Kangiella aquimarina: SR900_05460
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Entry
SR900_05460 CDS
T09621
Name
(GenBank) AlkA N-terminal domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
kam
Kangiella aquimarina
Pathway
kam03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
kam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SR900_05460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kam03000
]
SR900_05460
03400 DNA repair and recombination proteins [BR:
kam03400
]
SR900_05460
Enzymes [BR:
kam01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
SR900_05460
Transcription factors [BR:
kam03000
]
Prokaryotic type
Helix-turn-helix
AraC family
SR900_05460
DNA repair and recombination proteins [BR:
kam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SR900_05460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
OGG_N
Motif
Other DBs
NCBI-ProteinID:
WQG86334
UniProt:
A0ABZ0X7M0
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All DBs
Position
complement(1152861..1154246)
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AA seq
461 aa
AA seq
DB search
MLKAATIKTYQQARLARDPRYDGAFFVAVKSTGIYCRPICPAPAPKEQNVTYYQSSVQAQ
EAGYRPCLRCRPETAPQSSAWLGNQAVLRKAVSRIQAGALNQRSLKDFSESMGITDRYLR
KLFQEHLGVSPITYANHLRLMFAKQLLHQTQLPITDIAFIAGFNSVRRFNDSFKATMQLS
PSQLRKTLINKRSDTDQQAIQLKLHYRPPYDWSLMHDFLQQRELSAIETVTETTYSRSFS
LESCRGFFSAKHDSDDSCFQVAIELDDMSKLLEVTHHIRRVFDLNSDLEVIESSLAQDKA
FKPLIKSGLRLPACWDTFEAGVKAILGQQVSVKAAYTHTASVIEQLGSNYNHQYKLFPTA
QQIVDGDLSFLKMPNSRKQTLHNFAQWYLDTQGEDLSSILNIKGIGPWTYAYIKLRSGMD
SDAFPEKDLGVIKAMEKYQLTSSETWQPWRSYATLQLWHSL
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaagcggcaacgattaaaacctaccagcaagcacgtctggcacgcgacccgcgc
tatgatggggctttctttgtggctgttaaaagcaccggtatctattgccgcccaatctgt
cctgcgcctgctccaaaggagcagaatgtcacctattaccaaagctcggttcaggctcag
gaagccggctaccgcccatgcttacgctgtcgaccagaaacagcaccacagtcgtcggca
tggctgggcaatcaagccgtgctcagaaaggcagtctcacgcattcaggctggagcctta
aatcagcgctcactgaaagacttcagcgaatcaatgggcattactgatcgctacctccgt
aaactgtttcaggaacaccttggggtttcaccgattacctatgccaaccacttgcgcctg
atgtttgccaaacaactgctccaccagacccagctaccgattaccgatatagctttcata
gcgggatttaacagcgtccgccgcttcaatgacagctttaaagcaaccatgcaactgagc
ccgagtcagttgcgcaaaactctaatcaataaaagaagtgacactgaccagcaggcgatt
caacttaaacttcattaccgtccgccctatgactggtcactgatgcatgattttttgcaa
cagcgcgaactatcagccatcgaaacagtaaccgagaccacatacagccgaagctttagt
cttgaaagttgcagagggttcttttcagccaaacacgactcagatgactcatgcttccag
gtggctattgaattagacgacatgagtaaacttttggaagttacccatcatatacgtcgt
gtattcgatctaaacagcgaccttgaagtcatagaaagctcattggcacaagacaaagca
tttaaaccattaattaaatcaggactgcgtcttcctgcctgctgggatacctttgaagca
ggcgttaaagccattctggggcagcaagtttctgtcaaagcggcttacactcacaccgca
agcgtcatcgaacagttgggcagcaactacaatcaccagtacaaactgtttccaacagcg
cagcaaatcgtcgatggcgatttaagctttttgaaaatgccaaacagccgcaaacagacg
ctgcataattttgcgcagtggtatctcgatactcaaggcgaagatttatcgtcaatactc
aacatcaaaggcataggcccctggacctatgcgtacattaaattaagaagcggcatggat
agcgatgctttcccggaaaaagatcttggcgtcattaaggccatggaaaaatatcaactt
acaagcagtgaaacgtggcagccctggcgcagttacgccaccttgcaactgtggcacagc
ctttaa
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