Juglans regia (English walnut): 109014310
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Entry
109014310 CDS
T05245
Name
(RefSeq) nuclear pore complex protein NUP93A-like
KO
K14309
nuclear pore complex protein Nup93
Organism
jre
Juglans regia (English walnut)
Pathway
jre03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109014310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jre03019
]
109014310
Messenger RNA biogenesis [BR:
jre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109014310
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
TPR_14
TPR_12
TPR_2
TPR_8
TPR_1
TPR_7
PrmA
Motif
Other DBs
NCBI-GeneID:
109014310
NCBI-ProteinID:
XP_018852272
UniProt:
A0A2I4H7Z2
A0A833Y0M3
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Position
3:complement(3620351..3630528)
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AA seq
861 aa
AA seq
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MANEQGMSGWTDLLHSSTKLLEQAAPSAQFPPLQRNLDQLEALSKKLKAKTLRTEAPSQS
IAATRLLAREGINAEQLARDLKSFELKTTFEDVFPAEATSVEEYLQQVHEMAMVSAIQEA
QKDNLRSFNDYMMKVLEEDWQKEKRDFLQSLSRISTLPRANVMNTRGTHPGQIVSIASNP
QVSPGPSTMDLVPLGNKPILEKKASVYAEVVKNLNNARERGLPFKPATAFKGAYESLGLE
GSSGKSVNMQKIWHLIQMLMGEDSTVQRNVSKKMSLVIGARRHLEWGHEKYIMDTIQSHP
AQAALGGAVGNLQRIRAFLRIRLRDYGVLDFDAGDARRQPPVDTTWQQIYFCLRTGFYDE
ARTVALSSRASHQFAPLLTEWTNTGGMVSSGTAAAASDECEKILRLADRVGRAAYDKKKL
LLYALISGSRKQIDRLLRDLPTLFNTIEDFLWFKLSAVRDYPIGASSITLNEGLVPYSLD
DLQVYLNKFDPSYYTKNGKDPLVYPYVLLLSIQLLPAVMYLSKETGDEGYNIDAAHFSIV
LGDHGVLSEGASAGQKLGVMDAYAEASSIIRQYGSVYLRLGDLSMALEYYAQAAAAVGGG
QLSWTGRGNVDQQRQRSLMLKQLLTELLLRDGGIYLLLGSRGTGEEGELGRFLNDAKARH
QFLLEAAHQCQETGLYDKSIEIQKRVGAFSLALDTINKCLSDAVCAFSHGRLDGDSRTAG
LIHSGNEILETYKYYPEVSPQEREHVLGQQTVLRQLEAILSIHKLAISGRHLDALREVAK
LPFLPLDPRVPDISVDVFQNLSSHVQACVPELLKVALTCLDNLTDTDGSLRALRAKIASF
IANNLNRNWPRDLYEKVARSL
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatgaacaaggcatgagtggctggaccgatctgctccactcctcaacgaagctt
cttgaacaagccgctccttccgctcagttccctcctcttcagagaaacttagatcagtta
gaagcattatctaagaagctcaaagccaaaaccctacgaactgaggctccttctcaatct
attgctgccacaaggctacttgcgcgagagggcataaatgcagagcaacttgcacgggat
ctgaagtcttttgaattgaagacaacatttgaggatgttttccctgctgaggcaactagt
gtcgaggagtatttacagcaggttcatgagatggcaatggtttcagccattcaggaagct
cagaaggataaccttagaagctttaatgattacatgatgaaagttttggaggaggactgg
caaaaggaaaaacgtgattttcttcagagtttaagcagaatttcaacattgcctcgggct
aacgtgatgaatactaggggtactcatccaggtcaaattgtgtccattgcatctaaccct
caagtttcacctggcccatctaccatggatcttgtacctctaggtaacaagcctatcctt
gagaaaaaggcatcagtctatgctgaagttgtgaagaatctaaataatgcaagggagcgc
ggtttgccatttaagcccgctacagctttcaagggcgcttatgaaagtttgggccttgag
ggatctagtggaaaatctgttaacatgcagaagatctggcacctcattcagatgttgatg
ggtgaggattcaactgtgcaacgaaatgtttcaaaaaagatgtcattagtcattggtgca
aggcgccacctggaatgggggcatgagaaatatatcatggatacaatacaaagtcatcct
gcgcaggctgctcttggtggagctgttggaaatttgcaaagaattcgcgcctttcttcgg
attcgtttaagggattatggagttctagattttgatgctggtgatgctcgtagacaacct
cctgttgataccacctggcagcagatctatttttgtttgagaactggattttatgatgaa
gcaagaactgttgctctgtcatcccgtgcttcacaccaatttgctccactgcttacagag
tggaccaatactggagggatggtatcatccgggactgcagctgctgcatcagatgaatgt
gaaaaaatcttaagactggctgatcgggtgggccgagcggcatatgataagaaaaagtta
ttgctctatgctctcatatctggttctcgcaagcaaattgatcgtctgcttagagatcta
ccaactctgttcaacactatagaggatttcttatggttcaaactctctgctgtacgggac
tacccaattggagcctcatccattactctgaatgaggggttggtaccatacagtttggac
gatctacaggtctacctgaacaaatttgatccatcatattatacaaaaaatggaaaggac
cctttggtatacccttatgttttgcttttaagtatccagttgttgccagctgtcatgtac
ttgtctaaggaaacgggagatgaaggatataacattgatgctgcccacttttcaattgtg
ttgggagaccatggggtcctttctgaaggtgccagtgctgggcaaaaactgggagtgatg
gatgcttatgctgaggcgtctagtataattcggcagtatggatctgtatacttgcgtctt
ggagatctatcaatggcattagaatattatgcacaagcagctgctgcggtgggtggtgga
cagctatcatggaccggaagaggtaacgtggatcagcaaaggcagagaagcttaatgttg
aagcaacttcttactgagctgttgttacgggacggtgggatctatcttttacttggctca
agaggtacaggagaagaaggtgagttgggaaggtttttgaatgatgcaaaagctagacat
caatttctgcttgaagctgctcatcagtgtcaggaaactgggctttatgacaaatctata
gaaattcagaagagagtcggggctttttcactggcactggataccatcaataagtgcctc
tctgatgcagtatgcgccttctcacatggtagattagatggtgatagccggactgctggc
ctcatccattctggcaatgagatactggagacatataaatattatcctgaagtcagtcct
caagagagagagcatgttttggggcaacaaactgtgttaagacaacttgaggcgatatta
tcaatccacaagttggcaatatcgggccgtcatctagatgctttaagggaggttgccaaa
cttccatttcttccattagatccacgagtgccagatattagtgttgatgtgttccagaat
ttatcttctcatgtgcaagcttgtgttccggaacttctgaaggttgctctcacctgcctg
gacaatttgacagatactgatggatcactccgtgcattgagggctaagattgcaagcttt
attgctaataatttgaataggaattggcctcgtgatctgtatgaaaaggtcgcccgaagc
ttgtga
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