Streptomyces sp. NL15-2K: Q4V64_06605
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Entry
Q4V64_06605 CDS
T09250
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
kbu
Streptomyces sp. NL15-2K
Pathway
kbu00040
Pentose and glucuronate interconversions
kbu01100
Metabolic pathways
kbu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
kbu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Q4V64_06605
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Q4V64_06605
Enzymes [BR:
kbu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
Q4V64_06605
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
WKX07173
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Position
complement(1613703..1614707)
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AA seq
334 aa
AA seq
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MRSLRSTRTVPALALALLLGAAAVPAGSGSAAAQPPAPLAETSPTGFAAVNALGQNGTTG
GAGGPTVTATTTDQFLEYIDTTGPLVIRVQGTINITSKQGVRPNKTIVGVGSSGVINGGG
LDFYRSYNVIVRNIKFTNAEDDAVNVGQESHHIWIDHNEFVGAVDGAIDVVRGSQYVTVS
WNWFNKTDKSMLLGHSDGNGTQDAGKLKVSIHHNFFDGSRQRHPRVRFGEPVHVYNNYYK
GNSIYGVASTMNAGVVVEGNYFESVPHPCYSASGYDQSGPGRLVQRGNVFTGSGACETNG
TVTEPRTYYSYTLDPAADVPSLVRAGVGVGKIGT
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgaggtccttacgcagcacgcgcaccgttccggctctcgctctcgcgctgctcctcggc
gcggcggcggtgccggccggcagtggcagcgccgccgcgcagcccccggcgccgctggcg
gagacgtcccccaccggcttcgccgcggtcaacgcgctcggccagaacggcaccaccggc
ggagccggtggcccgaccgtgaccgccaccaccaccgatcagttcctggagtacatcgac
accacgggtccgctggtgatccgtgtgcagggcaccatcaacatcaccagcaagcagggc
gtgcgcccgaacaagaccatcgtcggggtcggttcctcgggcgtcatcaacggcggcggc
ctggacttctaccgctcctacaacgtcatcgtgcggaacatcaagttcaccaatgccgag
gacgacgccgtcaacgtgggccaggagtcgcaccacatctggatcgaccacaacgagttc
gtcggggcggtcgacggggcgatcgacgtcgtccgcggctcccagtacgtcaccgtgtcg
tggaactggttcaacaagaccgacaagagcatgctgctcggtcactccgacggcaacggc
acccaggacgccgggaagctgaaggtctccatccaccacaacttcttcgacggctcacgg
cagcggcatccgcgcgtgcggttcggtgagccggtgcacgtctacaacaactactacaag
gggaactccatctacggcgtggcatcgaccatgaacgcgggcgtggtggtcgagggcaac
tacttcgagagcgttccgcacccctgctactccgccagcgggtacgaccagtcggggccg
ggccggctggtgcagcgcggcaacgtcttcaccgggtcgggtgcgtgcgagaccaacggc
acggtgaccgagccgcgcacctactactcgtacacgctggacccggcggccgacgtgccc
tccctcgttcgggccggggtgggcgtcggcaagatcggcacctga
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