Kwoniella dejecticola: 28966750
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Entry
28966750 CDS
T10965
Symbol
I303_103031
Name
(RefSeq) uncharacterized protein
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
kdj Kwoniella dejecticola
Pathway
kdj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kdj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
28966750 (I303_103031)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kdj03019
]
28966750 (I303_103031)
Messenger RNA biogenesis [BR:
kdj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
28966750 (I303_103031)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
28966750 (I303_103031)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
DUF3819
CNOT1_TTP_bind
ARM_Cnot1
CNOT1_HEAT
NOT1_connector
WBP-1
AbiEi_2
Exo_endo_phos
Acetyltransf_11
Motif
Other DBs
NCBI-GeneID:
28966750
NCBI-ProteinID:
XP_065824752
UniProt:
A0AAJ8KL37
LinkDB
All DBs
Position
3:join(1780547..1780825,1780880..1781860,1781910..1782698,1782755..1785697,1785783..1787349,1787415..1787758)
Genome browser
AA seq
2300 aa
AA seq
DB search
MSIPPPGLGGGVNRTGPPPGFGGGNVGVTHSPASDASGTLSNPGVSGGNVGGSQGGRRDG
QGGPAVIIRAQIVFLLTTFTEDNFDKMSNEIRTLASSNGPEMYHHFLRRAIAVANPVLQI
LIQHSQQYKDDPAAPPPQLPTTGQAALVWRLLVTEAVRAARDVQLAPHFSFIMLSPAQST
PLPLPSLRLFNLPPTLMFSLSAYTLASPHVFPPSHASFAVFHAILAQTFQPTMELLRSPN
VPFWNMNTIPGREPYTDDLTLQEARTLILALFPRSQSSPGGNPTSRPATPTNPTSPHASP
LNSMQRQNLLGSLTVKFSSPAIILQTLSALSPGGPPRSPGTVPLEDVLFELGDNLTQDEG
TVEAVVGRWWGPYLLEGVSDEEQRKQVTEEACHVVHGLCEGLSLGRSVDLHGVIKGMSGV
PSISWPDVVRSFDSPHTIAAYQTSIPLLICLIYVPPQAPIPPLAGLLPASLDAPTWDNIS
SLLSVLSLLTNLPPDAMPIFTMPTAPSPQSYARIVDPPTSDTQWSKAARQQANDLQGAGI
WNTLGLIQVLVNACGLAETDHPSEREREERAEIGRRATEMLEAAAKLAPELVLLALEKLP
VSQEIVDRAYEKQKPLPPSVANMHTRLLAVYLSTAANAMTSSALVFHQMWQASPEGLLSV
LLEFYGEDENNLGRIVEIAMELKVLDKLLASENLHLTLDVAALASNKDLLNLEEWLADGI
EVKGEEFLEAIFDFVEHKIRLEIDHQHAPESAPPLLYTLGTNVYSIFIRVVRNASNLSRG
DVARFKHLRTDILILNPRLLNLRPGSKAEQGFSEAKFPKEIVEKVDEMYQQMYSGQLKLD
DVIEELKRCQKSDDPLDQDAFAHALHSLFDEYRFVKAYPPKELTMTGLLFGAIIDYRLVK
DTSAFVATRYVLDACKTPPHEALYQFGINALSILRNSLVDFPGLCRSLLEIPALHESHPV
LINDIHQALQEREELDMQGGVKLAFPALKLPILIEEGDDEFREPEPKKKDAFMFIINQIA
PSNYEQKAQDLTALFENQYSRWFAHYFIDVRVSLEMNRHDIYMQILEALHSPVFEKHVLW
ETYRKARDLLNSEATMNSASERTTLKTVASWLGKITLARNKPIKLRELSVKDILIQGYDT
KRLIVAIPFVCNLITSCKDSVVFHTPNPWLTAILRLLAEFYHFAELRLNLKFEIEVLFSK
LGVELESIDPSDQLRLHVPPPPPQEEMPNRLDLELQRATSEIMNGGQRFSELPGNEAYAR
MQQLQTEAAAQAAQDAMTRRVDELIAQLPQYLVFNQDYPIFTAPTLKRIVHHSIDRAIRE
IIGPVIERSVTIAGISSRDLIQKDFGMEGDAVKMRSAAHMMVQNLAGSLALVTCKEPLRT
SMIGNIKQMLEQNGYTDDSMPDAMIAGVVNQNLDVACSVLKKAAMEKAAKDIDVNLAPQY
AARKAHQNLRSQAPFWDGASFGFALSHNALPDPLKLRPGGLTAQQFRVYEDFGEPSRMIS
