Kitasatospora cathayae: O1G21_22665
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Entry
O1G21_22665 CDS
T10326
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
kch Kitasatospora cathayae
Pathway
kch03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
kch00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
O1G21_22665 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kch03021
]
O1G21_22665 (rpoB)
03400 DNA repair and recombination proteins [BR:
kch03400
]
O1G21_22665 (rpoB)
Enzymes [BR:
kch01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
O1G21_22665 (rpoB)
Transcription machinery [BR:
kch03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
O1G21_22665 (rpoB)
DNA repair and recombination proteins [BR:
kch03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
O1G21_22665 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
WBP88360
UniProt:
A0ABY7Q6N7
LinkDB
All DBs
Position
5073531..5077007
Genome browser
AA seq
1158 aa
AA seq
DB search
MAAPRNASNNSAASTAPLRVSFAKIKEPLEVPNLLALQTESFDWLLGNAAWKSRVEQALE
SGQDVPTKSGLEEIFEEISPIEDFSGSMSLTFRDHRFEPPKNSIDECKDRDFTYAAPLFV
TAEFTNNETGEIKSQTVFMGDFPLMTHKGTFVINGTERVVVSQLVRSPGVYFDSTLDKVS
DKDIYSCKVIPSRGAWLEMEIDKRDMVGVRIDRKRKQSVTVLLKALGWTNEMILEEFGEY
ESMRNTLEKDHTQGQDDALLDIYRKLRPGEPPTREAAQTLLENLYFNPKRYDLAKVGRYK
LNRKLGNAESLDSGVLTEPDIIGAIKYLVKLHAGETEWRDETGRDIVVEVDDIDHFGNRR
LRNVGELIQNQVRTGLARMERVVRERMTTQDVEAITPQTLINIRPVVASIKEFFGTSQLS
QFMDQTNPLSGLTHKRRLSALGPGGLSRERAGFEVRDVHPSHYGRMCPIETPEGPNIGLI
GSLASYGRVNAFGFIETPYRKVVDGVVTEKVDYLTADEEDRYVIAQANAPLTADLHFAEP
RVLVRRRGGEIDYIPGTEIDYMDVSPRQMVSVATAMIPFLEHDDANRALMGSNMMRQAVP
LLKSEAPLVGTGMEYRCAVDAADVITAEKAGVVQEVSADYVTVANDDGTYTTYRAAKFTR
SNQGTAFNQKVLVDEGARVEVNQVLADGPCTDEGEMALGKNLLVAFMSWEGHNYEDAIIL
SQRLVQDDVLSSIHIEEHEVDARDTKLGPEEITRDIPNVSEEVLADLDERGIIRIGADVV
TGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGESGKVIGVRVFDREE
GDELPPGVNQLVRVYVAQKRKITNGDKLAGRHGNKGVISKILPVEDMPFLEDGTPVDIIL
NPLGVPSRMNPGQVLEIHLGWLAKQGWDVSGLADEWAQRLQAIGADQVAGGTNLATPVFD
GAREDEITGLLDNTTLTRDGERLVNSTGKARLFDGRSGEPFPMPVSVGYMYILKLHHLVD
DKLHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQELLTIKSDDVLG
RVKVYEAIVKGENIPEPGIPESFKVLIKEMQSLCLNVEVLSSDGQSIEMRDSDEDVFRAA
EELGIDLSRREPSSVEEV
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
ttggccgcgccgcgcaacgcctcgaacaattccgccgcatccaccgccccgctccgcgtc
tccttcgcgaagatcaaggagcccctcgaggtcccgaacctcctggccctgcagaccgag
agctttgactggctgctcggcaacgcggcctggaagtcccgggtcgagcaggcgctggag
tccggtcaggacgtccccaccaagtccggtctggaggagatcttcgaggagatctcgccg
atcgaggacttcagcgggtcgatgtccctgaccttccgcgaccaccgtttcgagccgccg
aagaactccattgacgagtgcaaggaccgcgacttcacgtacgcggctccgctcttcgtc
acggccgagttcaccaacaacgagaccggtgagatcaagtctcagacggtcttcatgggc
gacttcccgctcatgacccacaagggcacgttcgtgatcaacggcaccgagcgtgtcgtc
gtgtcgcagctggtccgctccccgggtgtgtacttcgactccaccctggacaaggtgtcc
gacaaggacatctactcctgcaaggtcatcccctcgcgtggtgcctggctggagatggag
atcgacaagcgcgacatggtcggcgtccgcatcgaccgcaagcgcaagcagtccgtcacc
