Janibacter indicus: ASJ30_02750
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Entry
ASJ30_02750 CDS
T04569
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
jte
Janibacter indicus
Pathway
jte03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
jte00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ASJ30_02750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jte03021
]
ASJ30_02750
03400 DNA repair and recombination proteins [BR:
jte03400
]
ASJ30_02750
Enzymes [BR:
jte01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ASJ30_02750
Transcription machinery [BR:
jte03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ASJ30_02750
DNA repair and recombination proteins [BR:
jte03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ASJ30_02750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
APH00578
UniProt:
A0A1L3ME33
LinkDB
All DBs
Position
561066..564947
Genome browser
AA seq
1293 aa
AA seq
DB search
MLDANFFDELRIGLATAEDIRNWSHGEVKKPETINYRTLKPEKEGLFCERIFGPTRDWEC
SCGKYKRVRFKGIICERCGVEVTRAGVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITSVDEDQRHSDLPSLEAQIEAEKRELENRRDADVETRAQKLEKD
IAELEAEGAKSDAKRKVRDSAEREMNQIRKRADQQVERLAQVWDRFKNLKVQDLEGDEVL
YREMRDRFGLYFEGGMGAAAIQKRLETFDLEAEADKLREIIATGKGQKKTRALKRLKVVT
AFLTTDNKPAGMVLDAVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDNLFDNGRRGRAVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKAMALELFKPFVMKRLVDLDHAQNIKSAKRMVERQR
SVVWDVLEEVITEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILKPADGRPVTMPTQDMVIGLFHLSSEVALETEHRR
AFATTAEARMAFDAGEIKIGTPIKVRLTDVVPPIGHELPEGAELDERGMLATWTAETTLG
RALFNETLPENYPFVNEPVDRKRLSTIVNDLAERYTKVEVAASLDALKEAGYHWASRSGT
TVAVSDVVTPPRKPEILATYEEKATKVQKQYERGLITDDERRQEQIEIWTQATNEVSAEM
QQNFPKDNPIFRMVNSGARGNWFQLRQIAGMRGLMANPKGEIIPRPIRTNFREGLSVVEF
FISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREDDCGTERGLTMPIAQFDELTG
TRRKHDDVEFTVYGRCVATDVEHEGTVLAEAGSDLGDVVIDKLYKAGVDELKIRSVLTCE
SKVGTCAKCYGRSLATGQLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGL
PRVVELFEARTPKGVAPIAEADGRITIEETDKGRRILLVADRDGEEHAYPVSKRSRLLVE
DGERVAVGTQLVQGAIDPKQVLRILGPRHAQKHLVDEVQKVYRQQGVSIHDKHIEVIVRQ
MLRRITILESGDANLLPGMLAERARFESENRRVVAEGGRPASGRPELMGITKASLATDSW
LSAASFQETTRVLTEAAMEGRSDPLLGLKENVILGKLIPAGTGLPRYRNVDVEPTEEAKA
AMYSLPNYDEYAYPVFGPGSGEAIRLDDLDLDV
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
gtgctggacgccaacttcttcgacgagctgcgcatcggcctggccaccgcggaggacatc
cgcaactggagccacggcgaggtcaagaagcccgagaccatcaactaccgcaccctcaag
cccgagaaggagggcctgttctgcgagcggatcttcggccccacccgggactgggagtgc
tcctgcggcaagtacaagcgagtccgcttcaagggcatcatctgcgagcgctgcggcgtc
gaggtcacccgcgccggcgtgcgtcgtgagcggatgggtcacatcgagctggccgccccc
gtcacccacatctggtacttcaagggcgtcccgagccgcctcgggtacctgctcgacctg
gcgccgaaggacctcgagaaggtcatctacttcgccgcctacatgatcacgagcgtcgac
gaggaccagcgtcacagcgacctgccctcgctcgaggcgcagatcgaggccgagaagcgc
gagctggagaaccgccgcgacgcggacgtcgagacccgcgcccagaagctcgagaaggac
atcgccgagctcgaggccgagggcgccaagtccgacgccaagcgcaaggtccgcgactcc
gccgagcgcgagatgaaccagatccgcaagcgggccgaccagcaggtcgagcgcctcgcg
caggtctgggaccgcttcaagaacctcaaggtccaggacctcgagggcgacgaggtcctc
taccgcgagatgcgtgaccgcttcggtctgtacttcgagggcggcatgggcgctgcggcg
atccagaagcgcctcgagaccttcgacctcgaggccgaggccgacaagctgcgcgagatc
