Ketobacter alkanivorans: Kalk_06795
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Entry
Kalk_06795 CDS
T05294
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
kak
Ketobacter alkanivorans
Pathway
kak03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kak00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Kalk_06795 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kak03019
]
Kalk_06795 (pnp)
03016 Transfer RNA biogenesis [BR:
kak03016
]
Kalk_06795 (pnp)
Enzymes [BR:
kak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Kalk_06795 (pnp)
Messenger RNA biogenesis [BR:
kak03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Kalk_06795 (pnp)
Transfer RNA biogenesis [BR:
kak03016
]
Prokaryotic type
tRNA degradation factors
Kalk_06795 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
S1_2
KhpA-B_KH
DUF3016
Motif
Other DBs
NCBI-ProteinID:
AUM12136
UniProt:
A0A2K9LIF0
LinkDB
All DBs
Position
complement(1576341..1578458)
Genome browser
AA seq
705 aa
AA seq
DB search
MFKVVKKEFQFGDQTFVLETGKVARQATGAVVVSTESCSVLVTVVARKEAAPGVDFFPLT
VNYQEKFYAAGRIPGGFMKREGRPTEKETLTCRLIDRPIRPLFPEGFTNEVQVIATVMST
DKQTDPDIAALIGTSAALAIAGIPFMGPIGAARVGYTDGMYMINPTYKQLETSQLDLVVA
GTDEAVLMVESEAQELTEDQMLGAVLFGHMEMQKAITAIKEFAAEVATPSWDWKAPEENV
SLTQAVKSVVGEKLVEAYQIHDKQERYTRVGELRNDAVAALCKPEDESAPTEREVKDTFH
DLEYVTVRENILSGKPRIDGRDQKTVRPISVEVGVLPRTHGSALFTRGETQAIVAATLGS
LRDSQNIDAIEGMKTDPFMLHYNFPPFCVGEISFQLGPKRREIGHGRLARRGVQAMLPDS
ADFPYAMRVVSEITESNGSSSMASVCGTSLALMDAGVPIKAPVAGIAMGLVKEGERFAIL
SDILGDEDHLGDMDFKVAGTDNGITALQMDIKITGITEEIMETALNQAREGRLHILGEMN
KVLAAPRGTLSSDAPVYLTIKIHPDKIRDVIGKGGAMIRSICEESGAEIDIQDDGQVRIY
GQNQAAAEKALSMVEGITAEAEVGKLYTGKVQKIVDFGAFVNIFPGTDGLVHISQIAEDR
VNNVSDYLQEGQEVTVKVLDVDNRGRIKLSIKEALADQAADGSAE
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaagtggttaaaaaagaatttcaatttggtgatcagacgtttgtattggaaaca
ggaaaagttgcccgtcaggcaaccggcgctgtcgttgtttccactgaatcttgctccgtg
ctggtcacagtcgttgcccgaaaagaagctgcaccgggagtcgatttcttcccgctgaca
gtaaactatcaggaaaaattctatgctgctggccgtatacccggcggctttatgaagcgt
gaaggtcgtcctactgaaaaggaaaccttaacctgtcgtttgattgatcgtcctattcgt
ccactgttccccgaaggctttactaacgaagttcaggtaattgctacggtaatgtctact
gacaagcagactgatcccgatattgctgcgttgattggtacttctgctgctttggcgatc
gccggcattcctttcatggggccgataggtgctgcccgtgtcggttataccgatggtatg
tacatgatcaacccaacctataagcagttggaaacatcgcaactggatctggttgtggca
ggaaccgacgaagccgtgttgatggttgaatccgaagcgcaagagctgaccgaagatcaa
atgctgggtgccgttctgttcggtcacatggaaatgcagaaggcgattaccgccattaag
gaatttgccgctgaagtggcgacgccttcatgggattggaaagcgcctgaagaaaatgta
agcctgactcaggctgttaagtctgtggttggcgagaagctggtagaggcgtaccagata
cacgataagcaggaacgctacacacgtgttggcgagttgcgtaacgatgccgttgctgcc
ctgtgcaaaccagaagacgaaagtgctcctacggaacgtgaagtcaaagacacattccat
gacttggaatacgtgactgttcgggaaaatatcctgtcaggtaagccacgtattgatggt
cgcgatcagaaaaccgttcgtccaatcagtgtggaagtgggtgtgttgcctagaacccac
ggttcggcattgttcacccgtggtgaaactcaagccatcgtagctgctacattaggcagc
ttgcgtgattcgcagaacatcgatgcgattgaaggtatgaaaactgatcctttcatgctg
cattacaatttccctcctttctgcgtaggcgaaatcagcttccagcttggccccaagcgt
cgagagatcgggcatggtcgcctggctcgccgtggtgttcaggctatgttgcctgacagt
gcagatttcccttatgcgatgcgtgttgtatctgaaattactgagtccaacggttcttct
tccatggcctcggtttgcggcaccagccttgcgctgatggatgctggtgttccgatcaag
gcaccggttgctggtattgccatgggcttggtgaaagaaggcgagcgtttcgcaattctg
tccgacatcctgggtgatgaagatcatctgggcgacatggacttcaaggtggccggtaca
gacaatggtatcactgcattgcagatggatatcaagatcaccggtattaccgaagagatc
atggaaacggcattgaatcaggcgcgtgaaggccgtttgcacatattgggcgagatgaac
aaggttctggctgctccacgcggcaccttgtcgtcagatgctcctgtttaccttaccatt
aagatccatccggacaaaattcgtgatgtcatcggtaagggcggcgcgatgattcgcagt
atttgtgaagagtccggcgcagaaatcgacatccaggatgatggccaggttcgtatatac
ggccagaatcaggcagctgcggaaaaggcgttgtctatggttgaaggtattaccgcagag
gctgaagttggcaagctgtacaccggtaaggtgcagaagattgttgattttggagctttc
gttaacattttccctggtactgacggcttggttcatatttctcaaattgctgaggatcgt
gtgaacaacgtaagtgattacttgcaggaaggtcaggaagtaaccgtaaaagtgttggat
gtggacaatcgtggccgcatcaagctcagtattaaagaagcgttggccgatcaggccgca
gacggttctgctgagtaa
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