgataatgccaggaaggatgagattgcggctcttggaggccaaact
gcaactggaacgaatgtgtttagtgcattttatgatagattgaaagagattcgtgaatac
catagaaggcatccagctgctcgtgttgttgatgctactgaggagtatgaggcactactt
aaagaagaacctatcatcgagtttagtggagaggaagctcttgggcgatacctagacatg
catgaattatttaacctgtacattaattctaaatttggggagccttctaccgagtactct
gcttaccttgatattttttcacaaccgcataagatttctcgcaaactaaagttaacaagg
caatacagggaatatatggagaatctattggaataccttgtatatttttttcagcggaca
gagcccttgcaagatcttgatagaatattcttgaaggttgtggctgaatttgaagagcaa
tgggcgaatggaaatatacaaggatgggagaaagagggtcaagaaaatggacatgttcct
gctcagcatactgttattgaccttgattattacagtacagttgaagagctgatggaattc
ggtccagaaaagttaaaagaggcattggctgcattagggcttaagactggcggtaccgtt
cagcagcgtgctgaaaggcttttccttacaaagcatacacctctcgagaagttggacaag
aaacattttgccaaaggtgcacgtgcatcacaacaaaaccaggctgctgcagttccagaa
caagatgacaatgtaaaagaaatagccctattggagaccaagttgaaaaaactctgtgac
ttattggacgagacaattgcacgaacgaaagacaatgtcgtgaagaagcaggctttgaca
tatgaggaaattgaagcagaacgtgaggaggaagaaacacaagctgatactgaaagtgat
gatgatgagcagcagatttataatcccctcaagttgccaatgggttgggatgggaagcca
ataccatattggctgtataagcttcacggtcttggtcaggaattcaagtgtgagatatgt
gggaactacagttactggggccgtagggcttttgaacggcatttcaaggaatggcgccat
caacatgggatgcgctgccttggtattccaaacaccaagaacttcaatgagatcacatca
attgaggaagcaaaagatctgtggaagaagatacaagaacggcaaggagtgaacaagtgg
cgcccagatcttgaagaagaatatgaagacagagagggcaatatctacaacaagaagaca
tatgctgatctgcagcggcagggattgatttaa

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