Kaistella sp. 97-N-M2: L0B70_07500
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Entry
L0B70_07500 CDS
T08605
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
kaq
Kaistella sp. 97-N-M2
Pathway
kaq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
kaq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
L0B70_07500 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kaq03021
]
L0B70_07500 (rpoB)
03400 DNA repair and recombination proteins [BR:
kaq03400
]
L0B70_07500 (rpoB)
Enzymes [BR:
kaq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
L0B70_07500 (rpoB)
Transcription machinery [BR:
kaq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
L0B70_07500 (rpoB)
DNA repair and recombination proteins [BR:
kaq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
L0B70_07500 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
UJF28713
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All DBs
Position
1572974..1576801
Genome browser
AA seq
1275 aa
AA seq
DB search
MSKSKAVAKAQGNERINFSIAKGKIETPDFLDIQIQSFKDFFQLDILPEQRLNESLYKTF
QENFPITDSRNNFVLEFLDYLVDSPRYSIDECVERGLTYSVPLKARLKLYCTDPEHEDFQ
TVVQDVYLGPVPYMTPSGSFIINGAERVIVTQLHRSPGVFFGQTYHANGTKLYYSRIIPF
KGSWMEFTTDINNVMYAYIDRKKKLPLTTLLRAIGFESDKDILQIFDLAEEVKVSKAALK
KVEGRTLAARVLNTWFEDFVDEDTGEVVSIERNEIILDRETILEKEHLDLILEAGVKSIL
IHKENSNEFSIIQNTLQKDPTNSEKEAVEYIYRQLRNADPPDEETARGIIEKLFFSEQRY
SLGEVGRYRLNKKLGLNIPEKTEVLTKEDIISIVRHLIELVNAKAEVDDIDHLSNRRIKT
VGEQLSGQFSVGLSRIARTIRERMNVRDNEIFTPIDLVNAKTLTSVINSFFGTNQLSQFM
DQTNPLSEITHKRRLSALGPGGLSRERAGFEVRDVHHTHYGRICPIETPEGPNIGLISSL
GIYAKINSLGFIETPYRKVNNGKVDLKTAAVFLNAEDEEDKVIAQANVEMKEDGTISTDR
VIARLDGDYPVVEPQQVDLIDVAPNQISGISASLIPFLEHDDANRALMGSNMMRQAVPLL
KPEAPIVGTGLEQQVAKDSRILINAEGNGTVEYVDADKITIKYDRSEDSDLISFDSATKS
YKLTKFRKTNQGTTITLRPNVRVGDKVHLGQVLCDGYATENGELALGRNLVVAFMPWKGY
NFEDAIVINEKVVREDWFTSIHVDEYSLEVRDTKLGMEELTADIPNVSEEATKDLDENGM
IRIGADVKPGDIMIGKITPKGESDPTPEEKLLRAIFGDKAGDVKDASLKADSSLRGVVIN
KKLFSRNIKDKKKRSEEKLKLEEIENTYKAKFDELRNLLLEKLGTLVNGKTSQGVNNDLD
EEIIGKGVKFTTKLLQSVEDYVNVSGADWTVDADRNELIKQLIHNFKIKSNDLNGVKNRE
KFAISIGDELPAGIIKLAKVYVAKKRKLNVGDKMAGRHGNKGIVSRIVREEDMPFLEDGT
PVDIVLNPLGVPSRMNIGQIYETVLGWAGQKLGLKFATPIFDGANIDQITEYTNQAGLPE
FGSTHLYDGGTGERFTQPATVGIIYMLKLGHMVDDKMHARSIGPYSLITQQPLGGKAQFG
GQRFGEMEVWALEAFGASNILREILTVKSDDVIGRAKTYEAIAKGEAMPEPGIPESFNVL
LHELQGLGLDVRLEE
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaatctaaagcagtcgctaaagctcaggggaacgaaagaatcaacttttccata
gctaaaggaaaaattgaaactcctgactttttggacattcagatccaatctttcaaagat
tttttccagttggatatccttccggagcagagactcaacgaatctctgtacaaaaccttt
caagaaaatttcccaattaccgattcccggaacaattttgttctcgaatttttggattat
ttggtagattctccacgatactccatcgacgagtgtgtggaaagaggattgacgtattca
gttcctcttaaagccagactaaaactctattgtaccgatcctgaacatgaagattttcag
accgttgtacaggatgtttatttaggtccggttccttatatgacgccttccggttcattt
attattaatggtgccgaacgtgttattgtaacgcagttgcacagatctccgggtgtgttc
tttggtcaaacttatcatgccaacggaacgaagttgtattactccagaatcatccctttc
aaaggatcctggatggaatttacaaccgacatcaacaacgtaatgtacgcttacatcgac
cgtaagaaaaaattaccgttaacaactttattaagagcaatcggcttcgagtccgataaa
gacatccttcagattttcgaccttgccgaagaagtaaaagtttctaaagcagcattgaaa
aaagtagaaggccgtactttggctgcgagagttttgaacacctggtttgaagatttcgtg
