KEGG   Kryptolebias marmoratus (mangrove rivulus): 108240146
Entry
108240146         CDS       T05608                                 
Symbol
chd1l
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1-like isoform X1
  KO
K20092  chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
kmr  Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:kmr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:kmr03036]
    108240146 (chd1l)
Chromosome and associated proteins [BR:kmr03036]
 Eukaryotic type
  Chromatin remodeling factors
   Other chromatin remodeling factors
    108240146 (chd1l)
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C HDA2-3 ResIII DEAD LIG3_BRCT AAA_22 IBB BRCT_2 AP3D1 ERCC3_RAD25_C CDKN3
Other DBs
NCBI-GeneID: 108240146
NCBI-ProteinID: XP_017278855
LinkDB
Position
LG24:complement(18859617..18874395)
AA seq 1041 aa
MAHFLLKIKSRIAEKTKKAPFSQSDVEKFGLTGIQLRGYQLDGVQWLTECLKNQQGCILG
DEMGLGKTCQTISLLLYVSGALGKKVPFLVLSPLSVLENWRKELERFAPSLAVLCYKGDK
ERRAEVQRETKTRHFHVLLTTYELCLKDASFLKRWSWKVLVVDEAHRLKNQNSLLYRTLT
EFSVGFRVLLTGTPIQNDLQELYSLLSFVQPSVFAAEDTGSFVDAYANVRNQPGLAAELQ
SVLEPFLLRRVKSEVAVDLPKKTELVVYHGMSALQKKYYKAVLMKDAEAFGNAHGSKNRL
LNILMNLRKCVNHPYLFDGVEPEPFEMGEHLIEASGKLSLLDSLLAFLHKGGHRILLFSQ
MTRMLDILQDYMEYRGYSYERLDGSVRGEERNLAVKNFSSKDIFVFLLSTKAGGVGMNLT
AADTVIFVDSDFNPQNDLQAAARCHRIGQNRPVKVIRLLARDTVEEIMYSRAVSKLQLTN
TVIEEGRFSLLDQAQSAAAGLQLSEILKFGIDTLLSSDESSIQEVKLGKILGASCGGQWM
DDEDLSPLEEEEEETEDGSESEVQNHMYLFEGKDYSKDPSSEDQKSFERLLEEQLAEFQK
AAGEGRALRHKAGVSLSVALGIPARKRKPLSETELELRRQRREEAAAKRAKTQEDTKKRQ
QEQKQKKKMAWWESCGYRSFCLPAVDSEEEEEEEDDSSMWSTDSNSTDIHYVLGDVTHPH
TAKGDAVIVHCVDDSGRWGRGGLFTALEVRSDEPRKQYELAGKMKDLELGNVLLFPIDDK
QSRLDGQDRLALIVAQQRHKSNNLSGILLSALDEGLSKISTAAKRSKASVHLPRIGHATK
GFNWYGMERLIRKHLASRGVPTFMYPLTAQHFKKNTFNLFNFLISLNLSARYYHNRAARN
PATPQGPSTSGAAPEAAPLSSDRPTKTEAEVPGPSAPRHGFGSAELPSFMKGVRVFFYNV
PASERKRLARYLITYDGDEEDVMSAEVTHIVAEVENNIHTQELQELLGQYTEAVPVQKAW
LESCFSKQQKVNTAQFLHPLR
NT seq 3126 nt   +upstreamnt  +downstreamnt
atggcacactttttattaaaaataaaaagccgaatcgcggaaaaaacgaagaaggcgcct
tttagtcagagcgacgtggagaagtttggtttaacaggaatccagctgagaggataccag
ctggacggggtgcagtggctcactgagtgtctgaagaaccagcagggctgcattttagga
gatgagatgggtttgggcaaaacctgccagacaatctctctgctgctctacgtgtcagga
gctctggggaagaaagtcccatttttggtcctgagcccactctctgtcctagagaactgg
aggaaggagctggaacgcttcgctccgtccctggcggtgctgtgctacaaaggagacaaa
gagagacgggctgaggttcagagggaaacaaagacacggcactttcatgttctgctcacc
acatacgagctgtgcctcaaagatgcttcgttcttgaaaaggtggagctggaaggttctt
gttgtagacgaagcccacagactgaagaatcagaactcgttgttgtacagaacgttaacg
gagttctctgttggtttcagagtcctgctgactgggactcccattcagaacgacctgcag
