Juglans regia (English walnut): 109021805
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Entry
109021805 CDS
T05245
Name
(RefSeq) transcription factor SPEECHLESS-like
KO
K20558
transcription factor SPEECHLESS
Organism
jre
Juglans regia (English walnut)
Pathway
jre04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
109021805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
jre03000
]
109021805
Transcription factors [BR:
jre03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
109021805
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GFIT
Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
Motif
Other DBs
NCBI-GeneID:
109021805
NCBI-ProteinID:
XP_018860073
UniProt:
A0A833XLW5
A0A2I4HVB3
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Position
5:9786483..9790065
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AA seq
344 aa
AA seq
DB search
MDDILSDFYEYDEFGDTKYRLAQDHDDDLFSILENGLECVAGFHDLPKRNHEVVDHISKQ
GFQETTSVPKSKRPKPTPAAGVNPSEEENRPEVEQQRTSHIAVERNRRKQMNDSLSVLRS
LTPHFYVKRGDQASIIAGVIDYINEMHQVLKCLEDKKHRKVNYMSEVLLSPKLQAQQVSS
PRPSPARSPIKLPPSPRLNLAVCPRTPQPCSPYKPWLHQAGYLSPATTMATSIEPSPSRS
SLSATSESTSTVNELAANSKSHIAEVEVNFSGPNLLLKTVSPRIPGQAVKIISALQELSL
QILHLSTRTVEETVVNSFTIEVGIECQLSAEELAQLIQQTFSIY
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggatgatattttgtctgatttttatgaatatgatgaattcggagataccaaatatcgc
ttggctcaagatcatgatgatgatcttttcagcatcttggagaatgggttagaatgcgtg
gcggggtttcatgatcttccgaagagaaatcatgaagtcgtggatcacatttcgaaacaa
ggttttcaagagacaacatcagtaccaaaaagcaagaggccgaagcctacgccggcagct
ggggtgaatccttcggaggaagaaaaccggccggaagtagagcaacaaaggacgtctcat
attgctgtggagcgcaaccggaggaagcaaatgaacgacagtttgtcggtgttgaggtca
ctcacgcctcacttctatgtcaaaagaggagatcaagcatccataattgcaggggtgatc
gattacatcaacgaaatgcatcaagttctaaaatgtctggaggacaagaagcatcgaaaa
gtgaactacatgagtgaagtcctcctgagccctaagctgcaggcgcagcaggtttcaagt
ccaagaccctcacctgcacgtagccctataaagctgccaccaagccctagactaaaccta
gccgtgtgccccagaaccccacagccatgtagcccatacaagccatggttgcaccaagca
ggttacctctctccggccaccaccatggctacttccattgagccatctccttcgagatct
tctttatctgctacttccgagagtactagtactgtcaatgagcttgctgcaaattccaag
tctcacatagcagaagtggaggtgaatttttcgggtccaaatcttcttttgaaaacagta
tctcctcggattcctgggcaagccgtgaaaataatttccgctctccaagaactctccctt
caaattctccacctaagcacaaggactgttgaagaaactgtggtgaactccttcaccatt
gaggttggaattgaatgtcaacttagcgcagaggaactggcacaactaattcagcaaaca
ttctcgatctactaa
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