Kocuria flava: AS188_14130
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Entry
AS188_14130 CDS
T04206
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
kfv
Kocuria flava
Pathway
kfv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
kfv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AS188_14130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kfv03021
]
AS188_14130
03400 DNA repair and recombination proteins [BR:
kfv03400
]
AS188_14130
Enzymes [BR:
kfv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AS188_14130
Transcription machinery [BR:
kfv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AS188_14130
DNA repair and recombination proteins [BR:
kfv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AS188_14130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
ALU40698
UniProt:
A0A0U3G7C0
LinkDB
All DBs
Position
complement(3157397..3160906)
Genome browser
AA seq
1169 aa
AA seq
DB search
MVASSTESNSTANRPADGNLPGRVSFAKIHEPLDVPNLLALQTDSFDRLVGNERWQARVQ
AALDAGEQGIATTSGLADIFEEISPIEDFQGTMSLSFSEPEFYEPKYTMDECKDRDATYS
APLYVKAEFMNNNTGEIKQQTVFMGDFPLMTEKGTFVINGTERVVVSQLVRSPGAYFERG
QDRTSDKDIYSAKIIPSRGAWFELEIDKRDQVGVRLDRKRKQSVTVLLKALGWTESRILE
EFGDFDSIRATLEKDTVDTREDALLDIYRKLRPGEPPTVEAAQSLLDNMYFNPKRYDLAK
VGRYKLNRKLGLDKSFGDDDASVLSVEDIVAMIRYLVTLHAGGTTVQGVRDGEAREIVVD
VDDIDHFGNRRIRAVGELIENQIRTGLSRMERVVRERMTTQDVEAITPQTLINIRPVVAA
IKEFFGTSQLSQFMDQNNPLAGLTHKRRLSALGPGGLSRDRAGMEVRDVHPSHYGRMCPI
ETPEGSNIGLIGSLATYGRINPFGFIETPYRKVVDGVVTDDVEYLTADDERGVTIAQANA
PLTDENRFAEDAVLARAADGSGEAVLVDPTAVQYMDVSPRQMVSVATALIPYLEHDDANR
ALMGANMQRQAVPLLESEAPLVGTGMERYAALDAGDSVLARKPGVVEEVSADLVRVLNDD
GTTTVYPINKFVRSNPGNTYNQRVIVSEGDRVEERSVIADGPSTDHGELALGKNLLVAYM
SWEGLNYEDAIILSQRMVSDDVLTSIHIEEHEIDARDTKLGAEEITRDIPNVSEEVLSAL
DERGIIHIGAEVQAGDILVGKVTPKGETELTPEERLLRAIFGEKSREVRDTSLKVPHGES
GTVIGVRVFDRDDEDDDLPAGVNQVVRVYVAQKRKITDGDKLAGRHGNKGVISKILPLED
MPFLADGTPVDIILNPLGVPGRMNLGQVLEVHTGWLAKQGWDLEGSPEWVERLPNFPAKS
GPTNVATPVFDGAREEEIFDLLDHTNPTRDGDRLIDRSGKARLFDGRSGEPFPEPISVGY
QYILKLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQE
LLTVKSDDVHGRVKVYEAIVKGENIPEPGVPESFKVLIKEMQSLCLNVEVLSADGNTIEM
RDSDDEVFRAAEELGIDLSRSEPSSVEEV
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
ttggtcgcctcgagcaccgaatcgaactcaaccgctaaccggccggccgacggcaatctc
ccgggccgcgtctccttcgccaagatccacgagccgctggacgtgcccaacctgctggcc
ctccagacggacagcttcgaccgcctcgtcggcaacgagcgctggcaggcgcgggtgcag
gccgccctcgacgccggcgagcagggcatcgccacgacctccggcctcgccgacatcttc
gaggagatctccccgatcgaggacttccagggcaccatgtccctgtccttctcggagccc
gagttctacgagcccaagtacacgatggacgagtgcaaggaccgcgacgccacctactcg
gcgccgctgtacgtcaaggccgagttcatgaacaacaacacgggcgagatcaagcagcag
accgtgttcatgggcgacttcccgctgatgaccgagaagggcaccttcgtcatcaacggc
accgagcgcgtggtcgtctcgcagctcgtgcgctccccgggcgcctacttcgagcgcggc
caggaccgcacctcggacaaggacatctactccgcgaagatcatcccctcccgcggggcg
tggttcgagctggagatcgacaagcgcgaccaggtcggggtgcgcctggaccgcaagcgc
aagcagtccgtgaccgtgctgctcaaggccctcggctggaccgagtcccgcatcctcgag
