Kryptolebias marmoratus (mangrove rivulus): 108240585
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Entry
108240585 CDS
T05608
Symbol
gabra6a
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6a
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108240585 (gabra6a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
kmr04040
]
108240585 (gabra6a)
Ion channels [BR:
kmr04040
]
Ligand-gated channels
GABA-A
108240585 (gabra6a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
108240585
NCBI-ProteinID:
XP_017279656
UniProt:
A0A3Q3F346
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Position
LG9:14977864..14983307
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AA seq
436 aa
AA seq
DB search
MAAASLTLVAFICWISVGNVQGTEKIDSDNITRILDRLLDGYDNRLRPGSGGGITEVKTD
IFVTSFGPVSDVEMEYTMDMFFRQMWVDERLKFDGPTEILRLNNKMVEKIWTPDTFFRNS
RKSISHNMTTPNKLFRIMQNGTVLYTMRLTINAECPMNLMDFPMDGHTCPLRFGSFGFTS
SEILFTWRKGLKSSVECPKESMSLLQYDLVGQTLSSETLKFNTGHYSVQVVHFHLQRKLG
YYLIQTYIPLIMIVILSQVSFWINKESVPARTVAGITTVLTMTTLSISARQSLPKVAYAT
AMDWFIAVCFAFVASALVEFAAVNYFATLQANRLKKQKARQDKLEVLAAGSEDDDTISSD
SSPRGGLRRRNHSESYSEPHLPIFLQQGSAFPQFPQLAGTSRIDVYARVLFPLTFALFNL
VYWYTYLARDTMQAAS
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgcctcattaactttggttgcgtttatctgttggattagtgtaggtaatgta
caaggaaccgaaaagatagactcagacaacatcactcgcattttggatagacttttggac
ggatatgacaatagactgcgacctggatctggaggtgggattacagaagtgaaaacagac
atctttgtcaccagttttggaccggtttcagacgttgagatggagtacaccatggacatg
ttcttccgtcaaatgtgggttgacgagaggctcaagtttgacggtcccacggaaattttg
cgtctgaacaacaaaatggtggaaaagatttggacgccagacactttctttaggaattcc
agaaagtccatttcccacaacatgaccacacccaataaactctttcgcatcatgcagaat
gggacagtcctctacaccatgagactaacaatcaacgcagaatgtccaatgaatctcatg
gatttccctatggatggccacacctgtcctctcaggtttggaagctttggatttaccagc
agtgaaattcttttcacctggaggaaagggctaaaatcatctgtcgagtgtcccaaagag
tcaatgagtcttctgcagtacgatcttgtgggacagactttgtccagtgagactctgaag
ttcaacacaggtcactactctgtgcaggtggtccatttccacctgcagaggaagcttggc
tactacctcatacagacctacatccctcttataatgatcgtcatattgtctcaagtctca
ttttggatcaacaaagagtcggtccctgcgcgcacagttgccggcatcaccacggtgctg
accatgaccaccctgagcatcagcgcccgccagtctttgcccaaagtcgcctacgccaca
gccatggactggttcatcgctgtgtgttttgccttcgtggcgtccgccctcgtcgagttt
gcggcggtgaactactttgccaccttgcaggcaaaccgcctgaagaagcaaaaagccaga
caggacaagctggaggtgctggccgccggcagcgaggacgacgacacgatttcgtcggac
agcagcccccggggaggcctgaggaggaggaaccactcggagagctacagcgagcctcac
ctgccgattttcctgcagcagggttcggcgtttccccagttcccgcagctggcagggacg
agccggatcgacgtctacgcccgcgtcctcttccccctgacctttgccctcttcaacctg
gtttactggtacacctacctggccagggacaccatgcaggcggccagctga
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