Klebsiella grimontii: JJJ10_02495
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Entry
JJJ10_02495 CDS
T07992
Symbol
csrD
Name
(GenBank) RNase E specificity factor CsrD
KO
K18765
RNase E specificity factor CsrD
Organism
kgr
Klebsiella grimontii
Brite
KEGG Orthology (KO) [BR:
kgr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kgr03019
]
JJJ10_02495 (csrD)
Messenger RNA biogenesis [BR:
kgr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
JJJ10_02495 (csrD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
GAPES4
Motif
Other DBs
NCBI-ProteinID:
QTP40616
LinkDB
All DBs
Position
522390..524330
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AA seq
646 aa
AA seq
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MRLTTKFSAFVTLLTGLTIFVTLIGASLSFYNGIQLKMTNRVQAVATMLDNRLVSMSFDQ
IEPQMDELMTPVEAVRVDFQLNGKSVYSHSRTDNYRPLGSSKQFRAITVPSLKHPGMAIH
LVYLDPMANYFRSLHVTAPLSIAIGFMVLIIFFSVRWIRRQLAGQELLELRTARILNGER
GPQVRGSVHEWPANTSSALDMLLSELQFASDQRSRMDTLIRSYVAQDSKTGLSNRLFFDN
QLSTLLEDQEKVGSYGIVMMIRLPDFDLLRDNWGRAATEEHYFTLINMLSTFIMRYPGAL
LARYHRSDFAVLLPHRTLKEADSIAGLLLKAMDALPPTRILDRDDMMHIGICAFRSGQTA
AQVMEHAEAATRNAVLQGSNSWAVYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAV
TRDGRVHHRELMCRLYDGKEEVIAAEYMPMVLQFGLAEEYDRLQITRLLPFLGFWPEENL
ALQVTVESLIRPRFQRWLRDTLMQCEKSHRRRIIFELAEADVCQYIGRLQPVMRLVNALG
IRIAVVQAGLTLVGTSWIKQLDVEVIKLHSGLSRNIEKRSENQLLVQSLVEACKGMPVQV
FATGVLSRSEWQVLSQCGVTGGQGEFFAASQPLDTNVKKYSQRYSV
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgcgattaacgacgaaattctcagcttttgtcacgttgctcaccggcctgacgatcttt
gtcacgctgattggcgcttcgctgagtttttataacggcattcagctaaaaatgactaac
cgcgttcaggcggtggcgacgatgctggataaccgtctggtctctatgtcctttgaccag
attgaaccgcagatggatgaactgatgacgccggtcgaagcggtgcgcgttgattttcag
ctcaatggcaagtcggtctatagccattctcgcaccgataactatcgccctttaggcagc
agcaagcagtttcgcgctatcacggtcccgtcgctcaaacacccaggtatggctatccat
ctggtatacctggatcccatggccaattacttccgttcactgcacgtcaccgcgccgctt
tccatcgccattggttttatggtgctgattatctttttctccgtgcgctggatccgtcgc
cagctggcgggccaggagctactggagcttcgcactgcgcgtattcttaatggcgaacgt
ggaccgcaggtgcgcggatcggtacacgagtggccagcgaacaccagtagcgcgctggat
atgctgctatccgaacttcagttcgccagcgatcagcgaagccgcatggataccctgatt
cgttcctatgtcgcgcaggattcaaaaaccgggctgagtaaccgattattttttgataac
cagctatcgacgctgcttgaagatcaggagaaggtggggtcatacggcatcgttatgatg
atccgcctgccggatttcgacctgcttcgcgataactgggggcgcgcggcgaccgaagag
cattactttacgctgatcaacatgctttccactttcatcatgcgttaccctggcgcgctg
ctggctcgctaccatcgcagcgattttgccgtcttgcttccgcatcgtacgttaaaagag
gcggacagcattgccgggttgctattgaaagccatggacgctctgccgccgacgcgcatt
ctcgatcgtgacgatatgatgcatatcgggatctgtgctttccgtagcgggcaaacggcg
gctcaggtgatggaacatgcggaagcggctacgcgcaatgcggtgctgcagggcagcaat
agctgggctgtctatgatgactctctgccggagaaagggcgtggcaacgtgcgctggcgt
acccttatcgagcagatgctcagccgaggcgggccgcgactttaccagaaaccggcggtg
actcgcgacggtcgcgtacatcatcgcgagctaatgtgccgtctgtatgatggcaaggaa
gaggtgattgcggcggaatatatgccgatggtgctgcagtttggcctggcggaagagtat
gaccgcctgcaaattacgcgactgctgccgtttttaggcttctggccggaagaaaacctc
gcgctgcaggtgacggttgagtctttaatccgcccccgattccagcgctggctgcgcgat
actttgatgcaatgcgaaaaatcgcaccgtcgacgtattatttttgaacttgcagaggcg
gatgtttgtcaatatatcggccgcctgcagccggttatgcggttggttaacgctttaggt
attcggatcgccgttgttcaggccggtctgacgctggttggaactagctggatcaagcag
ctcgacgttgaagtgattaagctgcattcggggttatcgcgcaatatagaaaaacgcagt
gaaaatcagctgctggtccagagcctggttgaggcctgtaaaggaatgccggttcaggtt
ttcgcaaccggcgtgctcagccgaagcgagtggcaggtgctgtctcaatgcggtgttacc
ggcggtcagggggaattttttgccgcctcacagccacttgacacaaatgtgaaaaaatat
tcgcaaagatactctgtttga
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