Jatrophihabitans telluris: M6D93_17175
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Entry
M6D93_17175 CDS
T08151
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
jtl
Jatrophihabitans telluris
Pathway
jtl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
jtl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
M6D93_17175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jtl03021
]
M6D93_17175
03400 DNA repair and recombination proteins [BR:
jtl03400
]
M6D93_17175
Enzymes [BR:
jtl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
M6D93_17175
Transcription machinery [BR:
jtl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
M6D93_17175
DNA repair and recombination proteins [BR:
jtl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
M6D93_17175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
UQX88013
UniProt:
A0ABY4QX02
LinkDB
All DBs
Position
complement(3722902..3726228)
Genome browser
AA seq
1108 aa
AA seq
DB search
MQTESFDWLIGNAAWQERVAKADPTYTNSTSGLEEILGEISPIEDFSGSMSLSFSSPRFE
DVKASIEECKDKDMTYAAPLFVTAEFTNNTTGEIKSQTVFMGDFPMMTRKGTFVINGTER
VVVSQLVRSPGIYFDRTLDKTSDVDVFSVKVIPSRGAWLEFDVDKRSTVGVRIDRKRRQP
VTVLLKALGWSADRIREHFSWSETLLATLEKDHIPGQDEALLDIYRKLRPGEPPTRESAQ
ALLDNLFFNGKRYDLAKVGRYKANKKLGTDTEIDHGTLTEDDIVKTIEYLVRLHAGEDGY
EVDDIDHFGNRRLRTVGELIQNQIRVGLSRMERVVRERMTTQDVEAITPQTLINIRPVVA
SIKEFFGTSQLSQFMDQTNPLAGLTHKRRLSALGPGGLSRDRAGMEVRDVHTSHYGRMCP
IETPEGPNIGLIGSLASYGRINAFGFVETPYRKVTNGSVTDEIHYLTADEEDKNTIAQAN
ATIDAQGLFTEPKVLVRKKGGEVELVDSAEVDYMDVSPRQMVSVATAMIPFLEHDDANRA
LMGANMQRQAVPLLRSEAPLVGTGMELRAAVDAADVVVADKPGVVEEVSADYITVMADDG
TRNTYRLSKFARSNQGTSFNQKPIVDEGARVEHGQVLADGPSTDFGEMALGKNLLVAFMP
WEGHNYEDAIILNQRIVQDDVLTSIHIDEHEVDARDTKLGAEEITRDIPNVSDEVLADLD
ERGIVRIGADVVTGDVLVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSMKVSHGGDG
KVIGVRVFSREDGDELPPGVNELVRVYIAQKRKIQDGDKLAGRHGNKGVIAKILPPEDMP
FLKDGTPVDIVLNPLGVPGRMNIGQVLETHLGWVAKTGWEVEGTPEWAARLPEPARQGDP
GTNVATPVFDGAREGEITGLLDSTLRTRDGDQLIGHTGKAQLIDGRSGDPFPEPVSVGYV
YILKLLHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMECWAMQAYGAAYALQEL
LTIKSDDILGRVKVYEAIVKGENIPEPGIPESFKVLLKELQSLCLNVEVLSSDGVAVEMR
DTDDDVFRAAEELGIDLSRREPSSVEEV
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaacggaatcattcgactggctgatcggaaacgcagcctggcaggagcgggtcgcc
aaggccgacccgacttacaccaactccacctcgggcctggaggagatcctcggcgagatt
tcgccgatcgaggacttctccggttccatgtcgctgtccttctcctcgccccgcttcgag
gacgtcaaggcctccatcgaggagtgcaaggacaaggacatgacgtacgcggcgccgctg
ttcgtcaccgctgagttcaccaacaacaccactggcgagatcaagagccagaccgtgttc
atgggtgatttcccgatgatgacccgcaagggcaccttcgtgatcaacggcaccgagcgc
gtcgtggtgtcccagctcgtccggtcgccgggtatctacttcgaccgcacgctggacaag
acctccgacgtcgacgtgttctcggtcaaggtcatcccgagccgaggtgcctggctggag
ttcgacgtcgacaagcgctcgaccgtcggtgtgcgtatcgaccgcaagcgccgtcagccg
gtcaccgtcctgctcaaggccctcggctggagcgcggaccgcatccgcgagcacttctcc
tggtcggagacgctgctggccaccctggagaaggaccacattccgggtcaggacgaggcg