QPTPPTNGDYLVPQYRDLNLNDGLVPSDIKRGPSPRVFNQNIIEGPESVASPQAIPPQTS
VDRFHEIASEIEKLLSQTPITNISALPAEHEIRALIRNIVIIANQSVHRDSTTLTIAQKV
VQLLYRSTVQLAREVYVYLLQQLCDLSPKVSREVKQWLVYAEDPRKFNVPVTVTLIRAQS
ISVHELDAALAQLVVRSYAPKVIDFIAQLIRECSISENAFIPRNGFANSLAALLKAQEIG
RVTPLADGLFEELRGGTLKSPAIPTPDAKPGIDGKLQERLSHYFLEWVRVFSTSKNAEVA
FVPYITYLQKEGILNGEDVSSAFYRTAINTAVDLDTAKLQQGLFYGTDALAKLIVLIVKN
YGDKSGTSSVSRTVYYYNKIITIMSYSLVQKQLEMGDAFNQRPWARFFTSMLSELQSIEY
NLPETYLGCLKHFANNLGITQPTYAPRFAFGWISIVSHRLFMPKLLATARDDGWPEYHRC
VMWLLRFLSPFLSAGDQMSPSSRSIFKATIKLLVILMHDFPEFLVEFYHTLSTAIPPHCV
QMRNIILAAFPSSEAPLPDPYKRLELLVADMQRFPVVRSDYIGALTDGNLKSGIDQFVRN
GVPALPSIVNELKNRIAVKALINGTSSVEGAASNITWNHTLLHAAVFYLGTTAVARRAQQ
TGHVDFDSKAPEVAVLNGLVHALDAEGQYYMLSVVADQLRYPSAHTSFFIHFILFLFGTS
SRPVEGQPPSAVPERIARILLERTLVQRPHPWGLLVAFIELLDNEAYGFWKQPFVRAEEE
VYRLFGQVRGSVVARRELQA
NT seq
6903 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatccctcctcccgggctgggaggcggggtcaatagaaccggtccacccccggga
ttcggcggtggaaatgtcggagtaacgcattcaccggccagcgatgcaagcggtaccttg
tcaaatccaggtgtgtctggcggcaatgtcggaggctcccaaggaggaaggagagatggc
caaggtggtccagcggtaatcatcagagcacaaatcgtatttctcttgactactttcact
gaggacaacttcgataaaatgtccaacgagatccgaacactcgcttcgtccaatggaccg
gagatgtatcatcactttcttcgaagggcaatagcggttgccaacccggttctccagatt
ctcattcaacattctcaacaatacaaggatgaccccgctgcccctcccccacaattgcct
acaacaggtcaagcagctctcgtttggcgactgttggtgacggaagcagtaagagcagca
cgagatgtgcagttggcgccccatttctcgttcatcatgttatctcccgcacaatcgaca
cctttacctttgccatctctgcgattattcaacttgcccccaactttgatgttctcactc
tcagcatacacgcttgcatcgcctcatgtattcccaccatcgcacgcatcgttcgcagtc
ttccacgccatacttgcgcaaacctttcagccgacgatggaactgttacgatctcccaat
gttccattctggaatatgaacacaatcccggggagggaaccctacacagatgatttgact
ctacaagaagctagaacattgatactagccttgtttcccagatcacagtcgtcacctgga
gggaatcctacgtcaagaccagcaacgcctacaaatcctacctcaccgcacgcatcccct
ctcaattccatgcaacggcaaaaccttcttggatcgctcactgtcaaattctcttctcct
gccatcatacttcaaacactatcagcattatcacctggtggtccaccgcgatcgcccggt
accgtgcccctagaggatgtattattcgaattaggtgacaatctcacacaagatgagggt
actgtggaggcggttgttgggagatggtggggaccatatctgcttgaaggtgtgtcagat
gaggaacaacgcaagcaggtcacggaagaggcatgtcatgttgttcatgggctgtgtgag
gggttaagtttaggtcgctcggtcgatttacacggtgttataaagggaatgtctggagtc
ccatccatttcatggcctgacgtcgtgcgatcattcgactcgccgcacacgatagctgcc
tatcaaacatccattcccctgttaatctgcttgatatacgtaccacctcaagctccaatt
cctcctcttgctggcttactgcctgcttcattagatgccccaacctgggacaacatctca
tcactcctttcagtcctctcccttttgaccaatttacctcccgacgcgatgccaatattc
accatgcctactgctccctcaccccaatcttacgcacgcatagtcgatcccccaacatcg
gatactcaatggagcaaagcagcccgacaacaggctaacgatcttcaaggtgcgggaatt
tggaatacattaggcttaattcaagtgctagtcaatgcatgtggtttggcagagaccgat
cacccttcagaacgagaaagagaggaaagggctgagattggcagaagagccaccgagatg
