Klebsiella sp. PCX: GQR96_01075
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Entry
GQR96_01075 CDS
T11064
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
klx Klebsiella sp. PCX
Pathway
klx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
klx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GQR96_01075 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
klx03021
]
GQR96_01075 (rpoB)
03400 DNA repair and recombination proteins [BR:
klx03400
]
GQR96_01075 (rpoB)
Enzymes [BR:
klx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GQR96_01075 (rpoB)
Transcription machinery [BR:
klx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GQR96_01075 (rpoB)
DNA repair and recombination proteins [BR:
klx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GQR96_01075 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-ProteinID:
UKB67879
LinkDB
All DBs
Position
223834..227862
Genome browser
AA seq
1342 aa
AA seq
DB search
MVYSYTEKKRIRKDFGKRPQVLDVPYLLSIQLDSFQKFIEQDPEGQYGLEAAFRSVFPIQ
SYSGNSELQYVSYRLGEPVFDVKECQIRGVTYSAPLRVKLRLVIYEREAPEGTVKDIKEQ
EVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARIIPYR
GSWLDFEFDPKDNLFVRIDRRRKLPATIILRALNYTTEQILDLFFEKVVFEIRDNKLQME
LIPERLRGETASFDIEANGKVYVEKGRRITARHIRQLEKDDIKHIEVPVEYIAGKVAAKD
YIDEATGELICPANMELSLDLLAKLSQSGHKRIETLFTNDLDHGPYISETVRVDPTNDRL
SALVEIYRMMRPGEPPTREAAESLFENLFFSEDRYDLSAVGRMKFNRSLLRDEIEGSGIL
SKDDIIEVMKKLIDIRNGKGEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLS
LGDLDTLMPQDMINAKPISAAVKEFFGSSQLSQFMDQNNPLSEITHKRRISALGPGGLTR
ERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYAQTNEYGFLETPYRKVTDGVVT
DEIHYLSAIEEGNYVIAQANSNLDENGHFVEDLVTCRSKGESSLFSRDQVDYMDVSTQQV
VSVGASLIPFLEHDDANRALMGANMQRQAVPTLRADKPLVGTGMERAVAVDSGVTAVAKR
GGTVQYVDASRIVIKVNEDEMYPGEAGIDIYNLTKYTRSNQNTCINQMPCVSLGEPIERG
DVLADGPSTDLGELALGQNMRVAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELACVS
RDTKLGPEEITADIPNVGEAALSKLDESGIVYIGAEVTGGDILVGKVTPKGETQLTPEEK
LLRAIFGEKASDVKDSSLRVPNGVSGTVIDVQVFTRDGVEKDKRALEIEEMQLKQAKKDL
SEELQILEAGLFSRIYAVLVSGGVEAEKLDKLPRDRWLELGLTDEEKQNQLEQLAEQYDE
LKHEFEKKLEAKRRKITQGDDLAPGVLKIVKVYLAVKRRIQPGDKMAGRHGNKGVISKIN
PIEDMPHDANGTPVDIVLNPLGVPSRMNIGQILETHLGMAAKGIGDKINAMLKQQQEVAK
LREFIQRAYDLGADVRQKVDLNTFSDEEVLRLAENLRKGMPIATPVFDGAKEAEIKALLQ
LGDLPTSGQITLFDGRTGEQFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLG
GKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGNHQMEPGMP
ESFNVLLKEIRSLGINIELEDE
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atggtttactcctataccgagaaaaaacgtattcgtaaggattttggtaaacgtccacaa
gttctggatgtgccatatctcctttctatccagcttgactcgttccagaagtttatcgag
caagatcctgaagggcagtatggtctggaagctgctttccgttccgtattcccaattcag
agctacagcggtaattccgagctgcaatacgtcagctaccgtctgggcgaaccggttttt
gacgttaaagaatgtcagatccgtggcgtgacttactctgcaccgctgcgcgtaaaactg
cgtctggtgatctacgagcgcgaagcgccggaaggcaccgtcaaagacattaaagaacaa
gaagtctacatgggcgaaatcccgctcatgaccgacaacggtacctttgtcatcaacggt
accgagcgtgttatcgtttctcagctgcaccgtagcccgggcgtcttctttgacagtgac
aaaggtaagactcactcatccggtaaggttctgtataacgcacgcatcatcccttaccgt
ggttcctggctggacttcgaattcgacccgaaagacaacctgttcgttcgtatcgaccgt
cgtcgtaagctgccggctaccatcatcctgcgcgcgctgaattacaccactgagcagatc
cttgacctgttcttcgaaaaagtggtctttgaaattcgcgacaacaagctgcagatggag
ctgattccggagcgtctgcgcggcgaaaccgcctccttcgatatcgaagccaacggcaaa
gtgtacgttgagaaaggccgtcgcatcacggctcgtcatatccgtcagctggaaaaagac
