Kazachstania africana: KAFR_0G00400
Help
Entry
KAFR_0G00400 CDS
T02487
Symbol
KAFR0G00400
Name
(RefSeq) hypothetical protein
KO
K12853
114 kDa U5 small nuclear ribonucleoprotein component
Organism
kaf
Kazachstania africana
Pathway
kaf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
kaf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
KAFR_0G00400 (KAFR0G00400)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
kaf03041
]
KAFR_0G00400 (KAFR0G00400)
Spliceosome [BR:
kaf03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
KAFR_0G00400 (KAFR0G00400)
Complex C
U5 SnRNP specific factors
KAFR_0G00400 (KAFR0G00400)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFG_IV
EFG_C
EFTUD2
MMR_HSR1
EF-G_D2
EFG_III
Roc
LRR_9
Motif
Other DBs
NCBI-GeneID:
13884564
NCBI-ProteinID:
XP_003958208
UniProt:
H2AXH3
LinkDB
All DBs
Position
7:117436..120303
Genome browser
AA seq
955 aa
AA seq
DB search
MDDDLYDEFGNLVGEDQNTSEEQASSSRESDFGEDSNIPEGESQDAEVLSNALVKTDLND
VYGDEVEVLVETENTQSINEPLVAPSMGRSRGKEYGLFSQLRKNVPKTKYDREYLLSLLA
VPERIRNVAVIGPLHSGKTSLCDLLVLESHEKMPHVTKNIRQGWKQLKYTDTMKQEVQRG
LSTKLNGFTLLSTDLNNNSIAMNVLDAPGHVNFMDEVAVALTASEIAIIVLDIVEGVTSV
VEQLIKQCEKRKIKMIFLLNKIDRLIIEMKLPPLDAYLKIKHCVDKINSFTKDLHSPVLG
NVLFASTKLNFTFSIREFVTYHYMDRIPNSKVDGLIDRLWGDYHFKNGQFVEITNVMNET
PTFLDFILLPLYKIITQTLSVVDYDKLADSLEQNFNIHLNQNEISQMDSLPLLRHVLTLI
FRTEAGLTHVIAQNKIAMLKSDKKLLARALKTLDYGGNDYTLLKIQEGVLDSNSKFFVID
SNKDFDEDEKNFDESLSVTEIALMGARYVYNVDRAGPGQIVLVKGISSAFDKSATIVAND
TENIEGNLFKPLDYINYPCFKVFIQPLVPKELPKLLNALNKINKYYPGVVIKVEESGEHV
ILGFGELYMDCLLYDLRTNYANIEIKISDPVAIFTESCQNESFAAIPVTSSSGKLSISIG
AKPLDRAFLKDLSKGKLNEFEIDNQVKTGNMRDLSRKLREEYGWDSLTARNVWTFHNCNV
LVDDTLPDETDKTTLNKYKSQIKQGFYWAMREGPLCEEDIYGIQFQLLGFELQNGDDDNE
ISGSQLIPMIRKACYIAMMTASPIIMEPIYEVNIVAKSAILPIVEELFHNRRGAKIYRVA
KIVGTPLLEVRGQIPVIESIGFETDLRLSTRGNAMCQLHFWSKIWRKVPGDVLDENAVIP
KLKPAPIQSLSRDFVMKTRKRKGISNDGITSHDGPSLAKYIDPELFEQLKSNDLI
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgatttgtatgatgagtttgggaatctagtcggagaagatcagaatacttct
gaggagcaggcgagctcgtcgagagagagtgattttggtgaagatagtaacatcccagaa
ggtgaaagccaagatgcggaagttctaagtaatgccttggttaagacagatttgaacgat
gtatacggggatgaggttgaggttctggtggagacggagaatacgcaatcgataaatgaa
ccgctggtggctccctcgatgggtaggtccagaggaaaagaatatggattgttttcacaa
ttgaggaaaaacgttccaaagactaaatatgacagagagtatttgctttcattacttgct
gttcctgagagaattaggaatgtagccgtcattggacctttacattccggtaagacgtca
ctttgtgatctattagtgctggagtctcatgaaaagatgccacacgttactaaaaatatt
agacagggctggaagcaattgaaatatacggacaccatgaaacaagaagtgcaaagagga