ctgctcgacatctaccgcaagctgcgtcccggcgagcccccgacccgtgagtcggcccag
gcgttgctggacaacctgttcttcaacggcaagcgctacgacctggccaaggtcggccgc
tacaaggccaacaagaagctgggcaccgacaccgagatcgaccacggcaccctgaccgag
gacgacatcgtcaagaccatcgagtacctcgtccggctgcacgccggcgaggacggctac
gaggtcgacgacatcgaccacttcggcaaccgccggctgcgcaccgtcggggagctgatc
cagaatcagatccgcgtcggcctgtcccggatggagcgggtcgtccgcgagcggatgacg
acccaggacgtcgaggcgatcacgccgcagaccctgatcaacatccgcccggtcgtcgcc
tccatcaaggagttcttcggcacgtcgcagctgtcgcagttcatggaccagaccaacccg
ctggcgggcctgacccacaagcgtcggctgtccgcgctcggcccgggtggtctgtcccgt
gaccgtgccggcatggaggttcgtgacgtccacaccagccactacggccggatgtgcccg
atcgagaccccggaaggcccgaacatcggcctgatcggatcgcttgcctcctacggccgg
atcaacgccttcggcttcgtcgagaccccgtaccgcaaggtcaccaacggttcggtcacc
gacgagatccactacctgaccgccgatgaagaggacaagaacacgatcgcgcaggccaac
gcgacgatcgatgctcagggcctgttcaccgagcccaaggtgctggttcgtaagaagggc
ggcgaggtcgaactcgtcgactcggccgaggtcgactacatggacgtctcaccgcgccag
atggtgtcggtcgcgacggcgatgatcccgttcctcgagcacgacgacgccaaccgcgcc
ctgatgggcgccaacatgcagcgccaggctgtgccgctgctccgttccgaggccccgctc
gtgggcaccggcatggagcttcgtgccgcggtcgacgccgccgacgtggtggtcgccgac
aagcccggcgtggtggaagaggtctcggccgactacatcaccgtgatggctgacgacggc
acccgcaacacgtaccggctgtcgaagttcgcgcgctcgaaccagggcaccagcttcaac
cagaagccgatcgtggacgagggggcccgggtcgaacatggccaggtgctcgcagacggc
ccgtcgaccgacttcggtgagatggcgctgggcaagaacctgctcgtggcgttcatgccg
tgggaaggccacaactacgaggacgcgatcatcctcaaccagcggatcgtccaggacgac
gtcctgacctcgatccacatcgacgagcacgaggtcgacgctcgcgacaccaagctgggc
gctgaggagatcacccgggacatcccgaacgtctccgacgaggttctggccgacctcgac
gagcgcggcatcgtccgcatcggtgccgatgtggtgaccggtgacgtgctggtcggcaag
gtgacgccgaagggcgagaccgagctcacgccggaggagcgcctgctgcgcgccatcttc
ggtgagaaggcccgcgaggtgcgtgacacctcgatgaaggtcagccacggtggtgacggc
aaggtgatcggcgttcgggtgttctcccgcgaggacggcgacgagcttccgccgggcgtc
aacgagctggttcgcgtctacatcgcccagaagcgcaagatccaggacggcgacaagctc
gccggccggcacggcaacaagggcgtcatcgccaagatcctgccgccggaggacatgccg
ttcctcaaggatggcacgccggtcgacatcgtgctcaacccgctcggcgtgccgggccgg
atgaacatcggccaggttctggagacccacctcggctgggtcgccaagaccggctgggaa
gttgaggggaccccggaatgggccgctcgactgcctgagccggcccgccagggcgatccc
ggcaccaacgtcgcgaccccggtcttcgacggcgcccgggaaggggagatcaccggtctc
ctcgactcgaccctgcggacccgcgacggtgaccagctgatcggtcacaccggcaaggcc
cagctgatcgacggacgctccggcgacccgttccctgagcccgtctcggtcggctacgtc
tacatcctgaaactgctgcacctggtcgacgacaagatccacgcccgttcgaccggcccg
tactcgatgatcacccagcagccgctgggtggtaaggcgcagttcggtggtcagcgcttc
ggcgagatggagtgctgggcgatgcaggcctacggcgcggcttacgcgctgcaggaactg
ctgacgatcaagtccgacgacatcctcggccgcgtgaaggtctacgaggccatcgtcaag
ggcgagaacattcccgagcctggtatccccgagtcgttcaaggtgctgctgaaggaactt
cagtcgctgtgcctgaacgtcgaggtgctgtcctccgacggtgtggccgtcgagatgcgc
gacacggacgacgacgtcttccgggccgccgaggaactgggcatcgatctgtcgcggcgc
gagccgagcagcgtcgaagaggtctga
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integrated database retrieval system
