Kryptolebias marmoratus (mangrove rivulus): 108233643
Help
Entry
108233643 CDS
T05608
Symbol
snx18a
Name
(RefSeq) sorting nexin-18a
KO
K17923
sorting nexin-9/18/33
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108233643 (snx18a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
kmr04131
]
108233643 (snx18a)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
kmr04990
]
108233643 (snx18a)
Membrane trafficking [BR:
kmr04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
108233643 (snx18a)
Macropinocytosis
Sorting nexins
108233643 (snx18a)
Domain-containing proteins not elsewhere classified [BR:
kmr04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
108233643 (snx18a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3_WASP_bdg
PX
SH3_9
SH3_2
SH3_1
XFP
Vps5
Motif
Other DBs
NCBI-GeneID:
108233643
NCBI-ProteinID:
XP_017267725
UniProt:
A0A3Q3A7X5
LinkDB
All DBs
Position
LG1:25150490..25161944
Genome browser
AA seq
575 aa
AA seq
DB search
MALRARALYDFNSENQGELSVKENEILTLYSEQDIEGWLEGSNGRGERGLVPASYVEILK
NDAPSTANNNSCSTSGQSRYANVLTGGFENFSKPAAPSFGTSSAPLPQQHPQGYKQHSQG
SDDDWDDDWDDNSTVAEEPGSAGGRYNDFEGNGPSTYTVSTSTASRGNAQQARSSATVGR
NLNRFSTFVKSGGEAFVLGEASGFVKDGDKICVVMGQYGPEWQENPYPFTCTIDDPTKQT
KFKGMKSYISYKLTPTHTQTQVNRRYKHFDWLYARLVEKFPVISVPHLPEKQATGRFEED
FISKRRKGLIWWMNHMISHPVLARCDVFQHFLTCSSTDEKAWKQGKRKAEKDELVGANFF
LTISTPPTPLDFQEVESKIDGFKTFTKRMDDSSLQLNATVNEFARKQITGFKKEYQKVGM
SFKFLSQAFEMDQQVYSSGLNQAISFTGDTYEAIGEYFSEQPSKDLDPIMDLLALYQGHL
ANFPDIIHVQKGALTKVKESQKHVEEGKMDRTQAGGINDRCNIISCATLAEIQHFHQIRV
RDFKAQMQHHLQQQISFFQKITGKLEEALQKYDNA
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcagagccagggcgctgtacgacttcaactccgagaaccaaggggagctgtcg
gtgaaggagaacgagatcctgactttgtacagcgagcaggacatcgagggctggctggag
ggctcgaacggcagaggggaaaggggactggtccccgcgtcttacgtggagatcctgaaa
aacgacgctccctccacggcgaacaacaacagctgcagcacatctgggcagtccagatac
gccaacgtcctgactggaggctttgagaacttttccaaacccgctgctccaagcttcggc
acatcctcagcccctttaccccagcagcatccacagggctacaagcagcacagccagggc
agcgatgatgactgggatgatgactgggatgacaactccactgtggcagaggagccgggc
tcagcgggaggaaggtacaacgacttcgaaggcaatggaccctccacctacacggtgtcg
acatccaccgcgtccagagggaacgcgcagcaggcgaggagctctgccacagtgggcagg
aacctgaacaggttctccacctttgtgaagtccggaggggaggcgtttgtgctcggggag
gcgtcaggctttgtgaaagacggggataagatctgtgtggtgatgggtcagtatggcccg
gagtggcaggagaacccctacccgttcacctgcacgatcgacgaccccacgaagcagacg
aagttcaagggcatgaaaagctacatctcctacaagctgacccccacacacacgcagacc
caggtgaacaggaggtataagcacttcgactggctgtacgcccgcctagtggagaagttc
cccgtcatctcagtgccacacctgccggagaagcaggccacagggcgcttcgaggaggac
ttcatctccaaaaggaggaaaggcctcatctggtggatgaaccacatgatcagccaccct
gtcctggccaggtgcgacgtgttccaacactttctcacctgcagcagcacagacgagaag
gcctggaagcagggaaagaggaaggcggagaaggatgagctggtcggggccaacttcttc
ctcaccatcagcactccaccgactccactcgacttccaggaggtcgagagcaaaatcgac
ggattcaagactttcaccaaacgaatggacgacagctccttgcagctcaacgccactgtc
aacgagtttgcacgtaaacagattactggcttcaagaaggagtatcaaaaggtggggatg
tcctttaagttcctgagccaagcgtttgagatggaccagcaggtgtactcctcaggactc
aaccaggccatctccttcactggagacacgtacgaagcaatcggagaatatttctctgag
cagcccagcaaggatcttgacccaattatggatctcttagctctttaccaaggacacctg
gcaaacttcccagacatcattcatgtccaaaaaggagccctgacgaaggtgaaggagagc
caaaagcacgtggaggagggcaagatggaccggacgcaggcggggggcatcaacgaccgc
tgcaacatcatctcgtgcgccacgctggcagagatccagcatttccaccagatccgcgtg
cgagacttcaaggcccagatgcagcaccatctccagcagcagatttctttcttccaaaaa
atcaccggcaagttggaggaggccctgcagaaatacgacaacgcgtaa
DBGET
integrated database retrieval system
