Kryptolebias marmoratus (mangrove rivulus): 108234076
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Entry
108234076 CDS
T05608
Symbol
capn1a
Name
(RefSeq) calpain 1, (mu/I) large subunit a
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04141
Protein processing in endoplasmic reticulum
kmr04210
Apoptosis
kmr04217
Necroptosis
kmr04218
Cellular senescence
kmr04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108234076 (capn1a)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
108234076 (capn1a)
04217 Necroptosis
108234076 (capn1a)
04218 Cellular senescence
108234076 (capn1a)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
108234076 (capn1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
kmr01002
]
108234076 (capn1a)
Enzymes [BR:
kmr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
108234076 (capn1a)
Peptidases and inhibitors [BR:
kmr01002
]
Cysteine peptidases
Family C2: calpain family
108234076 (capn1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_7
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
108234076
NCBI-ProteinID:
XP_017268467
UniProt:
A0A3Q3AV11
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All DBs
Position
LG22:complement(24704978..24715516)
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AA seq
704 aa
AA seq
DB search
MYLTGGISASIYANRLRAEGMGSVDRAVPFANQDYEALKQECVESGSLFEDPYFPAEPPS
LGFKELAPYSSKTRDVEWMRPTELADDPQFIVGGATRTDICQGALGDCWLLAAIASLTLN
ERLLHRVVPHGQSFQDDYAGIFHFQFWQFGEWVDVVIDDRLPVKDGELMFVHSAEGNEFW
SALLEKAYAKLNGSYEALSGGSTTEGFEDFTGGVSEMYELCKAPRDLYRIISKALERGSL
LGCSIDITSAFDMEAVTFKKLVKGHAYSVTGLKEVDYRGDMVRLIRIRNPWGQVEWTGAW
SDSSHEWDEIDPSEREDSHLNMEDGEFWMSFSDFLRQFSRLEICNLTPDVLSDDNLSHWN
TIKFFGTWRRGSTAGGCRNHPNTFWINPQYKITLLEEDDDPEDDEVACSFLVALMQKDRR
RYRRQGQDMHTIGFALYEIPEEYRGCQNVHLKKNFFLGHSSCARSETFINLREVSTRLRL
PPGEYLIVPSTFEPGKEADFVLRVFTEKQSETEELDDEVSADFGEEEEITEDDIDDSFKT
LFAQLAGEDMEISIHELRTILNRVVSRHKDLKTDGFSTESCRTMINLMDKDGSARLGLVE
FQILWNKIRKWLGIFREFDLDKSGAMSSYEMRLAVEAAGFKLNNKLNQILVARYAENEMI
DFDNFICCLVKLEAMFRSFQQFDKEGSGVAEMSLTEWLYLTMCG
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgtatctgactggagggatctctgcgagcatatacgccaacaggctccgggcagagggc
atgggctccgtggaccgagctgtacctttcgccaaccaggactacgaggccctgaagcag
gagtgtgtggagtcgggcagcctgttcgaggacccctacttcccggccgagcccccatct
ctgggcttcaaggagctcgcgccctactcctccaaaacccgagatgtggagtggatgagg
ccgacggagctggcagatgaccctcagtttattgtgggtggtgccaccaggacggatatc
tgtcagggagctcttggtgactgctggctgttggcagccatcgcctctttgaccctgaac
gagaggctccttcatcgggttgttccacacggccagtccttccaggatgattatgctgga
atcttccactttcagttctggcagttcggcgagtgggtagatgttgtgatcgatgatcga
ctgcctgtcaaagacggggagctcatgtttgtccattcagctgagggcaatgagttctgg
agcgcgctgctggagaaggcttacgccaagcttaatggctcctatgaggctctgtccgga
ggaagcaccactgaaggctttgaggacttcacgggtggtgtgtctgagatgtacgagctg
tgcaaggctcctcgagacctctacaggataatcagcaaagccttggagagaggctccctg
ctgggctgctctattgacatcaccagtgccttcgacatggaggccgtgacgtttaagaag
cttgtgaagggccacgcctactctgtcaccggactgaaggaggttgattaccgcggcgac
atggtgcgcctcatccgaatacgtaacccttggggacaggtggagtggactggtgcctgg
agtgacagttcccacgaatgggacgagatcgacccttcagaacgagaagactcgcacctt
aacatggaagacggggagttttggatgtctttcagtgatttcttgaggcagttttctcga
ctggagatctgtaacttgactccggacgttctgagcgatgacaacctcagccactggaac
accataaagttctttgggacgtggaggagaggcagcaccgccggcggctgcaggaaccat
cccaacacgttttggataaaccctcagtataagatcacgctgctggaagaggatgatgac
cccgaggacgacgaggtggcgtgcagttttctggtagccctcatgcagaaggaccgccgc
agataccggcgccaaggtcaggacatgcacacgatcggctttgctctctacgagatacca
gaagagtacagaggttgccagaatgtccatctgaagaagaacttcttcttgggtcattcg
tcgtgcgctcgttcggagaccttcattaacctgcgggaggtgagcacacgactgcgcctg
ccccctggagaatacctcatcgtgccctccaccttcgagcccggcaaggaggctgacttt
gtcctcagggttttcactgagaagcagtcggagacggaagaactggatgatgaagtatct
gctgactttggagaggaggaggaaataacagaggatgacattgatgactcctttaaaact
ttgtttgctcaactagcaggagaggacatggagatttccattcacgagctcaggacgatt
ctaaacagagttgtctccaggcacaaagacctaaagactgatggcttcagtacggagtcg
tgtaggacaatgatcaacctgatggataaagacggcagtgcccgtttaggactggtggag
tttcagatcctctggaacaagatccgaaagtggctgggtattttcagggagtttgatctg
gataagtcaggggcgatgagctcatacgagatgcgacttgctgtggaggcagcaggcttt
aaactgaataacaaactgaaccagattctggtggctcggtacgcagagaacgaaatgatt
gactttgataacttcatctgctgcttggtcaagcttgaagccatgtttagatctttccag
cagtttgacaaagagggctcaggagtggctgagatgagtctcacagagtggctttacctg
accatgtgtggctga
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integrated database retrieval system
