Kryptolebias marmoratus (mangrove rivulus): 108236580
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Entry
108236580 CDS
T05608
Symbol
ttc37
Name
(RefSeq) tetratricopeptide repeat protein 37 isoform X2
KO
K12600
superkiller protein 3
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108236580 (ttc37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kmr03019
]
108236580 (ttc37)
Messenger RNA biogenesis [BR:
kmr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
108236580 (ttc37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_14
TPR_17
TPR_8
TPR_16
TPR_12
TPR_CcmH_CycH
TPR_11
TPR_9
TPR_7
ANAPC3
ChAPs
ARM_TT21_C
PknG_TPR
TPR_15
COG4_N
Motif
Other DBs
NCBI-GeneID:
108236580
NCBI-ProteinID:
XP_017272832
LinkDB
All DBs
Position
LG1:15393677..15407959
Genome browser
AA seq
1565 aa
AA seq
DB search
MSNKEVKAALKSAKEAIKNKEFKEALKHCKTVLKLEKNNYNAWVFIGLAASELEQPDQSQ
AAYKKAVELEPEQLLAWQGLANLYEKTDQWDFKVELPNAYQKLVELYARSDKNKCYEVIR
KLSNIYQSDKEHLKLAKVWLQLVQLKEEEGVEKMELVHLLQKMIELLSECIKDEEQDNET
QQHLITAFEKSMMLTEPVPGEEHRKLTADYVNYLSKLPHEEAKMKEACRSMLSLYPNQTY
PLEVLCHHYLKTNNMDEDAVSCFSRLLELAPNSGLGRLGLGTKALGEGRYKDAVDDLKQG
LKKKSSSTGWCSLAEAQMKLHRYSDSATSCSQGLDVCTSEDMKLRDKLLRLKLEALVRTG
GEKAADEALQTFSQIQDADKDPALLVLKGHSFLIKGQIDQTLKLLSELEASHPNLAQGSA
LRGLTHSAEGQLQLAEQSFLKAAGQSPDCGEYCFLLGKLYWDMGPETRKDRSKAHTHLLK
AAKLDPNLGCAFRYLGHYYREVANDHGRAQGCYKKAFQLNSDDDESGSAAVDLSMGQGDM
DNALAILQSVIEKATPGSAKWAWMRRGLYYLKVGEHQRATADLQAALRADPEDWVCWECL
GEAYLNRQSFTAALKAFGKAHQLQPSSIYSVYQAAAIKQTLGKFKEAVAEYLQITTKQDY
VPALKGLGECQLSLAKSLMEDCRDGGAVDLIQQAIQNLFRAAKLRPDLSCLWKLLGDACT
AVAAVSPNRAKVLVPALLAGLDPSAQDHTLNQAEMLKVGERCYAHALKLMPEVASLWRDL
GLNYYHQATSRDQDSQPLHLEKAQQCLKKAIKMDSGNHSYWNALGVISMNKGLENYALAQ
HCFIKSIQAEPNNVVAWTNLGSLYLKKDNIELAHEAFKIAQSLEPLYVNCWIGQALIAER
VGSYDTMDLFRHTTELRTHMEGVKGYAYWVCSTLLDKKNRDTELYRYNIVQMNAISAAQV
ALSKYTERIQSDPDAFVMLGYLNEHLQLKMQALQAYQRAVELLQSVSSSEELAFTLGSYA
RALCNSGQWEEAVHVYNSTPLQGLGDLVGLALTYCRAGLFPESISTYERALAVASSEKDK
AYILTALAMLQHRQGNLDLAKTLLFKCSVLKEPISESLLCLCALGLAHRDATLTAAALTE
LLKQGSASGALVEQRCLLTCSLLALQGNYSAVQREASRAVHRNPGNPSLWALLSRVTPQH
YPRKANGGAVAGHVACLASMTQGKRALLYSGVNQLASGRHSGEAARRNALKMMQRAVLLC
PDDPAAWAGLMAACHTENTSCYLSGSAPRRQLLEHTLMLVVSDKVRGVEEIERPLAQSLE
GWVLQQAVTGLMLEGQLDQAEALCMQVLNVSPEHPAVMLSLRQVQCQRLFTADGGAVLPD
PVLEQLNKAVAMNPANLGAWHWLAEVYRSQGLLVQAVMAYRQSLQLALQLGVQSHQVASL
LRLALLALQPCMVGVAGNDWRDLVMEATTEVLKLGSSPMALLFQALLQFVTKMGARETRR
LLERLVYASSEDIPATVVQVASWYLLRHLHAKNDQELINVLLQHAKMNGNERLLELHSRL
TSSSS
NT seq
4698 nt
NT seq
+upstream