atcgccaccggcaaggggcagaagaagacccgcgccctcaagcgcctcaaggtcgtcacc
gccttcctcaccaccgacaacaagccggccggcatggtcctggacgcggtcccggtcatc
ccgccggacctgcgcccgatggtccagctcgacggtggccgcttcgccacctccgacctc
aacgacctctaccgccgcgtcatcaaccgcaacaaccgcctcaagcgactgctcgacctc
ggtgcgcccgagatcatcgtcaacaacgagaagcggatgctgcaggaggccgtcgacaac
ctcttcgacaacggtcgtcgcggtcgtgcggtcaccggcccgggcaaccgcccgctgaag
tcgctgtccgacatgctcaagggcaagcagggtcgcttccgtcagaacctcctcggcaag
cgcgtcgactactccggccgttcggtcatcgtcgtcggcccgcagctgaagctgcaccag
tgcggtctgcccaaggccatggcgctcgagctgttcaagcccttcgtcatgaagcggctc
gtcgacctcgaccacgcccagaacatcaagtcggccaagcgcatggtcgagcgtcagcgc
tcggtcgtgtgggacgtcctcgaagaggtcatcaccgagcaccccgtgctgctcaaccgt
gcgcccacgctgcaccgtctgggcatccaggccttcgagccgcagctcgtcgagggcaag
gccatccagatccacccgctcgtctgcacggccttcaacgccgacttcgacggtgaccag
atggccgtccacctgccgctgagcgcggaggcccaggccgaggcccggatcctcatgctc
tcgagcaacaacatcctcaagccagccgacggtcgacccgtcaccatgccgacgcaggac
atggtcatcggcctgttccacctctcctccgaggtggcgctggagaccgagcaccgtcgc
gccttcgcgacgacggccgaggcccgcatggccttcgacgccggcgagatcaagatcggt
acgccgatcaaggtccggctgaccgacgtcgtcccgccgatcggccacgagctgcccgag
ggtgccgagctcgacgagcgcggcatgctcgcgacgtggaccgccgagacgacgctgggc
cgggcgctcttcaacgagacgctcccggagaactaccccttcgtcaacgagccggtcgac
cgcaagcgtctgtcgacgatcgtcaacgacctcgccgagcgctacaccaaggtcgaggtc
gcggcatcgctcgacgccctcaaggaggccggctaccactgggcctcccgttcgggcacg
acggttgccgtctccgacgtcgtcacgccgccgcgcaagcctgagatcctcgcgacctac
gaggagaaggcgaccaaggtccagaagcagtacgagcgcggtctgatcaccgacgacgag
cgtcgtcaggagcagatcgagatctggacccaggcgaccaacgaggtctctgccgagatg
cagcagaacttcccgaaggacaaccccatcttccggatggtcaactcgggtgctcgtggt
aactggttccagctgcgccagatcgccggtatgcgtggcctcatggccaaccccaagggt
gagatcatcccgcgcccgatccgtacgaacttccgtgagggtctgtccgtcgtcgagttc
ttcatctcgacgcacggtgcgcgcaagggtctggccgacaccgcccttcgtaccgccgac
tcgggctacctgacccgtcgtctcgtcgacgtctcccaggacgtcatcatccgcgaggac
gactgcgggaccgagcgtggcctgacgatgccgatcgcgcagttcgacgagctcacgggc
acccgtcgcaagcacgacgacgtcgagttcacggtctacgggcgctgcgtcgcgaccgac
gtcgagcacgagggcaccgtcctggccgaggccggctccgacctgggcgatgtcgtcatc
gacaagctctacaaggccggcgtcgacgagctgaagatccgttcggtcctcacctgcgag
tccaaggtgggcacctgcgccaagtgctacggccgcagcctggccaccggccagctcgtc
gacatcggcgaggccgtcggcatcatcgcggcccagtcgatcggtgagcccggtacccag
ctgacgatgcgtaccttccacaccggtggtgtggccggtgacgacatcacgcagggtctg
ccgcgagtcgtcgagctcttcgaggcgcgtacccccaagggtgtcgccccgatcgccgag
gccgacggtcggatcaccatcgaggagaccgacaagggccgccgcatcctgctcgtcgcg
gaccgcgacggcgaggagcacgcctacccggtgagcaagcgttcgcgcctgctcgtcgag
gacggcgagcgggtcgccgtcggcacccagctcgtccagggcgccatcgaccccaagcag
gttctgcgcatcctcggcccgcgccacgcccagaagcacctcgtcgacgaggtgcagaag
gtctaccgccagcagggtgtgtcgatccacgacaagcacatcgaggtcatcgtccggcag
atgctgcgccggatcaccatcctcgagtcgggtgacgccaacctcctgccgggcatgctc
gccgagcgtgcgcgcttcgagtcggagaaccgtcgcgtcgtcgccgagggcggtcgcccg
gcctcgggtcgtccggagctcatgggcatcaccaaggcctcgctcgccacggactcctgg
ctctccgccgcctccttccaggagacgacccgcgtcctcaccgaggccgcgatggagggc
cgctccgacccgctgctgggcctgaaggagaacgtcatcctcggaaagctcatccccgcc
ggtacgggtctgccccgttaccgcaacgtggacgtcgagcccaccgaggaggccaaggcc
gcgatgtactcgctgcccaactacgacgagtacgcctacccggtcttcggtcccggctcc
ggcgaggcgatccgcctcgacgacctggacctggacgtctga
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