gagttcggcgacttcgactccatccgcgccacgctggagaaggacacggtcgacacccgc
gaggacgcgctgctggacatctaccgcaagctgcgcccgggggagccgcccacggtcgag
gcggcccagtcgctgctggacaacatgtacttcaacccgaagcgctacgacctcgccaag
gtgggccggtacaagctcaaccggaagctgggcctggacaagtccttcggcgacgacgac
gcctccgtgctctcggtcgaggacatcgtcgcgatgatccgctacctcgtgaccctgcac
gccggcggcaccaccgtccagggcgtgcgcgacggcgaggcccgcgagatcgtcgtggac
gtcgacgacatcgaccacttcggcaaccggcgcatccgcgcggtgggcgagctgatcgag
aaccagatccgcaccggcctctcccgcatggagcgcgtggtgcgcgagcgcatgaccacg
caggacgtcgaggcgatcaccccgcagaccctgatcaacatccgtcccgtcgtggcggcg
atcaaggagttcttcgggacctcgcagctgtcgcagttcatggaccagaacaacccgctc
gcgggcctgacccacaagcggcgcctgtccgcgctgggccccggcggcctctcccgcgac
cgcgcgggcatggaggtccgcgacgtccacccctcgcactacggccgcatgtgccccatc
gagacccccgagggctccaacatcggcctcatcggctcgctggcgacctacgggcggatc
aacccgttcggcttcatcgagaccccgtaccgcaaggtcgtggacggcgtggtgaccgac
gacgtcgagtacctcaccgccgacgacgagcgcggggtgaccatcgcgcaggccaacgcg
ccgctgaccgacgagaaccgcttcgccgaggacgccgtgctcgcccgtgccgccgacggc
tccggcgaggccgtgctggtcgacccgaccgccgtgcagtacatggacgtctccccgcgc
cagatggtctccgtggcgacggccctgatcccgtacctcgagcacgacgacgccaaccgc
gcgctcatgggcgccaacatgcagcgtcaggccgtgccgctgctcgagtccgaggccccg
ctcgtgggcaccggcatggagcgctacgccgccctggacgccggcgactccgtcctggcc
cgcaagccgggcgtggtcgaggaggtctccgcggacctcgtgcgcgtgctcaacgacgac
gggacgaccacggtctacccgatcaacaagttcgtccgctcgaacccgggcaacacctac
aaccagcgcgtcatcgtctccgagggcgaccgcgtcgaggagcgctcggtgatcgccgac
ggcccctcgaccgaccacggcgagctcgcgctgggcaagaacctgctcgtggcctacatg
tcctgggagggcctcaactacgaggacgccatcatcctgtcccagcgcatggtctccgac
gacgtgctgacctcgatccacatcgaggagcacgagatcgacgcccgcgacaccaagctg
ggcgccgaggagatcacccgcgacatccccaacgtctccgaggaggtgctctcggccctc
gacgagcgcggcatcatccacatcggcgcggaggtccaggccggcgacatcctggtcggc
aaggtcaccccgaagggcgagaccgagctgaccccggaggagcggctgctgcgggcgatc
ttcggcgagaagtcccgcgaggtgcgcgacacctccctgaaggtgccccacggcgagtcc
ggcaccgtcatcggggtgcgcgtgttcgaccgcgacgacgaggacgacgacctgcccgcg
ggcgtcaaccaggtcgtgcgggtctacgtggcccagaagcgcaagatcaccgacggcgac
aagctcgccggccgccacggcaacaagggcgtcatctcgaagatcctgccgctcgaggac
atgccgttcctggccgacggcaccccggtggacatcatcctcaacccgctgggcgtgccc
ggccgcatgaacctcgggcaggtcctcgaggtgcacaccggctggctggccaagcagggc
tgggacctcgagggcagccccgagtgggtcgagcgcctgccgaacttccccgcgaagtcc
gggccgaccaacgtcgccaccccggtgttcgacggcgcgcgcgaggaggagatcttcgac
ctgctcgaccacaccaacccgacccgcgacggcgaccgcctgatcgaccgcagcggcaag
gcgcggctgttcgacggccgctccggcgagccgttcccggagccgatctcggtgggctac
cagtacatcctgaagctgcaccacctcgtggacgacaagatccacgcgcgctccacgggc
ccgtactcgatgatcacccagcagccgctgggcggtaaggcccagttcggcggccagcgc
ttcggcgagatggaggtgtgggccctggaggcctacggcgccgcctacacgctgcaggag
ctgctgacggtcaagtcggacgacgtccacggccgcgtgaaggtctacgaggccatcgtc
aagggcgagaacatcccggagccgggggtccccgagtccttcaaggtgctcatcaaggag
atgcagtccctgtgcctgaacgtcgaggtcctctcggccgacggcaacacgatcgagatg
cgcgactcggacgacgaggtcttccgggcggccgaggagctcggcatcgacctctcccgc
tccgagcccagctcggtcgaagaggtctga
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