Janthinobacterium svalbardensis: CNX70_24660
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Entry
CNX70_24660 CDS
T05119
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
jsv
Janthinobacterium svalbardensis
Pathway
jsv00521
Streptomycin biosynthesis
jsv00523
Polyketide sugar unit biosynthesis
jsv00525
Acarbose and validamycin biosynthesis
jsv00541
O-Antigen nucleotide sugar biosynthesis
jsv01100
Metabolic pathways
jsv01110
Biosynthesis of secondary metabolites
jsv01250
Biosynthesis of nucleotide sugars
Module
jsv_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
jsv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
CNX70_24660 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CNX70_24660 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
CNX70_24660 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CNX70_24660 (rfbB)
00525 Acarbose and validamycin biosynthesis
CNX70_24660 (rfbB)
Enzymes [BR:
jsv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
CNX70_24660 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
adh_short
Motif
Other DBs
NCBI-ProteinID:
ATD62979
UniProt:
A0A290X1I5
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Position
complement(5540808..5541881)
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AA seq
357 aa
AA seq
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MIVVTGGAGFIGSNFVNDWLASSDEPILNLDKLTYAGNLNNLKAVSEDARHMFVQGDICD
RAQLDALFFDNKPRAIVHFAAESHVDRSILGPGEFVNTNINGTFSLLEAARTYWSGLPDE
ERAAFRFLHVSTDEVYGTLGPDDAPFSETTPYAPNSPYSASKAASDHLVRAYHHTYGLPT
LTTNCSNNYGPYHFPEKLVPLIIANARAGKPLPIYGDGQQVRDWLYVSDHCAAIRRVLED
GRLGETYNIGGWNEKANLDVVYTLCDILDELSPKASGGSYREQITYVADRPGHDRRYAID
ARKIERELDWRPAETFESGIKKTVQWYLANQEWVADVQSGAYLNWMEKNYAARKEAP
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgattgtagtgaccggcggtgctggctttataggatcaaatttcgtaaatgactggctt
gcctccagcgacgagccgattcttaatctggataagctaacttatgcaggaaatttgaat
aacttgaaggcggtgagcgaggatgcccggcacatgtttgtgcaaggcgatatttgtgat
cgtgctcagctcgatgcgttgttttttgacaacaagccgcgtgcgattgttcatttcgct
gccgaaagccatgtggatcggtctattctcggccctggtgagtttgtcaatacaaatatt
aacggcacattcagtttgctcgaggccgcccgcacgtattggtctggcctgcctgacgag
gagcgggccgctttccgcttcctgcacgtatcaaccgatgaggtgtacggtacgctgggg
ccagatgatgcgcctttcagcgaaacgaccccgtatgcgcccaacagcccctattccgcc
tccaaggccgcttcggatcatctcgtccgcgcctatcatcatacgtatggcttgccgacg
ctgacgacaaattgttcgaataattatgggccgtatcacttccccgagaagttggttccg
ttgattatcgccaacgcgcgggctggcaaaccgctgcccatttatggcgatggacaacag
gttcgcgactggctgtatgtcagtgaccattgtgccgccattcgccgcgtacttgaggat
gggcgtttgggcgagacctacaacattggcggatggaatgagaaagctaacctggatgtc
gtgtataccctgtgcgacatactcgacgagctgtcgccgaaggcgtctggcggatcgtac
cgggagcagatcacgtatgtggcggatcgtccaggtcatgaccgtcgctatgccattgat
gcccgtaaaatcgagcgggagttggactggcggcctgcggaaaccttcgagagtggcatc
aaaaaaacggtgcagtggtatctggctaaccaggaatgggtggccgatgtgcaatcgggc
gcctatctgaactggatggaaaagaattacgcggcgcgcaaggaggcgccatga
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