Kozakia baliensis: A0U89_09855
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Entry
A0U89_09855 CDS
T04547
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
kba
Kozakia baliensis
Pathway
kba03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
kba00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A0U89_09855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kba03021
]
A0U89_09855
03400 DNA repair and recombination proteins [BR:
kba03400
]
A0U89_09855
Enzymes [BR:
kba01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A0U89_09855
Transcription machinery [BR:
kba03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
A0U89_09855
DNA repair and recombination proteins [BR:
kba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
A0U89_09855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
DUF6218
Bac_rhamnosid_C
DOCK-C2
Motif
Other DBs
NCBI-ProteinID:
AOX17391
UniProt:
A0A1D8UUR6
LinkDB
All DBs
Position
complement(2115938..2120113)
Genome browser
AA seq
1391 aa
AA seq
DB search
MNAITKSFTGRKRIRKSFGRIPEVAPMPNLIDVQRASYETFLQMNVAPDSRQQTGLQEVF
RSVFPINDFAGRGRLEFVSYELEEPKYDVEECIQRGLTFAAPLKVILRLIVWDVDEDTGS
RSIRDIKEQPVYMGDMPLMTDNGTFIINGTERVIVSQMHRSPGVFFDHDKGKTHSSGKYL
FAARVIPYRGSWLDFEFDAKDLIYVRIDRKRKLPVTTLLYALEGEHSIAARAAKAAEGGD
VDALDVRGMDQDEILSYFYEAVPFTRMPKGWARPFDPDAFRGLKLLEPLYDADTGEVVAE
AEAKLTARMVRKIAENTRVVLVGRADLLGRFVAHDLVNENTGEIYAEAGEELTEARLAAL
EEAGVTELPVLSVDGAHGPWIRNTLAVDKNNNRDDALIDIYRIMRPGEPPTPETAEAMFR
GLFFDPDRYDLSAVGRVKMNMRLEVDAPDTLRVLRKEDILRTVKIMCELKDGRGQIDDID
NLGNRRVRSVGELMENQYRVGLLRMERAIRERMGSVDVDTVMPHDLINAKPAAAAVREFF
GSSQLSQFMDQTNPLSEVTHKRRLSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEG
PNIGLINSLSTYAKVNKYGFIETPYRLVKDGMLQDGWKYLSAMEEDKLIVAQADAKQDKD
SGRLTDELVSVRRSGDFRLVPPEQVTACDVSPKQLVSVAAALIPFLENDDANRALMGSNM
QRQAVPLVRADAPLVGTGMEAAVAHDSGATIVARRRGIVDQIDGARIVVRATDEAGSTQG
VDIYRLRKYMRSNQSTCINQRPLVRVGDTVHSGDIIADGPSTELGELALGRNVLVAFMPW
NGYNFEDSILISERIARDDVFTSIHIEEFEVMARDTKLGQEEITRDIPNVGEEALRNLDE
AGIVYVGAEVNPGDILVGKVTPKGESPMTPEEKLLRAIFGEKASDVRDTSLKLPPGTTGT
IVDVRVFSRRGIDKDERAMAIERAEIERLTKDRDDERAIQERSFINRLRERLLNQTAGAG
FKGIKSGTVITDEVLDEHPRGAWRNIVVADDSVMSEIETLRREFDAAVGKIQARFDSKVE
KLQRGDELPPGVMKMVKVFVAVKRKLQPGDKMAGRHGNKGVVSRVVPVEDMPFLEDGTAV
DIVLNPLGVPSRMNVGQILETHLGWACANLGQDIGRLADNYQRTGEKKQELLDRLRDVYG
DAIYETDVATLPNEQLMELSNNLRKGVPIATPVFDGASIPDIEDMLTKAGVDKSGQSQLI
DGRTGEPFERKTTVGYIYMLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEM
EVWALEAYGAAYTLQEMLTVKSDDVSGRTKVYEAIVREHDDFEAGIPESFNVLIKELKSL
GLNVDLEQSAL
NT seq
4176 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgatcaccaaatcgttcacaggacgcaagcgtatacgcaaaagctttgggcgt
attcccgaagtggcgccaatgcccaacctgatcgatgtgcagcgcgccagttatgagacg
ttccttcagatgaacgtggcgcctgacagccgtcagcagacgggcttgcaggaagttttc
cgctcggttttcccgatcaacgattttgccgggcgtggtcgtcttgagttcgtttcctac
gaactcgaagagccgaaatacgatgttgaggaatgcattcagcgtggcctgacttttgct
gcgcctttgaaagtcattctgcgcttgatcgtatgggacgtggatgaggatacgggctcc
cgttcgatccgcgatatcaaggagcagccggtttacatgggcgatatgccgctcatgacc
gataacggcaccttcatcatcaatggcaccgagcgtgtgatcgtcagccagatgcatcgc
agcccgggcgtgttcttcgatcacgataagggcaagacgcattcttctggcaaatatcta
tttgccgcgcgtgtgattccgtatcgtggctcctggctggatttcgaattcgacgccaag
gatctgatttacgtccgcatcgatcgtaagcgtaagctgccggtcaccacgctgctttat
gcgttggaaggcgaacattcgatcgcggctcgcgcggcgaaggcggctgagggcggtgac
gtcgatgcgctcgatgtccgtggcatggatcaggatgaaatcctgagctatttctacgaa
gcggtgccgttcacgcggatgccgaagggctgggcgcgtccgttcgatcccgatgcattc
cgtggcctgaaactgcttgagccgctttatgacgcggatacgggcgaagtcgtggcggaa