gacgaagacacgggtgaagtagtttctatcgaaagaaacgagatcatcctggatagagaa
accattcttgaaaaagaacatttagatcttattcttgaagcgggcgtgaaatcaatttta
attcacaaagaaaattccaacgaattctctatcattcagaatactttacaaaaagatcca
accaactccgaaaaagaagcggttgaatatatttaccgtcagttgcgtaatgcagatccg
ccagatgaagaaactgccagaggaattatcgaaaaattattcttctccgagcagcgttat
tccttaggtgaagtaggacgttacagactgaacaaaaagttaggattaaatattccggaa
aaaacagaagttttaacgaaagaagatattatttccatcgttagacatcttattgaattg
gtaaacgcgaaagcggaagtcgatgatattgatcacctttcaaacagacgtattaaaacc
gttggcgagcagctgtcaggacaattcagtgttggactttccagaatcgcgagaacgatt
agagagagaatgaacgttagagataacgagatttttactccaatcgatttggtaaacgca
aaaaccttaacctctgtaattaattctttcttcggaacgaatcagttatcgcagttcatg
gatcaaaccaatccattatcagagatcacgcacaagcgtagactttctgccctaggacct
ggtggattatccagagaaagagcaggttttgaggtgcgcgacgttcaccatacgcactac
ggcagaatttgtccgatagaaactcccgagggaccaaacattggtttgatctcttccctt
ggtatttatgcaaaaatcaacagtttaggatttatcgaaacaccttacagaaaagtaaac
aacggtaaagttgatcttaaaaccgcagcggttttccttaatgctgaagatgaagaagat
aaagtgatcgcacaggccaacgttgaaatgaaagaagacggtacaatttctaccgacaga
gtaattgcgcgtttagatggcgattatcctgtggtagagccgcaacaggttgatttgatc
gatgttgcaccgaaccagatctccggtatttctgcgtccttaattccgttcctggagcat
gatgatgcgaacagagcgttgatgggatccaatatgatgcgtcaggcagttccattgttg
aaaccggaagcaccaatcgtgggtacaggtcttgagcagcaggttgcgaaagattccaga
atcctgatcaatgcagaaggaaacggtaccgtagaatatgtggatgcagataagattacc
attaaatatgacagaagcgaagacagtgatttaatttcattcgattctgctacgaaatcc
tacaaactgaccaaattccgtaaaacgaatcagggcacaaccattactttgagaccaaac
gtaagagtaggtgataaagttcatttaggacaggttctttgtgacggttatgcgactgaa
aacggcgaattggcacttggacgtaacttagttgttgccttcatgccttggaaagggtac
aactttgaggatgcgatcgttattaacgaaaaagtagtccgcgaagactggtttacctcc
atccacgttgatgaatattctttggaagttcgggataccaaattaggtatggaagaatta
accgcagatattccaaacgtttcggaagaagcgacaaaagatttagatgaaaatggaatg
atcagaattggcgccgatgtaaaacctggcgacattatgattggtaagattactccaaaa
ggagaatccgatccaactccggaagaaaaattattgagagcgatttttggcgacaaagcc
ggagacgtgaaagatgcttccctgaaagcagattcatcgttacggggagttgttatcaac
aaaaaattgttctccagaaatatcaaagacaaaaagaaaagatctgaagagaaactgaaa
cttgaagaaatcgaaaacacgtacaaagcgaaattcgacgaattaagaaatctgttactt
gaaaaattaggaacgcttgtgaacggtaaaacgtctcagggtgttaataatgatcttgat
gaagaaatcatcggaaaaggcgtgaaatttaccacaaaattacttcaatctgttgaagat
tatgtgaacgtaagtggcgcagactggaccgtagatgcagaccgtaacgagttgatcaaa
caattgatccacaacttcaaaattaagtcgaatgacttaaacggtgttaaaaaccgtgag
aaatttgcgatctctattggagatgagcttcctgcaggaatcattaaacttgcgaaagtg
tatgtggcgaaaaaacgtaaacttaatgtaggagataaaatggcgggtcgtcacggtaac
aaggggattgtatcccgtattgttcgtgaagaagatatgccgttcctggaagacggaact
ccggttgatatcgttttgaatccactgggtgtaccttcccgtatgaacattggtcagatt
tacgaaaccgttttaggatgggctggtcaaaaattaggattgaaatttgccacgccgatc
ttcgatggtgcaaacatcgaccagattacagaatacacaaaccaggcgggattaccggaa
ttcggaagtacgcatctttatgatggtggtaccggagaaaggtttactcaaccggcaact
gtgggtatcatttatatgttgaaactgggtcacatggttgatgataaaatgcacgcgcgt
tctatcgggccatattcccttattacgcagcagcctttgggtggtaaagcgcagtttggg
ggccaaagatttggtgagatggaggtttgggcactcgaagcatttggtgcctcgaatatc
ctaagagaaatcttaaccgtgaaatccgacgacgttattggtagagcgaaaacttatgaa
gcaattgcaaaaggagaagcaatgcctgaaccaggtattccggaatccttcaacgtattg
ttacatgagttgcagggtcttggtcttgatgtaagacttgaagaataa
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integrated database retrieval system
