Kwoniella dejecticola: 28969220
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Entry
28969220 CDS
T10965
Symbol
I303_105033
Name
(RefSeq) uncharacterized protein
KO
K12600
superkiller protein 3
Organism
kdj Kwoniella dejecticola
Pathway
kdj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kdj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
28969220 (I303_105033)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kdj03019
]
28969220 (I303_105033)
Messenger RNA biogenesis [BR:
kdj03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
28969220 (I303_105033)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_16
TPR_8
TPR_2
TPR_19
TPR_17
TPR_CcmH_CycH
TPR_1
TPR_14
TPR_12
TPR_11
TPR_9
ANAPC3
TPR_6
TPR_7
Alkyl_sulf_dimr
ChAPs
TPR_20
HrpB1_HrpK
ARM_TT21_C
Sel1
Cohesin_load
Tic110
Clathrin
Motif
Other DBs
NCBI-GeneID:
28969220
NCBI-ProteinID:
XP_018262504
UniProt:
A0A1A6A3M8
LinkDB
All DBs
Position
6:complement(join(401931..402459,402522..403141,403202..403411,403474..404394,404452..404819,404873..405288,405341..405498,405551..405864,405914..406173,406230..406684,406747..406822,406880..407016,407076..407133,407186..407316))
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AA seq
1550 aa
AA seq
DB search
MSSTKKALKSMKSHLEDRDSESALYEANTWLKSIGEDAPEAAQVLIFRGLALTQLQRNEE
AEKSYIHAYKLDSSNPLASLGLKKLYEKNEDWEKLGRLLELFVQTAYDDGDGEKCAAALQ
DLLELRVKRGPSEKLYRALEQLLPSSPLVPLIRDVTPPSESYVPFPAPIYPPASAAIAPS
LPSPLPHALHLVASLPLLTNLLVRAESLVHTTVEKEVKIGRQRLGAGPEKEVRRKVEAEV
LGGELGMRMVELLKEVGSHPKVAEDVRREVEIREFNFWRKLGASLPSQLAEKPASNKPKG
KSDKPAQPPKTGATDLPAASLFAPHTYSTPNKEEALKRTNDLANGFVLLGITGKGAEEGW
SWVLEGKDEPTLFYDIELLHKYAKSFPETKMTDFIDDYCRWFKLPLPEPEEEEEVSPSVN
GEETAAQKASKKPRNRKGRSGMNARERRKARRAAGKEGLLAEDLDQEEREELVSAMTKLV
DQLPKSIFAYRVMARISLQEEDWANAIAFGDKGKALVKELENERGITLPSVRASLDTVIG
MACVPHFAPKHHPRAVRLLDGVLKLQPDNKEARFARAQIHQASGKWAQARKEFQVLIDAG
GDERDVVAAKEESAWCLVNQGNVEEGRTILEEVVEIRDARWEKDGKDDEAFPRARAWWRL
GRAEWLIGDEESRQHAEEWFMASIRALPTFPSAYTSLGICYESANPPDEERALKCFQKAF
ELDATETEAAHKLAVGYANDDEWSLVRTIAMRVMEGEGGLDGVAGGEVMNAKGRFAPQNG
WAWKALGSTEVHYKNYAKAAQAYQIALRGDPNDVSMWVMLGESYVKCGRHIAGLKTLNHA
LELQSDNWRALFNIGETQAQLGVFDKAIEAYERVLDTAGRGQIGIIAALADAHLALGRQT
AAGGFRQRSRNALHSAIKLATDVLKDGRSHRAWAWKTVGDATFELSNQESSAEEASASAE
VLQPVLQHLMDDDTDRRSQVEGIGHAANLLQTSPDLEYTLKSSIFAFAYRAYLLKNEPRI
ADPALYDLASSLHSLALRLPEGEKRTSCLKAAIGSIRLALERDPGDERLWNALGVISETA
GPQVAQHAFVVSLELYSKDPIVWANLGYLYLRLDDRELANPCFLKAQITDPDYAPAWFGQ
GMLAERNGDKHNAKALYSHAVTLSAGSLLEADLALAIATFERFLVPGAQIDVNLLHQPAF
ALRHYCHQRPNDFAAAHLYGLICERLGLADEAATSLERAAAVLEEEFERTESADIESRYA
VALVNLGRVQLAAKKYQRSLDILNNCWELISGSTDGPDGQIALLKPQCRLLQGLVQYWLG