nt +downstream
nt
atgtctaataaagaagtgaaagctgcgctgaaaagtgccaaggaggccatcaagaacaag
gaattcaaggaggctttaaagcactgcaagactgttttgaaacttgagaagaacaactac
aatgcatgggttttcatcggcctggcagccagtgagctggaacagcctgatcagtcccag
gcagcctataaaaaggcagtggagctggagccggagcagctgctggcctggcaggggtta
gcaaatctttatgagaagactgatcagtgggatttcaaagtcgagctgcctaacgcctac
caaaaacttgttgagctgtatgcaaggtccgacaagaacaaatgctatgaagtgatcaga
aagctgtcaaatatttatcagtccgacaaggaacatttgaagttggccaaagtttggctg
cagctggttcagctgaaggaggaggagggcgtggagaagatggagttggtgcatctgttg
caaaagatgatcgagcttctttcagagtgcattaaagacgaggagcaggacaatgaaacg
cagcagcacttaatcacagcttttgagaaatccatgatgctcaccgaacctgtacccgga
gaggagcacaggaagctcacggccgattatgttaattatctttcgaaactgccacacgaa
gaagccaaaatgaaagaggcatgccggtccatgctgtcactctacccaaaccaaacttat
cctctcgaggttctttgccatcactatctcaaaacaaataatatggatgaggatgctgtg
agttgtttttcccgactcttggaactggctcccaacagtggtctcggtcgcttgggtctg
ggtaccaaagcgctcggggaagggaggtataaagacgccgttgacgacctgaagcaagga
ttaaagaaaaagagctcatcaacaggatggtgcagtctggctgaggctcagatgaagtta
cacagatactctgacagtgctacatcctgctcacaaggcctggacgtgtgcacgtctgaa
gacatgaagctgagggacaagctgcttagactgaagctggaggccttagtgagaactgga
ggagagaaggctgctgacgaggctctccagacattttcacagattcaagacgccgataaa
gaccctgcgctattagtccttaaaggtcattcattccttatcaaagggcagattgatcaa
acactcaagctgttgtcagagcttgaggcctctcacccaaacctggctcagggatcggca
ctgagaggactgacacattcagctgaaggtcagctgcagctggcagagcaaagtttccta
aaggctgcaggtcagagcccagactgtggggaatattgtttcctgctcggaaaactctac
tgggacatggggccggagacccgaaaagatcgaagcaaagcccacacacacctattaaag
gctgcaaagttggatccaaacctgggctgtgcatttcgctacctgggccattactatcgg
gaggtggcaaatgatcatggccgtgctcagggctgctacaagaaggcttttcagctgaac
agtgacgatgacgagtccggatctgccgctgtggatctcagtatgggacagggagatatg
gacaacgctttagccatccttcagtcggtgatagagaaagccactccaggctcggctaag
tgggcctggatgagacggggcctgtactacctgaaggtcggagaacatcaaagggccaca
gctgatttgcaggcagctctgagagcggaccccgaggactgggtgtgctgggaatgttta
ggtgaggcttacttgaacaggcagagcttcacagcggccctgaaggcgtttggcaaggcc
catcagcttcagcccagctccatctacagtgtctaccaggcagctgcgatcaaacagacc
ctgggcaagttcaaagaggcagtggcagagtacctgcaaatcacaacgaagcaggattac
gttcctgctcttaaaggactcggggagtgccagttgtctttggcaaaaagtttaatggag
gactgccgagatggaggagctgttgacctcattcagcaagctatacaaaatctcttcaga
gctgcgaagctgagacccgacctgtcttgcttgtggaaacttctgggagacgcctgcact
gctgtcgccgctgtttcaccgaacagggccaaagtcctggtgcctgcgttattggccggt
ttggatcccagcgcccaagatcacacactaaaccaggccgagatgctcaaagttggcgag
aggtgctacgctcacgctttgaagttgatgcctgaggtcgccagtctttggcgcgactta
ggcctcaactattaccatcaggccaccagccgagaccaggactcccaacctctgcactta