gagctctactccctgctgagcttcgtccagcccagcgtcttcgcagccgaggacacgggc
agcttcgtggacgcttacgccaacgtgcggaaccaacccggcctggctgcagagcttcag
agcgtcctggagcccttcctgctccgtagagtcaaatcagaggtggccgtcgatctgccc
aagaagacggagctggtggtgtaccacggcatgtcggctctgcagaagaaatactacaag
gccgttctgatgaaggatgccgaggcttttggaaacgctcacggcagcaagaacaggctg
ttgaacatcctaatgaacctgaggaagtgcgtcaaccatccgtacctgtttgacggggtg
gaacccgagccctttgagatgggggagcatctcattgaagcgagtgggaaactgagcctc
ctggacagcctgctggccttcctgcacaaagggggccacaggatcctgctgttctctcag
atgacgaggatgctggatattcttcaggactacatggagtacagaggttacagctacgag
cggctggatgggtctgttcgaggcgaggaacgaaacctagcagtgaagaacttcagcagc
aaagatatttttgtctttttactcagcactaaagcaggcggcgttggcatgaacctcaca
gccgccgacacggttattttcgtggacagtgacttcaaccctcagaacgacctgcaggct
gcagcacgctgccatcggattggtcagaacaggcccgtgaaggtgatccgcctccttgcc
agagacaccgtggaggagatcatgtactcccgtgctgtatccaaactgcagctcaccaac
accgttatcgaagaaggacgcttctctctgctggaccaagctcagtccgccgcagcagga
ctgcagctgagtgagatcttgaagtttgggatagatacgcttttgtcgtcggatgagagc
tccatacaggaagtaaagctggggaagatcctcggcgcgtcatgcggtggtcagtggatg
gacgatgaggacttatcacctctggaagaagaagaagaagagacagaggacggatctgaa
tctgaagtgcagaaccacatgtacttgttcgagggcaaagactacagtaaggacccaagt
tctgaagaccagaagagcttcgagcgcttgttggaggagcagctggctgagtttcagaaa
gctgcaggagaggggcgagctctgcgacacaaagctggagtttcactgtcagtagcactt
gggatcccagcgaggaagaggaaacctctctctgagacggagcttgagctccgacgtcag
agacgggaagaggcggcagccaagagagccaaaacgcaggaggacacgaagaagcgccaa
caggagcaaaaacaaaagaaaaaaatggcatggtgggagtcctgtggctacaggtcattt
tgtctgccggctgtggacagtgaagaagaggaggaagaggaagatgatagcagcatgtgg
tccacggactctaactctacggatatccactatgttctgggagatgttactcatccgcac
actgctaagggagatgctgtcatcgtccactgtgtcgatgactcaggccggtggggcaga
ggaggcctatttacagcgctggaggtgagatcagacgaaccacgaaagcagtatgagttg
gcaggaaagatgaaagatctggagcttggaaatgtgctgctcttccctatcgacgacaaa
cagtccagactggacggccaagatcgattagccctgatagtggcacaacaaagacacaaa
tccaacaacctgtctgggatcctcctgagtgctctggatgaaggactgagcaagatttcc
accgcagccaagagaagcaaggccagtgttcatcttcctcggatcggccacgccaccaag
ggtttcaactggtacggcatggagaggctcatcaggaaacacctagcttccagaggcgtc
cccaccttcatgtatcctttaacagctcaacactttaaaaaaaacacatttaatttattt
aattttttaatttcacttaacctatctgccagatactatcacaacagagctgccaggaac
ccagctacaccgcagggcccttcaacatcaggcgccgcccctgaagcagcgccgctcagc
tccgacagaccaactaagactgaagcagaggtcccgggcccctcggcgccacgccacggt
ttcggctctgcagagctccctagtttcatgaagggggtccgagtcttcttctacaacgtt
cctgcatctgagcgaaagaggctggcccgctacctcatcacgtatgatggagatgaggag
gacgtcatgagcgcagaggtcactcacatcgtggcggaggtggaaaacaacatccacaca
caggagcttcaggagctgctgggtcagtacactgaggccgtccctgtccagaaggcctgg
ctggagtcctgcttctccaaacaacaaaaagtcaacactgcacagttcctacatccgctt
cggtag

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