Kwoniella dejecticola: 28971542
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Entry
28971542 CDS
T10965
Symbol
I303_107839
Name
(RefSeq) pre-mRNA-splicing factor CLF1
KO
K12869
crooked neck
Organism
kdj Kwoniella dejecticola
Pathway
kdj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
kdj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
28971542 (I303_107839)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
kdj03041
]
28971542 (I303_107839)
03036 Chromosome and associated proteins [BR:
kdj03036
]
28971542 (I303_107839)
Spliceosome [BR:
kdj03041
]
Complex B
Other components
Prp19-related factors
28971542 (I303_107839)
Complex C
28971542 (I303_107839)
Chromosome and associated proteins [BR:
kdj03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
28971542 (I303_107839)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_Syf1_CNRKL1_C
TPR_14
HAT
Suf
TPR_2
TPR_19
TPR_CcmH_CycH
TPR_8
HAT_Syf1_M
SNAP
Mad3_BUB1_I
ARM_TT21
TPR_16
U3_assoc_6
TPR_12
Motif
Other DBs
NCBI-GeneID:
28971542
NCBI-ProteinID:
XP_018259774
UniProt:
A0A1A5ZVV6
LinkDB
All DBs
Position
10:join(826192..826257,826320..826482,826536..827128,827180..827504,827553..827668,827719..827898,827947..828330,828387..828528,828591..828835)
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AA seq
737 aa
AA seq
DB search
MSGRDTRDRAPRVKNRAAAAVQITAEQLLREAQERQEPAIQAPKQRVQDLEELSEFQGRK
RTEFEGRIRYSRDNIRAWIKYAQWESSQNEFERARSVFERALDIDPRSNELWLRYTDMEL
KARNINHARNLYDRAVTLLPRVDALWYKYVYLEELLLNVPGARQIFERWMQWEPNDKAWQ
SYIKLEERYNELDRASAIYERWIGVRPIPKNWVIWAKFEEERNQPDKAREVFQTALEFFG
DEEEQVEKAQQVFAAFARMETRLKEYERARVIYKFALARLPRSKSASLYAAYTKFEKQHG
DRAGVELTVLGKRRIQYEEELAYDGTNYDAWFSLARLEEDAYRADKEDGEEVEPTRVREV
YERAVANVPPALEKRYWRRYIYLWLQYAAFEEIETKDFDRARDVYKAAIKLVPHKSFTFA
KLWLSYAYFEIRQLDVTAARKVLGAGIGMCPKPKLFSGYIELEMRLREFDRVRMLYEKFL
TYDSSLSAAWIQWTQVESAVEDFERVRAIFELAVQQSLDMPEIVWKAYIDFESGEGEREK
TRSLYERLLERTSHVKVYISYALMEISVLGGGEDEDGNEIEGEAGDAELARAVFARGYKD
LRTKAEKEDRALLLEAWKSFEQEHGTPENLAKVEEMMPTTRKRWRKAEDGSDMLVEYWDL
IFPDDERDANPTSFKFFQAAQQWAAQRGGDEGEGGLSYDLPSDSDEDDEEEAEEVEVADV
AEDGQAAGTAEPMDEDD
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgtccggtagagacactcgagatcgagctcctcgagtcaaaaatcgagccgcggcggct
gttcagattaccgctgaacaactgctacgagaggctcaagaaaggcaagagcctgctatc
caagcaccaaaacagcgagtccaggatttagaagagctctcagagttccaagggaggaag
agaaccgaattcgagggacggataagatattcgagggataacataagagcctggatcaaa
tacgctcagtgggagtctagtcaaaatgagttcgaaagagctagatcagtgttcgaacga
gctctggatatagaccctaggtcaaatgaattatggctcagatacaccgatatggaactc
aaggcacgtaacatcaatcacgctcgaaacttgtatgaccgtgccgtcacacttctaccg
cgggtcgatgccttatggtataaatacgtctacctagaagaattactgctcaacgtacct
ggagcaaggcagatcttcgagaggtggatgcagtgggaaccgaatgacaaggcatggcag
agttacatcaaattggaggagcggtataacgagcttgatagggcttcggcgatatacgag
aggtggataggagtacgacccataccgaagaactgggttatatgggccaaattcgaggaa
gaaaggaatcagcccgataaagcgagggaagtgttccagacggcgttggagtttttcggt
gatgaagaggaacaggtggaaaaggcccaacaggtgtttgcggcgtttgcaaggatggag
actaggttgaaggagtacgaaagagctagggtgatctacaagtttgctctcgctcgatta
ccgcgatcgaaatccgcaagtctgtacgcggcctacaccaaattcgaaaagcagcatggt
gatcgtgccggagtagagcttactgtacttggaaaacgacgtatacagtatgaggaggag
ttggcgtatgacgggacaaattacgatgcttggttctcgttagctagattagaagaagat
gcgtatcgagcagacaaggaagacggagaagaggtagagccaacaagggtgcgagaggtg
tatgagagagcagtagcgaacgtccctcctgcattagagaagcgatattggaggcggtat
atctacttatggttacaatacgctgcgtttgaggagatcgaaacgaaagatttcgataga
gctagagacgtgtacaaagcagccattaagcttgtgccccataaatccttcacttttgcc
aagttatggctttcatacgcgtacttcgagatccgacaattggacgtcactgccgccaga
aaggtgctgggtgctggtatagggatgtgcccgaaacccaagctcttctcaggctacatc
gaactggaaatgaggttgagagaattcgaccgtgtgcgaatgctatacgaaaagttcctc
acatacgactcctcactcagtgcggcatggatacaatggactcaagtggagtcagcggtg
gaagacttcgagcgagtccgagctattttcgaacttgcagtgcagcaatctttggatatg
ccagagatcgtctggaaggcatatatcgacttcgagtctggggaaggggaacgagagaag
actcgatcgttgtacgaaagactgctcgagcggacctcacacgtcaaggtgtacatctct
tacgctcttatggaaatctctgtgcttggcggtggggaggatgaggacggtaatgagatc
gaaggcgaggctggtgatgccgaattggcaagagccgtattcgccaggggatacaaagac
ctccggacgaaggcagagaaggaggaccgtgccctactactggaagcatggaagtcgttc
gagcaggagcacggcactccagaaaacttggccaaggtggaggagatgatgcctactacg
cgaaagagatggagaaaggcggaggacggaagcgacatgttggtggagtactgggatctc
atcttcccggacgacgaacgggatgccaacccgacatcgttcaaattcttccaagctgct
caacaatgggctgcgcaacgtggtggagacgaaggggagggtggattgtcttacgatttg
ccgtcggattccgatgaggatgacgaagaggaggcagaagaggtcgaagttgcggacgtt
gcggaggatgggcaagcagcaggaaccgcagaaccaatggatgaggacgattaa
DBGET
integrated database retrieval system