QIDESLDAFQNALDEATSSQDWRTKEEVAVLLSRTLWGLGGEDARETAKSNLMECLSQER
PSLKVISTLAAIAVVSSDVDLVEAAMSELQSRPLETRIKEDPTGQSDLVLYLHALSEGRP
DEAHAILEKAVQAKPADVSARNRLAEAFIQAGKAKEAVEVLESMDKVEDVEDKAASQRLR
GTAEILDGREEGLSRLQKSVMVAPWEEEEWNVLSWGRKMVVGAEVGAKAE
NT seq
4653 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcaactaagaaagcattgaaatccatgaaatcgcatttggaagaccgagactcg
gaatctgcgctgtatgaggcgaatacttggctgaaatcgatcggagaggatgcaccagaa
gccgctcaagtattgatatttcgaggcctggcgttgactcagctgcaacggaacgaagaa
gcagaaaagtcgtatattcacgcttacaagctagattcttcgaatccgctggcctcgttg
ggcttgaagaagctatacgagaagaacgaagactgggagaagctcggtcgtctgctcgaa
ctgttcgtgcagactgcatatgacgacggcgatggcgagaaatgtgccgctgctttacaa
gatctattagagcttcgagtaaaacgtggtccgtcagagaagctatatcgagcattagaa
caactccttccctcttcacccctcgtaccgctcatacgtgatgtcacaccgccaagcgaa
tcatatgttccatttccagcaccgatataccctcccgcttccgcagctatagctccttct
ctgcccagtccattacctcacgcactacatctcgttgcttcattaccgctattgacgaat
ctgttggttcgagccgagtcgctggtccatacgactgtggaaaaggaggtcaaaattggc
cggcaacgactgggcgctggaccagagaaagaagtcaggcggaaagtggaagcggaagtg
ctaggaggtgaattgggtatgaggatggtcgaattgctgaaggaggtgggatcccatccc
aaggtagcggaagacgtcagaagggaagtggaaatcagggagttcaacttttggagaaag
ctgggagcatcgttgccttctcaattagctgagaagcctgcatcaaacaagcctaaaggc
aaaagcgataaacccgcccaaccgcccaagacgggagctacagatctgcctgcagcttcg
cttttcgcaccgcatacctattcgacgccgaacaaggaagaagcgttaaagaggacaaat
gacctagccaatggtttcgttcttctaggtatcacagggaaaggcgctgaagaaggatgg
tcttgggttctggaaggcaaggacgagccgaccttgttctacgatattgagcttctgcac
aaatatgccaaatcattccccgaaacgaagatgaccgacttcatcgatgattattgtaga
tggttcaaactccccctaccggaacccgaagaagaggaagaggtgtccccatcagtcaac
ggagaggagacagcagcgcagaaggctagtaagaaaccaagaaacagaaaaggtcgaagt
ggaatgaatgctcgagaacggagaaaagctcgtcgagccgccggtaaggaaggtttattg
gctgaggacttggatcaggaggagagggaagaactggtctcggcaatgacaaaattggtt
gaccaattgccgaaatcaatattcgcgtatcgagtcatggctagaatatctctacaagag
gaagattgggcgaatgctatcgctttcggggataagggcaaggccttggtcaaagagctt
gagaacgaacgaggaatcacgctacctagtgtccgagcgtccctcgatacagttataggt
atggcttgcgttcctcactttgcccccaagcatcatccccgagccgtccgactgctcgac
ggcgtcctcaagctgcagccggacaacaaggaggctcgattcgctagagcgcagatacac
caagcttctggtaaatgggcacaggctagaaaggagttccaagtcctcatagacgctggc
ggagatgagagggacgtggtggccgccaaagaggagtccgcttggtgtctggtcaaccaa
gggaacgtcgaggagggtcggacaattcttgaagaggtggtggagatcagggatgcccga
tgggagaaagacgggaaggatgacgaagcattcccaagagctagagcttggtggagattg
gggagagcggaatggctcataggagatgaagagagtcggcaacatgctgaagaatggttc
atggcatcgatccgagctttacccactttcccctccgcctacacctcgcttggtatctgc
tacgagtctgctaatcctccggacgaagagcgggcgctcaagtgctttcaaaaggctttc