gatatcaagcatatcgaagtgccggttgaatatatcgcgggcaaagtggcggctaaagac
tatatcgatgaagcgactggcgaactgatctgcccggcgaacatggagctgagcctggat
ctgctggctaagctgagccagtctggccacaagcgcatcgaaacgctgttcactaacgat
ctggaccacggtccatacatctctgaaacggtacgcgtcgacccgactaacgatcgtctg
agcgcgctggtagaaatctaccgcatgatgcgccctggcgagccgccgactcgtgaagcc
gctgaaagcctgtttgagaacctgttcttctccgaagaccgctacgatctgtccgcggtt
ggtcgtatgaagttcaaccgttctctgctgcgcgacgaaatcgaaggttccggtatcctg
agcaaagacgacatcattgaagtgatgaagaagctcatcgatatccgtaacggtaaaggc
gaagtggacgatatcgaccacctcggtaaccgtcgtatccgttccgttggcgaaatggcg
gagaaccagttccgcgttggcctggtacgtgtagagcgtgcggtgaaagagcgtctgtct
ctgggcgatctggataccctgatgcctcaggatatgatcaacgccaagccgatttccgca
gcagtgaaagagttctttggttccagccagctgtctcagtttatggaccagaacaacccg
ctgtctgagatcacgcacaaacgtcgtatctccgcactcggcccaggcggtctgacccgt
gagcgcgcaggcttcgaagttcgagacgtacacccgactcactatggtcgcgtatgtcca
atcgaaacgcctgaaggtccgaacatcggtctgatcaactccctgtccgtgtacgcgcag
accaacgaatatggcttccttgagacgccgtatcgtaaagtgaccgacggtgtggttact
gacgaaattcactacctgtctgctatcgaagaaggcaactacgttatcgctcaggcgaac
tccaacctggatgaaaacggccacttcgtagaagacctggtgacctgccgtagcaaaggc
gaatccagcttgttcagccgtgaccaggttgactacatggacgtatccacccagcaggtg
gtatccgtcggtgcgtccctgatcccgttcctggaacacgatgacgccaaccgtgcattg
atgggtgcaaacatgcaacgtcaggccgttccgactctgcgcgctgataagccgctggtt
ggtaccggtatggaacgtgctgtggccgtcgactccggtgttactgcggtggctaaacgt
ggcggtactgttcagtacgtggatgcctcccgtatcgttatcaaagttaacgaagacgag
atgtacccgggcgaagcaggtatcgacatctataacctgactaagtacacccgttctaac
cagaacacctgcatcaaccagatgccttgcgtgtccctgggcgaacctattgagcgcggc
gacgtgctggccgacggcccgtccaccgacctcggtgagctggcgctgggtcagaacatg
cgcgtagcgttcatgccgtggaacggctacaacttcgaagactccatcctcgtttccgag
cgtgttgtccaggaagaccgtttcaccactatccacattcaggaactggcgtgcgtgtcc
cgtgacaccaagctggggccggaagagatcaccgctgacatcccgaacgtgggtgaagct
gcgctctccaaactggatgagtccggtatcgtttatatcggtgcggaagtgaccggcggc
gacattctggttggtaaggttacgccgaaaggtgaaacccagctgacgccggaagagaaa
ctgctgcgtgcgatcttcggtgagaaagcgtctgacgttaaagactcctctctgcgcgta
ccgaacggtgtctctggtaccgttatcgacgttcaggtctttacccgtgacggcgtagaa
aaagacaaacgtgcgctggaaatcgaagagatgcagctgaagcaggccaaaaaagacctg
tctgaagaactgcagatcctcgaagccggtctgttcagtcgtatctacgcggtgctggtc
tccggtggcgttgaagctgagaagctcgacaaactgccgcgcgatcgctggctggaactg
ggcctgaccgacgaagagaaacaaaatcagctggaacagctggctgagcagtacgacgaa
ctgaaacacgagttcgagaaaaaactcgaagcgaaacgccgcaaaatcacccaaggcgac
gatctggcaccgggcgtgctgaagattgttaaggtatacctggccgttaaacgccgtatc
cagcctggtgacaagatggcgggtcgtcacggtaacaagggtgttatctctaagatcaac
ccgatcgaagatatgccgcacgatgctaacggtacgccggtagatatcgtcctcaacccg
ctgggcgtaccgtctcgtatgaacatcggtcagatcctggaaactcacctgggtatggct
gcgaaaggcatcggcgataagatcaacgccatgctgaaacagcagcaggaagtcgcgaaa
ctgcgcgagttcatccagcgtgcctacgatctgggcgctgacgttcgtcagaaagttgac
ctgaataccttcagcgatgaagaagttctgcgtctggctgaaaacctgcgtaaaggtatg
ccgatcgcaacgccggtgttcgacggtgcgaaagaagcggaaattaaagcgctgctgcag
ctgggcgacctgccgacttccggtcagatcaccctgttcgacggccgcaccggtgagcag
ttcgagcgtccggtaaccgtgggttacatgtacatgctgaaactgaaccacctggtcgac
gacaaaatgcacgcgcgttccaccggttcttacagcctggttactcagcagccgctgggt
ggtaaggcgcagttcggtggtcagcgcttcggtgagatggaagtgtgggcgctggaagca
tacggcgcagcttacaccctgcaggaaatgctcaccgttaagtctgatgacgtgaacggt
cgtactaagatgtataaaaacatcgtggacggcaatcaccagatggaaccgggcatgccg
gaatccttcaacgtactgttgaaagaaattcgctcgctgggcatcaacatcgaactggaa
gacgagtaa
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