Kryptolebias marmoratus (mangrove rivulus): 108231586
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Entry
108231586 CDS
T05608
Symbol
slc6a11b
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 3
KO
K05044
solute carrier family 6 (neurotransmitter transporter, GABA) member 11
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
108231586 (slc6a11b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
kmr02000
]
108231586 (slc6a11b)
Transporters [BR:
kmr02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
108231586 (slc6a11b)
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
108231586
NCBI-ProteinID:
XP_017264159
UniProt:
A0A3Q3FP76
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Position
LG4:9812493..9838891
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AA seq
611 aa
AA seq
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MTAEKSGPVINGKPEDGKDTEGSSSSLDSYEYNERGMWNNKIEFVLSVAGEIIGLGNVWR
FPYLCYKNGGGAFFVPYVIFFVCCGIPVFFLETALGQFTSEGGITCWRKVCPLFEGIGYA
TQVIEAHLNVYYIVILAWAIFYLFNCFTTELPWAGCGHYWNTENCVDYYGENATNITNPN
ATSPVIEFWERRVLKISDGIEHMGGVRWELAMCLALAWFICYFCIWKGPKSTGKVVYVTA
TFPYFMLMILLIRGVTLPGAFDGIKFYLYPDISRLSDPQVWVDAGTQIFFSYAICLGCLT
ALGSYNSYHNNCYRDCLMLCCLNSGTSFVAGFAIFSVLGFMAYEQNVPIEAVAESGPGLA
FIAYPKAVTMMPLSPLWACLFFMMLIFLGLDSQFVCVESLVTAVVDMYPETFRRGYRREL
LILGMSIVSFLIGLIMCTEGGMYVFQLFDAYAASGMCLLFVAIFESMCIGWVYGSDRFYL
NIEDMIGYKPVFFIKWCWMILTPGICAGIFLFFLIKYKPLKYNNVYIYPDWGYGIGWFMA
MSSMVCIPLGIIWMIWKTPGTFSERMKKLTTPSADLKMRGKHAALSPYAVNDAKLKVDGK
ISTISEKETHF
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgacagctgagaagagtgggcccgttataaacggaaaaccagaggatggcaaagacacg
gaagggtccagctccagcctggacagctatgagtacaatgagaggggcatgtggaacaac
aagattgagtttgtcctgtctgtggctggagagatcattgggctgggcaatgtttggagg
tttccttacctctgctacaagaatggaggaggtgccttctttgttccttatgtcatcttc
tttgtgtgttgcggtatccctgtgtttttcctggagacggccttgggtcagttcacgagt
gagggaggcatcacctgttggaggaaagtctgcccgttgttcgagggtattggctatgca
acacaggtgattgaagctcatctaaatgtgtactatatcgtaatcttagcctgggccatt
ttctacctcttcaactgcttcaccaccgagctgccgtgggccggctgtggacattactgg
aatacagaaaactgcgttgattattatggagaaaacgccaccaacatcacaaaccccaac
gcaacttctccagtcattgagttctgggaacgcagagtgctgaagatatcagatggcatt
gagcacatggggggggtgcgttgggagctggccatgtgtctggctctggcctggttcatc
tgctacttctgcatctggaagggacccaagtcaactggcaaggttgtgtatgtgacggct
acctttccatattttatgttgatgatcctgttgatcagaggagtcacgctgcctggagct
tttgacggcatcaagttctacctctacccagacatttcacgtctctccgaccctcaggta
tgggtggatgcaggaacccaaatcttcttttcctatgccatctgcttgggctgtcttact
gctcttggaagttacaattcctaccacaacaactgttacagagactgcctcatgctatgt
tgtttaaacagcggtaccagctttgtggcaggttttgccatcttttcagtgctgggcttc
atggcctacgaacaaaatgttcccatcgaagctgtggctgaatccggtcctggtctggcc
tttattgcataccccaaagctgtaactatgatgcctctgtctccactttgggcttgtctc
ttcttcatgatgctgattttcctcggcctggacagtcagtttgtgtgtgtggagagtttg
gtgacagctgtggtggacatgtacccagagaccttcagaagaggctaccgcagagagctg
ctgattcttggcatgtcgatagtgtccttcctcatcgggctcatcatgtgtaccgagggc
gggatgtacgtcttccagctgtttgatgcatacgctgccagcgggatgtgtttgctgttt
gtggccatatttgagtccatgtgtattggctgggtgtacggaagtgacagattctaccta
aatattgaggacatgattggctacaaacccgtcttcttcatcaagtggtgctggatgatc
ctgaccccgggcatctgtgctgggattttcctgttcttcttaattaaatacaaacctctg
aagtacaacaacgtctacatctatcctgactggggttatgggattggctggttcatggcc
atgtcctcgatggtttgcatcccactgggcattatctggatgatctggaagactcccggt
accttttctgagagaatgaagaagctgaccacgcccagcgcagacctaaaaatgcgaggg
aaacacgccgccctcagtccttacgccgtcaatgatgcaaaacttaaggtcgatggcaaa
atctccaccatctcagagaaagagacgcatttctaa
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