Kryptolebias marmoratus (mangrove rivulus): 108233697
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Entry
108233697 CDS
T05608
Symbol
ufd1l
Name
(RefSeq) ubiquitin recognition factor in ER-associated degradation protein 1
KO
K14016
ubiquitin fusion degradation protein 1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108233697 (ufd1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
kmr03009
]
108233697 (ufd1l)
Ribosome biogenesis [BR:
kmr03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
108233697 (ufd1l)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UFD1_N1
UFD1_N2
CDC48_2
Motif
Other DBs
NCBI-GeneID:
108233697
NCBI-ProteinID:
XP_017267785
UniProt:
A0A3Q2ZP49
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Position
LG1:24519230..24522335
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AA seq
311 aa
AA seq
DB search
MFSFHHVFDHPMARGFQSRFSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRL
NITYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLMV
ATYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKA
VSIIECDMNVDFDAPLGYKEPERRSQNQEEPTEEEGDTSSYADMDTGFRAFTGSGNRLDG
KTKGIEPSPAPLAPNDIKRGIPNYDFKVGRITFIRNSRPQPRKIVEEDDSMNRFIAFSGQ
GQSLRKKGRKP
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgttttccttccaccatgtgttcgaccaccctatggcccggggctttcagagccgcttt
tccactcagtaccgctgctattcggtctccatgctggctggacccaacgaccgctccgac
gtagagaaaggaggcaaaatcataatgccaccttcagctcttgatcagctcagcagactt
aacatcacctatcctatgctgttcaagctgaccaacaagaactccgacagaatgacgcac
tgtggtgttctggagtttgtagcagatgaaggaatctgttaccttccacactggatgatg
cagaatcttctcctggaagaaggcggtctggtccaagttgaaagtgtgaacctgatggtg
gcaacctattcaaagttccagcctcaaagtcctgacttcctggacattacgaatcccaaa
gcagtcctggagaatgcgctgagaaactttgcgtgcttgacaactggcgatgtcatagct
ataaactataatgaaaagatctatgagctgcgagttatggagaccaagccagataaagcc
gtatccatcatcgagtgtgatatgaatgtggattttgatgctcctttgggttacaaggag
cctgagcgacgatctcagaaccaggaagaaccaacagaggaagagggagacaccagcagt
tatgctgacatggacacaggattcagagcttttaccggctctgggaatcgcctggatggc
aaaacaaaagggattgagccaagtcccgctcctcttgccccaaatgacatcaaaagaggc
attccaaactacgacttcaaagttggccggatcaccttcatcagaaactccagacctcag
cccagaaagattgtagaagaagatgactccatgaacagatttattgccttttctggacaa
ggacagtcgctacgcaagaagggcagaaagccttga
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