ctggaggctgctgccaagttagcaccagaattagtactgctcgctttggagaagctacct
gtaagtcaagagatcgttgatcgagcttacgagaaacagaaaccgcttccgccgtctgtg
gccaacatgcataccagactcttagccgtatatctctctacggccgcaaatgcaatgaca
tcctcggcgctggttttccatcagatgtggcaagctagccccgaaggcttgctatctgtc
ttactagagttctacggcgaggacgagaacaatcttgggcgaatcgtggaaatcgctatg
gagcttaaggtccttgacaaattgctggcctctgaaaacctgcatctcaccttggacgta
gctgctctcgcctcgaacaaggatctgctgaacctcgaggaatggctcgcggacggcatt
gaggtcaaaggagaagagttcttagaagcgatctttgacttcgtggaacacaaaatacgt
ctggaaatcgaccatcagcatgctcctgagtcagctccccctcttctttacaccctcggt
accaacgtgtattctatcttcatccgggtcgttcgaaacgcttccaacctctcacgaggg
gatgttgcacgatttaagcatttgcggaccgatatcctcatcctgaaccctcgtcttctc
aacctgagacccggtagcaaagctgaacaagggttttccgaagccaaattccccaaggag
atagtcgagaaggtcgacgaaatgtatcagcaaatgtacagtggacagctcaagttagat
gatgtaatcgaggagctcaaacgatgtcagaagtcggacgatccattggatcaagatgcc
ttcgcccacgctcttcactcgctcttcgacgagtacaggttcgtcaaagcctacccaccg
aaggagcttaccatgacgggccttttgttcggtgcaatcatcgactatcggctggtcaaa
gatacatcagcattcgtcgcgacaagatatgttcttgacgcctgcaagacaccgcctcat
gaagccctttaccaattcggtatcaatgccttgagcatattgcgaaactctttggtcgac
ttccctggtttatgtcgatccctgttggagatccccgcacttcacgaatctcatccagtc
ttgatcaacgatatccaccaagctttgcaagaaagagaagagctagatatgcagggcggt
gtcaaactggctttcccagcgctcaagctgccaatcttgatcgaggaaggtgacgacgag
ttcagagaaccagaacccaagaagaaggatgccttcatgttcatcatcaatcaaatcgca
ccaagcaactacgaacagaaggcccaagatctcactgcgctgttcgagaatcagtattcc
agatggttcgctcactactttattgacgttcgagtcagtctcgagatgaatcgacacgac
atctacatgcagatactcgaagcactccattcgcctgtattcgagaaacacgtgctttgg
gaaacctatcgaaaagccagagatctgcttaattcggaagctaccatgaattccgcgtct
gagaggaccacactcaagacagtcgctagctggctaggaaagatcaccttggctcgaaac
aagcccatcaagctgagggaattatcggtcaaggacatattgatccaaggatatgacacc
aagcgactcatcgtcgcaatccctttcgtgtgcaaccttatcacatcctgcaaagactct
gtagttttccacacgcctaatccctggctcacggctatacttcgacttctcgccgaattc
taccatttcgcagaacttcgtttgaacctcaaattcgaaattgaagtcttgttcagtaaa
ctcggggtcgaattggagtccatcgacccctccgaccagcttcgattgcatgtacctcct
ccaccaccacaggaggaaatgcccaaccgacttgatctggagttgcaacgagccactagc
gagatcatgaatggcggtcaacggttctctgagctgccaggcaacgaagcttatgcaagg
atgcaacagctccaaaccgaagctgccgcacaagccgctcaggatgccatgacaagacga
gtagacgagcttatcgctcaattgcctcaatatctcgttttcaaccaagattacccaatc
ttcacggctcccaccctcaagcgaatcgtccaccactctatcgatcgggctatcagggag
atcatcggtccagtcatcgagagatcagtcaccatcgctggtatctcgtctcgagatctt
atacaaaaggacttcggtatggaaggtgatgcggtcaagatgcgatcggctgctcatatg
atggtgcagaatcttgctggaagtttggccttggtcacctgcaaggagccccttaggacc
agtatgatcggcaacattaagcagatgttagaacaaaatggatacaccgacgactctatg
cccgatgcgatgattgccggagtcgtcaaccagaacttggacgttgcctgttcggtgctc
aaaaaagcggcaatggagaaagctgctaaggatatcgatgtcaatctggcgcctcaatat
gccgctagaaaggctcaccagaatctacgatctcaagctccgttctgggacggggcttcc
