Kordia antarctica: IMCC3317_47280
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Entry
IMCC3317_47280 CDS
T06371
Symbol
carH
Name
(GenBank) HTH-type transcriptional repressor CarH
KO
K22491
MerR family transcriptional regulator, light-induced transcriptional regulator
Organism
kan
Kordia antarctica
Brite
KEGG Orthology (KO) [BR:
kan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kan03000
]
IMCC3317_47280 (carH)
Transcription factors [BR:
kan03000
]
Prokaryotic type
Helix-turn-helix
MerR family
IMCC3317_47280 (carH)
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GFIT
Motif
Pfam:
MerR_1
B12-binding_2
MerR
Alpha-mann_mid
Motif
Other DBs
NCBI-ProteinID:
QHI39318
UniProt:
A0A7L4ZRJ7
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Position
complement(5467781..5468677)
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AA seq
298 aa
AA seq
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MDCVKTKFSIKDLENLSGVKAHTIRIWEKRYELLAPERTDTNIRTYDIKSLQKLLNITLL
YKNGYKISKIADIPENEIHILVREIATDNNVHNEALNSFKLSMLNFDYSLFNNTYTELLL
EKSFREIFYDTFIPLLNEIGVLWHTNTINPAHEHFISSLIKQKVIFNTERIQSIKKSKKS
KTFVLFLPENEIHEIGLLYLNYELQLKGYHTIYLGQTIPIDSLTTIKNYFPNSHFISYFT
VTPPENRIEEYLQEFNDKVGFKDHHLWLLGYQAKNVKNDKNHKNLKVFKSITELVEEI
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggactgtgttaagactaaatttagcatcaaagacttagaaaatctttcaggagttaag
gcgcatacaattcgcatatgggaaaaaagatatgaattgttagcaccagaaagaactgac
acaaatatccggacgtacgatattaaaagtttacaaaaacttctcaacatcacattactt
tataaaaatggttataaaatttctaagatagctgatattcctgaaaatgaaattcacatt
ttagttcgggaaatagcgactgataacaatgtccacaacgaagcgttgaattcttttaaa
ctttcaatgcttaatttcgattatagtctattcaacaatacctatactgaattactcttg
gagaaatcctttagagaaattttttatgatacatttattcctttattgaatgaaattggc
gtgttgtggcatacaaatacgatcaatcctgcgcatgagcatttcatctctagtttgata
aaacaaaaggttatttttaacacagaacggattcaatccattaaaaaatcaaaaaaatca
aaaacatttgtgctttttttaccagaaaatgaaattcacgaaattggtttgttgtacttg
aattacgaattgcaactcaaaggatatcatactatttatttaggacaaacaattccaata
gacagtttgacaactattaaaaattattttccaaattcgcattttatctcttactttacg
gtcactccaccagaaaatcggatagaagagtatcttcaagaatttaatgacaaagttggc
ttcaaagatcatcatttatggcttttgggctatcaggcaaaaaacgtgaagaacgataaa
aaccacaaaaatcttaaagtttttaaatcaataacggaattagttgaagaaatttag
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