ttaagtactaaattaaatgggtttacacttttgtcaacagatctaaacaacaattccatt
gcgatgaatgtacttgacgctccaggtcatgtgaatttcatggacgaagttgctgtcgca
ttgactgcttctgaaatagctatcattgttctcgacattgtagaaggtgtaacatccgtt
gtcgaacagttaataaagcaatgtgagaaaagaaaaatcaaaatgatttttctcttaaac
aagatcgatagattgattattgaaatgaaacttcctccattagatgcatacttgaaaata
aagcattgtgtggataaaattaactcattcactaaagacttacattcgccagttttagga
aacgttttattcgcttctacaaagttgaactttactttttccattagagagttcgttacg
tatcattatatggacaggattccgaatagcaaggttgacggacttattgacagactttgg
ggggattatcattttaaaaatgggcaattcgtagaaataactaatgtgatgaatgagact
cccactttccttgattttatcctgttgcctttgtacaaaataataactcaaactctatcg
gtagtagattatgataaattagctgattcactggagcaaaattttaatattcatttaaac
cagaatgaaataagccaaatggattctttaccattattgagacatgtcttgacactaatt
ttcagaacagaagcaggcttaactcatgtcattgcacaaaataaaatagctatgttaaaa
agcgataagaaacttctggcgagagctttgaaaacattagattatggcggtaatgattat
acactgcttaaaattcaagaaggtgttctggattcaaattcgaaattttttgtaattgat
agcaataaagattttgatgaagatgaaaaaaattttgatgaatccttgtcagtaactgaa
attgcattaatgggagcaagatacgtttataatgttgaccgtgctggtccgggacaaatt
gtcttagtgaaaggtatctccagtgcctttgataaatctgcaactattgtggcaaacgat
acggagaatattgaaggaaacttgtttaaaccgctcgattatattaactatccatgtttt
aaagtctttattcaaccgttggtaccaaaagagctacctaaacttctgaatgctttaaat
aaaataaataagtactatccaggagtggtgataaaagttgaggaatcaggggagcatgtc
atattgggtttcggtgaactatacatggactgtcttctatatgatttgagaaccaactat
gccaatattgaaattaaaatatctgatccggtcgcgatctttaccgaaagttgtcaaaat
gaatcgtttgcagcaataccagtcacgtcttcaagtggcaaattgtcgataagtatagga
gcaaagcctcttgatagggctttcctgaaagatttgagcaagggtaaactaaatgaattt
gaaattgataatcaagttaaaaccggaaatatgagagatttatcaagaaaattgagagaa
gagtatggttgggattctttaacagcaagaaacgtctggacttttcataactgtaatgtc
ctagttgatgatacactacctgacgaaacagataaaactactctcaataagtataagtca
caaattaaacaaggtttttattgggcaatgagagaagggcctctttgtgaagaagatata
tacggaatccagtttcaacttctgggatttgagcttcaaaatggtgatgacgacaatgaa
attagtggaagccaattaattcctatgataaggaaagcatgctatattgcaatgatgaca
gcaagcccaataataatggaaccaatttacgaagtcaatattgtcgcaaaaagtgcaata
cttcccattgtagaggaactattccataataggagaggtgccaagatatacagagtcgca
aaaatagtgggtacaccgttattagaggtgcggggtcaaataccagtaatcgaatcgatt
ggttttgagaccgatttaagattgagcacacgcggtaacgctatgtgtcagttacatttt
tggagtaaaatttggagaaaagtcccaggtgatgtactagatgagaacgcagtaataccg
aaattgaaacctgcaccaattcaaagtctcagtcgtgattttgtaatgaaaacgagaaag
aggaagggtatctccaatgacggcatcacatcacatgacggaccttccttagccaaatat
atcgatcctgaattgtttgagcaattaaaatcgaatgatttgatataa
DBGET
integrated database retrieval system