gagaaagctcagcagtgcttgaaaaaggctattaagatggacagtgggaaccacagctac
tggaatgccttgggagtgatctccatgaacaaaggtctggagaactacgctctggctcag
cattgcttcatcaagtccatccaagctgagccgaataatgtagttgcgtggacaaacctt
ggaagcctgtatttaaaaaaggacaatatagagcttgcacacgaggcctttaaaattgct
cagtccttggagccactgtatgtgaactgctggattggacaggcgctgatagcggaacgc
gtgggaagctacgacactatggatcttttcaggcacactacagagctccgcacacatatg
gagggcgtgaaaggttacgcctactgggtgtgttccaccctgctggacaagaagaacaga
gacacggagctgtaccgctacaacatcgtgcagatgaacgccatctctgctgctcaggtg
gcactcagcaagtacacagagcgaatccagtccgaccccgatgccttcgttatgctggga
tacctgaatgaacacctgcagctgaagatgcaggccttacaggcgtaccaacgggcagtt
gagctgcttcagtctgtgtcctcttcagaagagctggcttttactcttggcagctatgct
cgggctttatgtaattcaggccaatgggaggaggcggtgcacgtgtataattccactcct
ctgcagggtctcggcgacctggtcgggctggctctgacctactgcagggcgggactcttc
cctgaaagcatcagcacttatgagcgagccttggccgtggcttccagtgagaaggataaa
gcttacatattgacagctctggccatgctgcagcaccggcagggcaacctggacttagcc
aagactctgctctttaaatgctcagtgctgaaggagccgatctcggagtctctgctgtgc
ctgtgcgccttgggactggcccaccgcgatgctacgctcactgccgctgccctgacggag
ctcctgaagcagggttcagcctcgggggcgcttgtggagcagcggtgcctgctcacctgc
tccctgctggcccttcagggcaattacagtgcggtacagagagaagcctccagagccgtg
cacaggaatcctggaaacccgtctctctgggctcttttgtccagagtgactccacagcac
taccctagaaaggcaaatggtggagcagtagccggtcatgttgcctgtctcgctagtatg
acccaaggaaagagggcgctgctgtacagcggggtgaaccagctggccagtgggaggcac
tcaggagaggccgctcggaggaatgccctgaagatgatgcagagagccgtattgctctgt
cctgatgatccagcagcgtgggcaggattaatggctgcctgtcacacagaaaacacttcc
tgttatctttctgggtctgctcctcgcaggcagttgctcgagcacacgctcatgttggtg
gtttctgacaaagtgcgtggtgtggaagagatcgagcgccctctggcccagtctctggaa
ggctgggtgttacagcaggccgtgaccggcctcatgctggagggacagctggaccaggct
gaggctctctgcatgcaggttctaaatgtgtcccctgaacacccagcagtgatgctgtca
ctgagacaggttcagtgtcagcgcctcttcacggctgatggtggcgctgtcctcccagac
cctgtcctagagcagctcaataaagctgtggcgatgaaccctgctaaccttggagcgtgg
cattggctggctgaggtgtatcggagccagggcctgctggttcaggctgtcatggcgtac
aggcagagtctgcagctcgccctgcagcttggcgtgcagagccaccaggtcgccagcctg
ctccgacttgctctgctggcattacaaccctgtatggtgggcgtggcaggaaacgactgg
agggacctggtgatggaagccaccacagaggttttgaagctgggctcatcccccatggcc
ctgcttttccaggccttacttcagtttgtgaccaaaatgggtgctagggagacgaggcgc
ctgctggagagactggtatacgcttcatctgaggacatcccagcgacggtggtgcaggtg
gccagctggtacctcctcagacacttgcatgcgaaaaatgaccaggaactcatcaatgtc
cttttgcaacatgccaaaatgaatggaaatgaaagactgctagagcttcactctcggctt
acctcctcttcatcctga
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integrated database retrieval system
