Phytobacter ursingii: AB182_25265
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Entry
AB182_25265 CDS
T03950
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
kin
Phytobacter ursingii
Brite
KEGG Orthology (KO) [BR:
kin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kin03016
]
AB182_25265 (trmE)
Transfer RNA biogenesis [BR:
kin03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
AB182_25265 (trmE)
Prokaryotic type
Methyltransferases
AB182_25265 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
Ras
RsgA_GTPase
AIG1
ABC_tran
Roc
GTP_EFTU
Arf
SRPRB
AAA_28
Gtr1_RagA
Motif
Other DBs
NCBI-ProteinID:
AKL14377
LinkDB
All DBs
Position
complement(4602812..4604176)
Genome browser
AA seq
454 aa
AA seq
DB search
MSHNDTIVAQATPPGRGGVGILRISGLNARDVAQAVLGKLPKPRYADYLPFKEADGTVLD
QGIALWFPGPNSFTGEDVLELQGHGGPVILDLLLKRILLLPGVRIAKPGEFSERAFLNDK
LDLAQAEAIADLIDASSEQAARSALNSLQGAFSVRINHLVEALTHLRIYVEAAIDFPDEE
IDFLSDGKIEAQLNSVMGDLDAVRAEARQGSLLREGMKVVIAGRPNAGKSSLLNALAGRE
AAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLRDASDEVERIGIERAWQEIEQADRVL
FMVDGTTTSAVDPAEIWPDFIARLPDKLPITVVRNKADVTGETLGISDVNGHSLIRLSAR
TGEGVDELRNHLKQSMGFDTRMEGGFLARRRHLQALSDAASHLEQGKAQLLGAWAGELLA
EELRLAQQALSEITGEFTSDDLLGRIFSSFCIGK
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgagccataacgacacgatcgtcgcccaggctaccccaccgggacgcggtggcgttggt
atcctgcgtatttccggtcttaacgcgcgcgatgtcgcgcaagccgtactgggcaagctg
ccaaaaccccgctacgccgactatctgccatttaaagaggcagacggcaccgtgttagat
cagggtattgcgttgtggtttccgggcccgaactccttcaccggcgaagatgtgctggaa
ctgcagggccacggcggcccggtgatcctcgatctgctgctcaaacgtattctgctgctc
ccgggcgtacgcattgcaaagccgggagagttctctgagcgggcgttcctcaatgacaag
cttgatttagcccaggcggaagccattgccgatctgattgacgccagttcagaacaggcg
gcacgctcggcgctgaactcactgcagggggctttttccgtacgcattaatcaccttgtg
gaagcacttactcacctgcgcatttacgtggaagcggcgattgatttcccggatgaggaa
atcgacttcctgtccgacggcaaaatagaagctcagctcaacagcgtgatgggcgattta
gatgccgtgcgtgccgaagctcgccagggtagcctgctacgcgaagggatgaaggtagtg
attgccgggcgtccaaacgccgggaaatcgagcctgctgaatgcgctggcgggccgtgag
gctgcgatcgtgacagatatcgctggcaccacgcgcgatgtattgcgcgagcatatccac
attgatggcatgccgttgcatattatcgacaccgccgggttgcgcgatgccagcgacgaa
gtcgagcgcatcggtattgagcgagcctggcaggagattgaacaggcagaccgcgtactg
tttatggtagatggtacgacgaccagcgccgttgacccggcagagatttggccggacttt
atcgcccgtctgcccgacaaactgcccattaccgtggtgcgtaacaaagcggatgtgacc
ggcgaaacgctgggtatcagcgatgtaaatggtcactcactgattcgtctgtcggcacgt
actggtgaaggcgtggatgagttgcgtaaccatctcaagcagagcatgggttttgatacc
cgtatggaaggcggctttctggcgcgtcgtcgccatctgcaggcactgtcagacgctgcc
agtcaccttgaacagggcaaagcgcagctactgggcgcctgggcaggggaactgctggca
gaagagctgagacttgcgcagcaggcgttaagtgagatcaccggagagtttacctccgac
gatctgctgggccgtattttctccagcttctgtatcggtaaatga
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