Janibacter indicus: ASJ30_02745
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Entry
ASJ30_02745 CDS
T04569
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
jte
Janibacter indicus
Pathway
jte03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
jte00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ASJ30_02745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jte03021
]
ASJ30_02745
03400 DNA repair and recombination proteins [BR:
jte03400
]
ASJ30_02745
Enzymes [BR:
jte01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ASJ30_02745
Transcription machinery [BR:
jte03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ASJ30_02745
DNA repair and recombination proteins [BR:
jte03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ASJ30_02745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
APH00577
UniProt:
A0A1L3MDU8
LinkDB
All DBs
Position
557445..560927
Genome browser
AA seq
1160 aa
AA seq
DB search
MAASRTASPMSTARTASGRLSFAKIREPLEVPDLLALQTESFDWLLGNEKWQERLADALD
AGRRDVPEHPGLEEIFEEISPIEDFSGSMSLSFRESRFEEPKYSVDDCKERDQTYSAPLF
VTAEFMNAETGEIKSQTVFMGDFPLMTERGTFIINGTERVVVSQLVRSPGVYFERTPDKT
SDKDVYSAKVIPSRGAWLEFEVDKRDMVGVRVDRKRKQSVTVLLKALGMTSAEILEEFGD
YESMRATLDKDTVEDQDAALLDIYRKLRPGEPPTREAAQNLLDNLYFNPKRYDLAKVGRY
KVNRKLGVEADLDSSVLTLEDIVATLKYLVALHADQPTLPGVRDGEPLEVPVETDDIDHF
GNRRLRSVGELIQNQVRTGLSRMERVVRERMTTQDVEAITPQTLINIRPVVASIKEFFGT
SQLSQFMDQNNPLSGLTHKRRLNALGPGGISRDRAQMEVRDVHPSHYGRMCPIETPEGPN
IGLIGSLASYGRINAFGFIETPYRKVEAGRVTDEIVYISADEEDKVIVAQANAVLLDDGT
FAEERVLARTKGGEVDQIPAEDVDYMDVSPRQMVSAATAMIPFLEHDDANRALMGANMQR
QAVPLVQAEAPFVGTGMEHRAALDSGDVVRAEKAGVVTEVSADLVTVTQDEGGSRSYKMM
KFSRSNQGNSYNQRVMVSEGDRVEAGQLIADGPATDGGEMALGRNLLVAFMPWEGYNYED
AIILSQRLVQDDVLSSIHIEEHEVDARDTKLGPEEITRDIPNVSEEVLADLDERGIIRIG
AEVRDGDLLVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSMKVPHGETGTVIGVKVF
DKDEGDELPPGVNQLVRVYVANKRKITDGDKLAGRHGNKGVISKILPVEDMPFLEDGTPV
DVVLNPLGVPGRMNIGQILELHLGWAASRGWQIEGEPEWAEMIPHDARQAPANTRVASPV
FDGAREEEITGLLDSTTPTRDGVRLIDRSGKANLFDGRTGEPYPDPVSVGYMYILKLHHL
VDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGASYALQELLTIKSDDV
TGRVKVYEAIVKGDNIPEPGIPESFKVLIKEMQSLCLNVEVLNSEGGTIEMRDNEDDVFR
AAEELGIDLSRREPSSVEEV
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
ttggctgcctcgcgcaccgcttccccgatgtccaccgcacggacggccagtggccgtctg
tccttcgcaaagatccgcgagcccctcgaggtccccgacctcctggccctccagacggag
agcttcgactggctcctgggcaacgagaagtggcaggagcgtctcgccgacgctctcgac
gccggtcgacgtgacgtccccgagcacccggggctggaggagatcttcgaggagatctcc
ccgatcgaggacttctccggctcgatgagcctctccttccgggagagccgcttcgaggag
ccgaagtactccgtcgacgactgcaaggagcgcgaccagacctactccgcgcccctcttc
gtcaccgccgagttcatgaacgccgagaccggcgagatcaagagccagacggtcttcatg
ggtgacttcccgctcatgaccgagcgcggcaccttcatcatcaacggcaccgagcgcgtc
gtcgtctcgcagctcgtgcgcagcccgggcgtctacttcgagcgcacccccgacaagacc
tccgacaaggacgtctactcggccaaggtcatcccgagccgcggtgcgtggctcgagttc
gaggtcgacaagcgcgacatggtcggcgtccgcgtcgaccgcaagcgcaagcagtcggtc
accgtcctgctcaaggccctgggcatgacctccgcggagatcctcgaggagttcggcgac
