Ktedonobacteria bacterium brp13: ccbrp13_49480
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Entry
ccbrp13_49480 CDS
T09592
Symbol
rpoA_2
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
kbb
Ktedonobacteria bacterium brp13
Pathway
kbb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
kbb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ccbrp13_49480 (rpoA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kbb03021
]
ccbrp13_49480 (rpoA_2)
03400 DNA repair and recombination proteins [BR:
kbb03400
]
ccbrp13_49480 (rpoA_2)
Enzymes [BR:
kbb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ccbrp13_49480 (rpoA_2)
Transcription machinery [BR:
kbb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ccbrp13_49480 (rpoA_2)
DNA repair and recombination proteins [BR:
kbb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ccbrp13_49480 (rpoA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
Msap1
Motif
Other DBs
NCBI-ProteinID:
BCL82483
LinkDB
All DBs
Position
6084595..6085581
Genome browser
AA seq
328 aa
AA seq
DB search
MLDIALPRIKNTKTQGNYASYDIEPLEAGYGMTLGNSLRRVLLSSLPGAAVTSIRIEGVQ
HEFQDIPNVMEDVTDIVLNIKRLRLRCFSDHPVSMRLEISGEREVTAADIVAIAPSAIEI
VNPELHIATLDNENARLDMELVVETGRGYVPADSKDDQPIGVIPVDAIYSPVQKVNYAVE
HTRVGQMTNFDKIVLEITTDGTITPDEALRQSADILVRHFTLLATYRAQPVEIERPPLSS
LPIPQKIYDTPIEELDLSVRAYNCLKRSNITKVGQVLSMNEEDLLGVRNFGEKSLQELRE
RLLARNFLPNPRTSTVGADLDGDHEMEE
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
ttgctagatattgcactgcctcgcataaagaataccaagacacagggcaactatgcgagc
tatgatattgaaccgttagaggctgggtatggtatgaccctgggcaactctctgcgacgc
gttctgctgtcttcgttgcccggcgcggctgtaacctcaattcgtatcgagggggtgcaa
cacgagtttcaggatatcccgaatgtgatggaagatgtcactgatatcgtcttgaacatc
aagcgcttgcgtctgcgctgtttctctgaccatcccgtttcgatgcgtctggagatcagc
ggtgagcgcgaggtgacggctgccgatattgtggctatcgctcctagcgcaattgagatt
gtgaatcctgaactgcatattgcgacgctcgataatgagaacgcacgcctcgacatggag
ctggtcgtggagactggcagaggctatgttcctgccgactcaaaagatgatcagcccatt
ggggttatccctgttgatgctatctattcgcctgtgcaaaaagtgaattatgctgttgag
cacacgcgcgtagggcagatgacgaattttgataagattgttctggaaattacgacggat
ggcacgattacgcctgatgaggcgttacgccagagtgcggatattctggtgcggcatttt
actttgctcgccacttatcgcgctcagccggttgagattgagcgtccaccgctgagtagt
ttgcccatcccgcagaagatctatgatacgccgattgaagaactggacctttcggtgcgc
gcttataactgcttaaagcgtagcaatattacgaaggtgggccaggttctctcgatgaat
gaagaagacctgcttggtgtacgcaatttcggtgagaagagtttgcaggaactgcgtgag
cgcctgctggcaagaaatttcttgcctaatccccgcacgagtaccgtcggagccgacttg
gacggcgatcacgaaatggaggaataa
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