gagctcgacgcaaccgagactgaagctgctcataagctcgccgttggttatgcaaatgac
gatgagtggtctttagtgagaacaattgcaatgagagtaatggaaggtgaaggcggttta
gacggagtggccggtggagaggtcatgaatgccaagggaagattcgctccccaaaatggc
tgggcctggaaagcgcttggatcgacagaagttcactacaaaaattacgccaaagctgcg
caggcttaccaaatcgctcttcgaggcgaccccaacgacgtctccatgtgggtcatgcta
ggcgaatcatacgtcaagtgcggtcgacacatcgcaggtctcaaaactctcaaccatgct
ctcgaattgcaatccgacaactggcgagctcttttcaatataggggaaacccaagcgcag
ctaggtgtcttcgataaagccatagaggcgtatgaacgagtgcttgataccgctggcagg
ggacaaatcggtatcatcgctgctcttgccgatgcacatctcgcactaggtcgacagacg
gctgccggcggtttcaggcaaaggtcgaggaatgccttacattccgccatcaagctagca
acagatgttctgaaagatggcagaagtcaccgagcctgggcgtggaagaccgttggcgac
gctacgttcgaattgagcaaccaagaatcgagtgctgaggaggcgtccgcatcagccgaa
gtcttacagcccgttcttcagcacttaatggatgatgacacggatcgaagatcgcaggta
gaaggaattgggcatgccgcaaacctgttgcaaacttcgccagatctggaatataccctc
aaatcatcaatatttgccttcgcctaccgagcttatctgttgaagaacgagcccagaata
gcagacccggccttgtatgatctggctagctcgctgcattcccttgccctcagactaccg
gaaggcgagaagagaacctcatgcttgaaggctgcaattggtagcataagattggctttg
gagagggatccgggagatgagagactatggaatgctcttggtgtgatctcggagacggcg
ggaccgcaagtagcccagcatgctttcgtggtttccctcgagctttactccaaggatcca
atcgtatgggccaatctcggatatctttaccttcgattggacgacagagaactcgccaat
ccatgcttcctcaaagcccaaatcactgatcctgattatgcacccgcatggttcggccag
ggtatgttggcggagagaaatggagacaagcacaatgccaaagctctatactcccacgcg
gtcaccttatctgctggatcacttctcgaagcggatcttgctttggccatcgctaccttc
gaaagattccttgtgccgggtgcccagatcgatgtcaaccttcttcatcaacctgccttc
gctctgcgtcactactgccaccagagaccaaacgactttgccgcggctcatttgtatgga
ctgatctgcgaaaggcttggtctggccgacgaagctgctacatcgcttgaacgagcagct
gcagtactcgaggaggaattcgagaggacagagtcggcggatatcgaatctcgttacgct
gtggcgttagtcaatctaggaagagtgcaacttgctgcgaagaaataccagagatcgctt
gatattctcaacaactgttgggagttgatctccggatctacagacggaccagacggacaa
atcgcactgctcaaaccccaatgtaggctattacaggggctggttcaatattggctaggt
caaatcgacgaatccttggacgcgttccagaatgccttggacgaggctacttcttctcaa
gactggaggacaaaagaggaagtagcggtattattgagcaggacgctttggggactggga
ggtgaggatgcaagggagaccgctaagagcaatctgatggagtgtctctcgcaagagcgc
ccgtcactcaaggtgatttccactttagcagcgatagcagtggtgtcatcggatgtggat
ctggtggaagctgcaatgtccgaattgcaatcccgaccactcgaaacgcgaatcaaggaa
gatccaaccggtcaatcggacttggtcttatatttgcatgcgctttctgaaggtcggccg
gatgaagctcatgctatcctcgagaaagcggtacaggcgaaacctgcggatgtcagcgcg
agaaacaggttggctgaagctttcatccaagctggaaaagccaaagaagcggttgaggta
ttggaaagtatggacaaggtggaggacgttgaagataaggcggcatcacagagactgagg
ggtacagctgagattttggatggtcgcgaagagggcctaagtagattgcagaagagcgtc
atggtagcgccatgggaagaagaggaatggaatgtcctctcatggggaagaaaaatggtg
gttggagcagaggttggagccaaagcagagtga
DBGET
integrated database retrieval system