gtgctgctgaaggctctcggctggaccaacgagatgattctcgaggagttcggcgagtac
gagtcgatgcgcaacaccctggagaaggaccacacccagggccaggacgacgcgctgctg
gacatctaccgcaagctgcgtccgggcgagccgccgacgcgcgaggccgcgcagacgctg
ctggagaacctgtacttcaacccgaagcgctacgacctggccaaggtcggtcgctacaag
ctcaaccgcaagctgggcaacgccgagtcgctggactccggcgtgctcaccgagcccgac
atcatcggtgcgatcaagtacctggtgaagctgcacgccggtgagaccgagtggcgcgac
gagaccggccgcgacatcgtggtcgaggtcgacgacatcgaccacttcggcaaccgccgc
ctgcgcaacgtcggcgagctcatccagaaccaggtccgtacgggtctcgcccgcatggag
cgcgtcgtgcgcgagcgcatgaccacccaggacgtcgaggcgatcacgccgcagaccctg
atcaacatccggccggtcgtcgcctccatcaaggagttcttcggcaccagccagctgtcg
cagttcatggaccagacgaacccgctgtcgggcctgacccacaagcgccgtctgtccgcc
ctcggccccggcggtctctcccgtgagcgcgccggcttcgaggtccgtgacgtgcacccc
tcgcactacggccgcatgtgtccgatcgagaccccggaaggcccgaacatcggtctgatc
gggtcgctggcctcgtacggccgggtcaacgccttcggcttcatcgagaccccgtaccgc
aaggtcgtcgacggtgtcgtcaccgagaaggtggactacctcaccgccgacgaggaggac
cgctacgtcatcgcccaggcgaacgccccgctgaccgcggacctgcacttcgccgagccg
cgcgtcctggtccgccgccgtggtggcgagatcgactacatccccggcaccgagatcgac
tacatggacgtctcgccgcgccagatggtgtcggtcgcgaccgccatgatcccgttcctc
gagcacgacgacgccaaccgcgcgctcatgggctcgaacatgatgcgccaggcggtgccg
ctgctgaagagcgaggccccgctggtcggcaccggcatggagtaccgctgcgccgtcgac
gccgccgacgtcatcaccgccgagaaggccggtgtggtgcaggaggtctcggccgactac
gtcaccgtggccaacgacgacggcacgtacaccacgtaccgcgccgccaagttcacccgc
tccaaccagggcaccgccttcaaccagaaggtgctcgtggacgagggcgcccgggtcgag
gtcaaccaggtgctggccgacggtccgtgcaccgacgagggcgagatggccctcggcaag
aacctgctcgtggcgttcatgtcgtgggagggtcacaactacgaggacgcgatcatcctg
tcgcagcgcctcgtgcaggacgacgtcctctcctcgatccacatcgaggagcacgaggtc
gacgcccgtgacaccaagctcggccccgaggagatcacccgggacatcccgaacgtctcc
gaggaggtcctcgccgacctcgacgagcgcggcatcatccggatcggcgccgacgtcgtc
accggtgacatcctcgtcggcaaggtcaccccgaagggcgagaccgagctgacccccgag
gagcgcctgctccgcgcgatcttcggtgagaaggcccgtgaggtccgtgacacctcgctg
aaggtcccgcacggtgagtccggcaaggtcatcggcgtccgcgtgttcgaccgcgaggag
ggcgacgagcttcccccgggtgtgaaccagctggtccgcgtctacgtggcccagaagcgc
aagatcaccaacggtgacaagctcgccggccgccacggcaacaagggtgtcatctccaag
atcctcccggtcgaggacatgcccttcctcgaggacggcaccccggtcgacatcatcctc
aacccgctgggtgtcccgtcccgaatgaacccgggacaggtcctggagatccacctcggg
tggctcgccaagcagggctgggacgtctccggtctcgccgacgagtgggcccagcgcctg
caggcgatcggcgccgaccaggtcgccggtggcaccaacctcgccaccccggtcttcgac
ggcgcccgcgaggacgagatcaccggcctgctggacaacaccaccctcacccgtgacggt
gagcgcctggtgaactccaccggcaaggcccgcctgttcgacggccgctccggcgagccg
ttcccgatgccggtctcggtcggctacatgtacatcctcaagctgcaccacctggtcgac
gacaagctgcacgcccgttcgaccggtccgtactcgatgatcacccagcagccgctcggt
ggtaaggcgcagttcggtggtcagcgcttcggtgagatggaggtgtgggccctcgaggcg
tacggcgccgcgtacgccctgcaggagctgctcaccatcaagtccgacgacgtgctcggc
cgcgtgaaggtctacgaggccatcgtcaagggcgagaacatccccgagcccggcattccc
gagtccttcaaggttctcatcaaggaaatgcagtcgctctgcctcaacgtggaggtgctg
tcctcggacggccagtccatcgagatgcgggactccgacgaggacgtcttccgcgccgcc
gaggagctcggcatcgacctgtcccggcgcgagccgagcagcgtcgaagaggtctga
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