Kutzneria albida: KALB_1615
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Entry
KALB_1615 CDS
T03039
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
kal
Kutzneria albida
Pathway
kal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KALB_1615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kal03019
]
KALB_1615
03400 DNA repair and recombination proteins [BR:
kal03400
]
KALB_1615
Enzymes [BR:
kal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KALB_1615
Messenger RNA biogenesis [BR:
kal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KALB_1615
DNA repair and recombination proteins [BR:
kal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KALB_1615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Pribosyltran
PglZ_C
Motif
Other DBs
NCBI-ProteinID:
AHH94987
UniProt:
W5W296
LinkDB
All DBs
Position
complement(1777570..1779681)
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AA seq
703 aa
AA seq
DB search
MGYAWGVDELALRDLAEERLRALAGPEARLREDQWTAISALVSQRRRALVVQRTGWGKSA
VYFVATALLRALGEGPTVIVSPLLALMRNQVAAAARAGVHAATINSANTTEWDQVQQSVA
DGEVDVLLVSPERLNNPDFRDAVLPSLTASAGLLVVDEAHCISDWGHDFRPDYRRLRTLL
AGLPDGVPVLATTATANDRVVHDVTDQLGIGAGNESTLVLRGPLDRESLHLAVARLPSTE
ARLGWLAERLPELPGSGIIYTLTVSSAEDVAAFLRERGFAVASYSGKTDPAEREQAESDL
LANRVKALVATSALGMGFDKPDLGFVVHLGAPQSPIAYYQQIGRAGRGVRRAEVVLLPGR
EDREIWNYFASLAFPPEPVVRQVLDALANAGRTLSTAALEPMVELSRSRLEVVLKVLDVD
GAVRRVRGGWESTGQPWQYDAQRYGRIAQARSAEQQAMLDYLDTTGCRMEFLLRQLDDPA
AAPCGRCDNCTGRGWSTEVSESAASSARDRLRRPGVELPARRQWPSGMSALGVPLSGKIG
PAQVAAEGRVLGRLTDIGWGTRLRELLADSAPDQPVPDEVFAACVQVLAAWRWAERPTGV
VAIGSRRRPQLVSSLARRLAEIGRLTYLGAVVSGGEGSLRSNSAQRLAGLWQGLSLPAGL
TPDGPVLLVDDLVDSGWTMTLATKLVREAGAPAVLPFALAATN
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
gtggggtatgcatggggtgtggacgaactcgcactgcgcgacctcgccgaggaacggctc
cgggcactggccggtccggaggcgagactgcgcgaggaccagtggaccgccatcagcgcg
ctggtctcgcagcgccgccgcgcgctggtggtgcagcgcaccgggtggggcaagtccgcg
gtctacttcgtggccaccgcgctgctgcgcgcgctgggcgaggggcccacggtgatcgtc
tccccgttgctggcgctgatgcgcaaccaggtcgcggccgcggcgcgggccggggtgcac
gcggcgaccatcaactccgccaacaccaccgagtgggaccaggtccagcagtcggtcgcc
gatggcgaggtggacgtgctgctggtgagcccggaacggttgaacaacccggacttccgg
gacgcggtgctgccctcgctgacggcgagcgcgggcctgctcgtggtggacgaggcgcac
tgcatctccgactggggccacgacttccgccccgactaccggcggctgcgcaccctgctg
gccgggctgccggacggggtgccggtgctggccaccacggccaccgccaacgaccgggtg
gtgcacgacgtcaccgaccagttgggcatcggcgcgggcaacgagtccaccctggtgctg
cgcgggccactggaccgggagagcctgcacctggccgtggcccggctgcccagcaccgag
gcacggctgggctggctcgccgagcggctgccggagctgcccggttccgggatcatctac
acgctgaccgtgtcctccgccgaggacgtggccgcgttcctgcgcgagcgcgggttcgcc
gtggcctcctactcgggcaagaccgatccggccgagcgcgagcaggccgagtcggacctg
ctggccaaccgggtcaaggcgctggtggccacctcggcgctgggcatgggtttcgacaag
ccggacctgggttttgtcgtgcacctgggcgccccgcagtcgccgatcgcctactaccag
cagatcggccgcgccggtcgcggggtgcgccgggccgaggtggtactgctgcccggccgc
gaggaccgcgagatctggaactacttcgcctcactggcgttccccccggaacccgttgtg
cgccaagtgctcgacgcgctggccaacgcgggccgcacgctgtccaccgcggcgctggag
ccgatggtggagctgtccaggagccgcctcgaggtggtgctcaaggtgctcgacgtggac
ggggcggtgcgtcgcgtgcgcgggggctgggagtccaccgggcagccgtggcagtacgac
gcgcagcgctacgggcgcatcgcgcaggcgcggtccgccgagcagcaggcgatgctcgac
tacctggacacgacgggctgtcgcatggagttcctgttgcggcagttggacgatcccgcc
gcggccccctgtgggcgctgcgacaactgcaccggccgcggttggtccaccgaggtgtcc
gagtcggccgcctcctcggcccgcgaccggctgcggcggcccggggtggagctgcccgcc
cggcggcagtggcccagcggcatgtccgcgctgggcgtaccgctcagcggcaagatcggc
cccgcccaggtcgccgccgagggccgcgtgctgggtcggctcaccgacatcggctggggc
acccggctgcgtgaactgctcgccgactccgcgcccgaccagccggtgccggacgaggtg
ttcgccgcctgcgtgcaggtgctggccgcctggcgctgggcggagcggccgaccggggtg
gtcgccatcggctcacggcgccgcccgcaactggtgtccagcctggcccggcggctcgcc
gagatcggtcggctgacctacctcggtgccgtggtctccggcggcgagggcagtctgcgc
tccaacagcgcccagcggctcgccgggctctggcaggggctgagcctgcccgccgggctg
acgcccgacgggcccgtgctgctcgtcgacgacctggtggacagcgggtggaccatgacc
ctggccacgaagctggtgcgtgaggcaggagcccccgccgtcctgcccttcgccctggcg
gcgaccaactga
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