tacgagtcgatgcgcgccaccctcgacaaggacaccgtcgaggaccaggacgccgcgctg
ctcgacatctaccgcaagctgcgccccggcgagccaccgacccgtgaggccgcgcagaac
ctgctcgacaacctctacttcaaccccaagcgctacgacctggccaaggtcggccgctac
aaggtcaaccgcaagctcggtgtcgaggccgacctcgactcctcggtgctcacgctcgag
gacatcgtcgcgacgctcaagtacctcgtcgccctgcacgccgaccagccgacgctcccg
ggtgtccgcgacggcgagcccctcgaggtgccggtcgagaccgacgacatcgaccacttc
ggcaaccgtcgtctgcgctcggtcggcgagctcatccagaaccaggtccgcaccggcctg
tcgcggatggagcgcgtcgtgcgcgagcggatgacgacccaggacgtcgaggcgatcacg
ccccagacgctcatcaacatccggccggtcgtcgcctccatcaaggagttcttcggcacc
agccagctgtcgcagttcatggaccagaacaacccgctgtcggggctgacgcacaagcgt
cgcctcaacgcgctgggcccgggcggtatctcccgtgaccgcgcgcagatggaggtccgt
gacgtccacccgtcgcactacggccgcatgtgcccgatcgagacccctgagggtcccaac
atcggtctgatcggctcgctggccagctacggccggatcaacgccttcggcttcatcgag
accccgtaccgcaaggtcgaggccggtcgggtcaccgacgagatcgtctacatctcggcg
gacgaggaggacaaggtcatcgtggcccaggccaacgccgtcctcctcgacgacggcacc
ttcgccgaggagcgggtcctcgcccggaccaagggtggcgaggtcgaccagatcccggcc
gaggacgtcgactacatggacgtctcgccgcgacagatggtctccgccgcgaccgcgatg
atccccttcctcgagcacgacgacgccaaccgcgcgctcatgggcgccaacatgcagcgt
caggccgtgccgctcgtccaggccgaggcccccttcgtcggcaccggcatggagcaccgt
gcagcgctcgactcgggcgacgtcgtccgtgctgagaaggcgggtgtcgtcaccgaggtc
tccgccgacctggtgaccgtcacgcaggacgagggcggttcgcgctcgtacaagatgatg
aagttctcccggtccaaccagggcaacagctacaaccagcgcgtcatggtctccgagggt
gaccgcgtcgaggccggtcagctgatcgccgacggtcccgcgaccgacggcggcgagatg
gccctcgggcgcaaccttctcgtggccttcatgccctgggagggctacaactacgaggac
gccatcatcctcagccagcgtctggtgcaggacgacgtcctctcctcgatccacatcgag
gagcacgaggtcgacgcccgcgacaccaagctcggccccgaggagatcacccgcgacatc
cccaacgtctccgaggaggtcctcgcggacctcgacgagcgcggcatcatccgcatcggt
gccgaggtgcgcgacggcgacctgctcgtcggcaaggtcacgcccaagggcgagaccgag
ctgacccccgaggagcgcctgctccgcgcgatcttcggcgagaaggcgcgcgaggtgcgc
gacacctcgatgaaggtcccccacggcgagaccggcaccgtcatcggcgtcaaggtcttc
gacaaggacgagggcgacgagctgcccccgggcgtcaaccagctggtgcgcgtctacgtc
gccaacaagcgtaagatcaccgatggtgacaagctcgccggccgtcacggcaacaagggc
gtcatctccaagatcctgcccgtcgaggacatgcccttcctcgaggacggcaccccggtc
gacgtcgtgctcaacccgctcggtgtccccggccgcatgaacatcggccagatcctcgag
ctgcacctgggctgggccgccagccgcggatggcagatcgagggcgagcccgagtgggcc
gagatgatcccgcacgacgcgcgccaggctccggccaacacgcgcgttgccagccccgtc
ttcgacggtgcccgcgaggaggagatcaccggtctgctcgactcgacgaccccgacccgc
gacggtgtgcggctcatcgaccgctccggcaaggccaacctcttcgacggccgtaccggt
gagccctacccggacccggtgtccgtcggctacatgtacatcctcaagctgcaccacctc
gtggacgacaagatccacgcccgcagcacgggtccgtactcgatgatcacccagcagccg
ctgggtggtaaggcccagttcggtggccagcgcttcggcgagatggaggtgtgggccctc
gaggcctacggcgcctcttacgcgctccaggagctgctcaccatcaagtccgacgacgtg
accggtcgcgtcaaggtctacgaggccatcgttaagggcgacaacatccccgagccgggg
atcccggagtccttcaaggtgctcatcaaggagatgcagtccctctgcctcaacgtggag
gtcctcaactccgagggcggcaccatcgagatgcgcgacaacgaggacgacgtcttccgc
gccgccgaggagctcggcatcgacctgtcccggcgcgagccgagctcggtcgaagaggtc
tga
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integrated database retrieval system