tttggcttcgctctttcgcacaacgctcttcccgatccactcaaattgcgacccggtggt
ctgaccgctcaacaattcagggtatacgaagactttggcgaaccaagccgaatgatctct
cagcctaccccacctaccaatggagattaccttgtacctcagtacagagatctcaacctg
aacgatggtctcgtaccttccgatatcaagcgtggaccatctccgagagtgttcaaccaa
aacatcatcgagggtccagaatccgtcgcttcgccacaagctatcccaccgcaaaccagc
gtcgacagattccatgaaatcgcttctgagattgagaaacttttgtctcagactcctatc
actaacatatctgctctcccagccgaacacgagatcagagctctgatcaggaacattgtc
atcatcgccaaccaatcggtacatagagactccaccaccctcactattgctcaaaaggtc
gttcaactcctgtacagatccactgtgcagcttgctcgagaagtctatgtatacctactt
caacagctttgtgatttgtcgcccaaggttagcagagaggtcaagcaatggttggtgtac
gctgaagatccgcgaaagttcaacgttcccgtgaccgtcacgctcatccgagcccaatca
atcagcgtccacgagttggatgctgctttggcgcaacttgtcgtccgatcatacgcacca
aaggtcatcgactttatcgctcaactcatcagggaatgctcgatctctgaaaacgccttc
atcccacgaaatggcttcgccaacagtttggctgctcttctcaaagctcaagaaattggt
cgagttactcctcttgcggacggccttttcgaagaactccgaggtggcactctcaagtct
cctgccatccccactccggacgcgaaacctgggattgacggaaagctacaggaaaggttg
tctcactacttcctggagtgggttcgagtattcagcacaagcaagaacgccgaagtcgcc
tttgtgccctacatcacgtatctccaaaaggaaggtatcctcaatggagaagacgtctct
tcagcattctacagaacggctatcaacacggccgtcgacctcgacactgccaagctccaa
caaggccttttctacggtactgatgctttagccaaattgatcgtcctcatcgtcaagaac
tacggagataagagcggaacaagcagtgtgtctaggacggtatactattacaacaagatc
atcaccatcatgtcgtactcacttgttcagaagcagcttgaaatgggagacgcgttcaac
caaagaccatgggcaagattctttactagcatgctgagtgagctgcaatcgatcgagtat
aacctaccggaaacatatctcggatgtctgaagcacttcgcgaacaatctcggcatcact
cagccaacatacgcacctagattcgcttttggttggatatccatcgtctctcaccgattg
ttcatgcccaagttgctcgctaccgccagggatgacggatggcctgagtatcacagatgc
gtcatgtggttgttacgattcctttcgccattcctgtcagccggtgatcagatgtcgcca
tcatcaagatcaattttcaaggctaccatcaagctgctcgtgatcttgatgcacgacttc
cctgaattcttggtcgaattctaccatacactctcgacggcaatcccaccccattgtgtc
caaatgcgaaacataatcttggccgctttcccctcgtccgaagctccgcttccggaccca
tacaagagattggaactccttgtggctgacatgcaaagattcccggtcgtccgatccgat
tacattggcgctctcacagatgggaacctcaaatccggtatagatcaattcgtcagaaac
ggtgtgccagctttaccttctatcgtcaacgagttgaagaatagaatcgccgtgaaagca
ctcatcaacggaacttcttcggtagagggtgccgcttcaaacatcacttggaaccatacc
ctcctgcacgccgcagtattctacctgggcactaccgctgtggcgagacgagcacaacag
actggacatgtagatttcgattcgaaagctcccgaagttgcagtcttgaatggcctcgta
cacgccttagacgctgagggccaatactacatgctcagcgtcgttgctgatcaactacga
tacccctcggcccatacatccttcttcattcacttcatcttgttcctctttggtacttcc
tcaagacccgtcgaaggtcaaccaccttcagctgtacctgaacgaatcgcgaggattctc
cttgaacgaacgctcgtacaaagacctcacccttggggattgctggttgcgttcatcgag
ttgctcgacaatgaagcctatggtttctggaagcagcccttcgtacgagctgaagaggag
gtatacaggttgttcggccaggtcagaggtagtgttgtcgccagaagagagttgcaagcg
tag
DBGET
integrated database retrieval system