gccgaggcgaagctgacagcgcgcatggtgcgtaagatcgccgagaacacccgcgttgtg
ctcgtcggtcgtgccgacttgctgggccgcttcgtggcgcatgatctggtcaacgaaaat
accggcgagatttacgccgaagcgggcgaagagctgaccgaagcgcggcttgctgcgctt
gaggaggcgggcgtgaccgaattgccggttctgtccgtggacggcgcgcatggcccatgg
atccgcaatacgcttgcggtcgataagaacaataaccgcgacgacgcgctgatcgacatt
tatcgtatcatgcgtccgggcgagccgccgactccggagacggcggaagccatgttccgt
ggcctgttcttcgatccagaccgttacgatctttccgcggttggccgcgtgaagatgaac
atgcgcttggaagtcgatgcgccggatacgctgcgtgtgctgcgtaaggaagacatcctg
cgcacggtcaagatcatgtgcgagttgaaggacggtcgcggtcagatcgatgacatcgac
aatctcggtaaccgtcgtgtgcgttccgtcggcgaattgatggaaaatcaatatcgcgtc
ggtctgttgcgcatggagcgcgcgatccgcgagcgtatggggtcggtcgatgtcgatacg
gtcatgccgcacgatcttatcaatgcgaagccggctgccgctgctgtgcgtgagttcttc
ggctcctcgcaactcagccagttcatggatcagaccaatccgctttccgaagtgacgcat
aagcgtcgtctttcggcgcttggcccgggcggtttgacacgtgagcgcgcaggcttcgag
gtgcgcgacgttcatccgacgcattatggtcgtatttgcccgattgagacgccggaaggc
ccgaatatcggccttatcaactcgctgtccacctatgccaaggtgaacaaatacggcttc
atcgaaactccgtatcgtctcgtgaaggacggcatgcttcaagatggctggaaatatctt
tctgccatggaagaggacaaactgatcgtcgcgcaggctgatgcgaagcaggataaagac
tccggtcgcctgaccgacgaattggtgtccgtccgtcgttcgggcgacttccgtctggtg
ccgcccgagcaggtgacggcttgcgacgtttctccgaagcagctcgtctcggttgccgcg
gcgttgattccgttccttgagaacgatgacgcgaaccgcgcactgatgggctcgaacatg
cagcgtcaggccgttccgttggtgcgcgccgatgcgccgctggtcggaacaggcatggaa
gccgccgtggcgcacgattccggtgccaccatcgtggcgcgccgccgtggtattgtcgat
cagatcgacggtgcgcgtatcgtggtgcgcgcgacggacgaagctggttcgacccagggt
gtcgatatttatcgtctgcgcaaatatatgcgttcgaaccaatccacctgcatcaaccag
cgtccgctggtgcgcgtgggcgatacggttcattcgggcgatatcattgcggacggcccg
tccaccgagttgggtgaattggcgctgggccggaacgtgctcgtcgcgttcatgccttgg
aacggctacaactttgaggattccatcctcatttccgagcgtatcgcccgcgacgacgtc
ttcacctcgatccatatcgaggaattcgaagtcatggcgcgtgacaccaagctcggccag
gaagaaatcacccgcgacattccgaatgtgggtgaggaagcgctgcgcaacctcgacgag
gcaggcatcgtctatgtcggcgcggaagtgaacccaggcgatattctcgtcggtaaggta
acgccgaagggcgaaagcccaatgacgccggaagaaaagcttctgcgcgccatcttcggt
gaaaaagcttcggatgtgcgtgacacgtctcttaaactgccgccgggcacgacaggcacg
atcgttgatgtgcgcgtgttctcacgccgcggtatcgacaaagacgaacgcgcaatggcg
atcgagcgcgccgagattgagcgcttgaccaaggaccgcgacgacgagcgtgccattcag
gagcgtagcttcatcaaccgcctgcgcgagcgtttgctcaaccaaacggcgggtgcgggc
ttcaagggcatcaagtccggcacggtcatcactgatgaggtgctcgacgaacatccgcgt
ggtgcatggcgcaatatcgtcgttgccgacgatagcgtgatgtccgaaatcgaaacgctc
cgtcgcgagttcgatgcggcggtcggtaagatccaggcgcgtttcgatagcaaagtcgag
aagcttcaacgcggtgacgaattgccgccaggcgtcatgaagatggtcaaggtgttcgtg
gcggtgaagcgcaagcttcagccgggcgataagatggccggacgtcacggtaacaagggt
gtcgtttcccgcgtggtgccggttgaggacatgccgttccttgaagatggcacggcggtc
gatatcgtgttgaacccgctcggcgtgccgtcgcgcatgaatgtcggtcagattctcgaa
acccatctgggttgggcttgcgccaatcttggccaggatatcgggcgtttggcggacaat
tatcagcgcacaggtgaaaagaagcaggaactcctcgaccgcttgcgtgacgtttatggc
gatgccatctacgagacggacgttgccacgcttccgaacgagcagttgatggaactgtcc
aacaacctccgtaaaggcgtgccgatcgcgacgccggtgttcgacggtgcgtcgatcccg
gatatcgaggacatgctgacaaaggcgggtgtggataaatccggtcagtctcagctcatt
gacggtcgcaccggcgagccgttcgagcgtaagaccacggtcggctacatctatatgttg
aagctgcatcaccttgtggacgataagatccacgctcgctcgatcggtccttactcgctg
gttacgcagcagccgctgggtggtaaggcgcagttcggtggacagcgcttcggtgagatg
gaagtgtgggcgctcgaggcttacggtgcagcgtacacgttgcaggaaatgcttacggtt
aagtctgacgacgtgtcgggccgcaccaaggtttacgaagcgatcgtgcgtgagcatgac
gatttcgaagccggcattccggaaagcttcaacgtgctcatcaaagagctcaaatcgctt
ggcctgaacgtcgatctggagcagagcgcgctgtaa
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