Kwoniella botswanensis: 90012497
Help
Entry
90012497 CDS
T11304
Symbol
L199_001510
Name
(RefSeq) pre-mRNA-splicing factor CLF1
KO
K12869
crooked neck
Organism
kbo Kwoniella botswanensis
Pathway
kbo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
kbo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
90012497 (L199_001510)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
kbo03041
]
90012497 (L199_001510)
03036 Chromosome and associated proteins [BR:
kbo03036
]
90012497 (L199_001510)
Spliceosome [BR:
kbo03041
]
Complex B
Other components
Prp19-related factors
90012497 (L199_001510)
Complex C
90012497 (L199_001510)
Chromosome and associated proteins [BR:
kbo03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
90012497 (L199_001510)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
TPR_14
HAT_Syf1_CNRKL1_C
HAT
Suf
TPR_19
TPR_2
TPR_8
TPR_CcmH_CycH
HAT_Syf1_M
TPR_12
SNAP
TPR_16
TPR_15
Mad3_BUB1_I
U3_assoc_6
Motif
Other DBs
NCBI-GeneID:
90012497
NCBI-ProteinID:
XP_064743335
LinkDB
All DBs
Position
1:complement(join(3987908..3988113,3988170..3988311,3988367..3988750,3988802..3988981,3989029..3989144,3989193..3989517,3989563..3990048,3990099..3990205,3990258..3990420,3990476..3990541))
Genome browser
AA seq
724 aa
AA seq
DB search
MSGRDARDRAPRVKNRAPAAVQITAEQLLREAQERQEPSIQAPKQRVQDLEELSEFQGRK
RNEFEGRIRYSRDSIRAWIKYAQWESSQNEFERARSVFERALDVDPRSTELWLKYTDMEL
KARNINHARNLYDRAVTLLPRVDALWYKYVYLEELLLNVPGARQIFERWMQWEPNDKAWQ
SYIKLEERYNELDRASAIYERWIGVRPIPKNWVIWAKFEEDRGQPDKAREVFQTALEFFG
DEEEQVEKAQQVFAAFARMETRLKEYERARVIYKFALARLPRSKSASLYAAYTKFEKQHG
DRAGVELTVLGKRRIQYEEELAYDGTNYDAWFSLARLEEDAYRADKEDGEDVEPTRVREV
YERAVANVPPALEKRYWRRYIYLWLQYAAFEEIDTKDFGRARDVYKAAIKLVPHKTFTFA
KLWLAYAYFEIRQLDVTAARKVLGAGIGMCPKPKLFSGYIELEMRLREFDRVRTLYEKFL
TYDPSLSSAWIQWTQVESAVEDFERVRAIFELAVQQALDMPEIVWKAYIDFESGEGERER
ARSLYERLLERTSHVKVYISYALMEVSVLGGGEDEDGNEIEGEAGDPELARAVFARGYKD
LRAKGEKEDRALLLESWKSFEEQHGSPEDLAKVEEMMPTTRKRWRKAEDGSDTLEEYWDL
IFPDDERDANPTSFRFFQAAQQWAAQRGGEEGEGGLSYDLPSDSDEEDDEDEGEKDAEAM
DEDD
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcagagacgctcgtgaccgagcaccgagagtgaagaacagagccccagcggca
gttcaaattaccgccgagcaacttttgcgagaagctcaggagagacaggaaccttccatc
caggctccaaagcagagagttcaggacttagaggaactctcagagtttcaaggaaggaaa
aggaacgaatttgaagggaggatcagatattccagagacagtataagagcttggatcaaa
tatgctcaatgggaatcgagtcagaatgaattcgaaagggctagatcggtatttgagcgt
gctttggatgttgatcccaggtctactgagttatggctcaaatacactgatatggaattg
aaagcacgtaatatcaatcacgcccgaaacttgtacgacagagctgtcactctattgccc
cgagtcgatgcgttatggtataaatatgtctatctcgaagaattactgctcaacgtccct
ggtgctagacaaatattcgaaagatggatgcagtgggaaccgaatgacaaggcttggcag
agttacatcaaattagaagagaggtataacgagctagatagagcttcggcaatttatgag
agatggattggggttagaccgataccgaagaattgggtgatatgggccaagtttgaggag
gatagaggtcaacctgacaaagctagagaagtcttccaaacggctttggagtttttcgga
gacgaagaggaacaggtggagaaagcgcaacaggtgtttgcggcttttgcaaggatggaa
actaggttgaaggagtatgagagggcaagagtgatttacaagtttgccctggcacgactt
ccccgatcaaaatctgcaagcttgtacgcggcgtacaccaagttcgagaaacaacatggt
gatcgtgctggagtagaattgactgttcttgggaaacgtcgtatacagtatgaggaggag
cttgcatacgatggaacgaactacgatgcctggttctcattggctaggctggaagaagat
gcatatcgagcggataaggaagatggagaggatgtggagcctaccagagtacgagaggtg
tatgagagggcggtagcgaatgtaccgcctgctctggagaagcgatattggcgaaggtat
atctatttatggttgcaatatgccgctttcgaggagattgacacgaaggactttggtcgg
gccagggatgtatacaaagccgccatcaagctagtaccacataaaacgtttacatttgcc
aagctatggcttgcgtacgcctacttcgagattcgacaattagacgtcacggctgcccga
aaggtactaggtgctggtatagggatgtgcccaaagccaaagcttttctcaggatatatt
gagctggaaatgagattgagagaattcgatcgtgtgcgaacgctctacgagaaattcctt
acttacgacccatctctcagttccgcctggatccaatggactcaagtcgaatccgccgtg
gaagacttcgagcgtgttcgcgctatcttcgaacttgccgtacagcaagcattggatatg
cccgagattgtatggaaagcatatatcgatttcgaatctggtgaaggagagagagaacgt
gccagatcattatacgagagattgctcgaacgtacctcacacgtcaaggtgtacatctca
tacgcacttatggaagtatctgtacttggtggtggagaggatgaagatgggaatgagatt
gagggtgaagctggtgatcctgaattagcgagagctgtctttgcaagaggatacaaggat
ctcagagcgaagggagagaaggaagatcgtgcacttttgttggaatcgtggaaatcgttc
gaggaacaacatggttctcccgaagatctggcaaaggtggaagagatgatgcctactact
cgaaagagatggagaaaggcggaagatggcagcgatacgctcgaggaatattgggatctc
attttccccgatgacgagagagatgccaaccccacatctttccgattcttccaagctgct
caacaatgggctgctcaacgtggtggagaagagggagaaggtggtctatcgtacgactta
ccttcagattccgatgaggaggacgatgaagatgagggggagaaagatgcagaggcgatg
gatgaggacgattag
DBGET
integrated database retrieval system
