Kryptolebias marmoratus (mangrove rivulus): 108242409
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Entry
108242409 CDS
T05608
Symbol
cngb1a
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-3
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
108242409 (cngb1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
kmr04040
]
108242409 (cngb1a)
Ion channels [BR:
kmr04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
108242409 (cngb1a)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
108242409
NCBI-ProteinID:
XP_037835916
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Position
LG15:30308152..30382411
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AA seq
1264 aa
AA seq
DB search
MLSWVVKVVPQPPEPPSNNTDDQKEEKVAAAPPPAHEKKVTFEDECKHEAAKPENLKDMQ
TAAGNGPAPGVLTWISSALPQPTIPANINTKDEAAAASSKPDDETGMIAWISQGLEKVVP
HLELKSKDLSAAEQQVQVHQTAAPPESQTTAKEVEQTEKTTPPSMIDWIKHGIEKVVPQP
EIYSKTDVLPPAPPPAVKPPTKTESVQEADHQPNMMGWIVSGIGRMLPRPVAKLDAGGDE
LQNISITQKKMDLVLEDLEEELKIEVKEQSEGTEQRSTKKMDNAETQVDQLSPVVESIKK
EAEEVVLAHMEERLQQERLEAARVAEEMARKAAEEAVRLLEVEQSAKILIETLPEIIEQL
PNILEEENEDDPELQNLQEDSDDSTDNRSSEQHKAMEEDKNKSSKEKKLDQCLLDISPAQ
EGPETEEPMAPPTLSESAAQVSPFSTDAEPGSEKKDLESPVTHQPEPQSSQDPCTTTKQP
VAAAEEEAGSGENSSKGLNEALKQKVENTDREAVHKHNLNIPQIITTPEPETNSQMIPEF
SKGDLSANEEDEELLKVSMKTWSSQGDLLTADDEMRPLSTASIGSTGVQDRLNELIKLFK
GRTERQKDRLVDPDASEDESPTASPSKAPPPPPPPPPPEGEKKDDTTAAQEQDEGEEFQF
ELLGYPVKIPKPPPIPDWLQAVLEYRFPSSIDPFTDIIYVVWLFFVVAAWNWNVWLIPIR
WAFPYQTTENIHLWLLADYTCDFIYIADIVIFQPRLQFVRGGDIVCDKKDMREHYMTTER
FKMDLISLFPMEILYFFTGVNPLLRFPRLLKYMVFFEFNDRMEAVMKKAYIYRVIRTSTY
LLYSLHINACLFYWGSDYEGLGSTKWVYNGKGNAYIRCYYFAVKTLITIGGLPDPTTVFE
ICFQLINYFVGVFAFSIMIGQMRDVVGAATAGENYYRACMDSTVKYMNSYSIPREVQNRI
KTWYDYTWKIQGMLDEQELLVQLPTKMRMDIAVDVNYSIVSKVALFQGCDRQMVFDMLTR
LKSVVYLPGDFVCKKGEIGREMYIIKQGEVQVVGGPDLQTVFVTIRAGSVFGEISLLAGG
GGNRRTANVKAHGFANLFILDKNDLAEILVHYPESQKLLRKKAKKMLTKDKKPDEKEAQK
EAAEVIPTRSDTPKLFKAALKVTEQAGIEGTFAKLKKVYRPPQISAEAPPTLSPVPPPSP
MHRRSPAHQSAALEDGDESVAETADSSVIIRMTPRQQGEEVLTVEVAAAEEEADEKMEDE
KEEK
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atgttgagttgggtggttaaagttgttccccagccacctgaacctccatccaacaacaca
gatgatcaaaaggaggagaaagtagctgcagctccgccccctgcccatgaaaagaaggtg
acttttgaagacgagtgcaaacatgaggctgccaaacctgaaaatttaaaggacatgcag
acagccgcagggaatggtccagctcctggtgtgttgacgtggatcagcagcgctctgcct
cagccaacaattccagccaacatcaacaccaaggatgaagctgcagcagccagcagtaaa
ccagatgatgagacagggatgattgcctggatttcacagggtttggaaaaagttgttcct
catcttgaactgaagagcaaagacttatctgcagcagagcagcaggttcaggtgcatcaa
acagcagctccaccagaatctcaaactactgcaaaagaagtggaacaaactgagaagaca
actccgcccagcatgattgactggatcaaacatggcattgagaaagtggttccccagcca
gagatctactcaaagacagatgttctacctccagctcctcctccagccgtcaaaccaccc
acaaaaacagagtctgttcaggaagcagatcaccaaccaaatatgatgggctggatcgtc
agtggaattggtcgcatgctgcctcggcctgtagcgaaactggatgcaggaggtgatgag
ttgcagaacatcagcatcactcagaagaagatggacctggtactcgaggatctggaggag
gagctcaagattgaggtgaaggagcagagtgaaggaacagagcaacgctccacaaaaaag
atggacaacgccgagacccaggtggatcagctgagtccagtggtggaaagtatcaagaag
gaggctgaggaggtggtccttgctcacatggaggaaaggctgcagcaggagcgtctggag
gcagcccgtgttgctgaggagatggccagaaaggcagcggaggaggcagtccgactgtta
gaggttgagcagtcagctaagatcctcatcgaaaccctgccagagatcattgagcagctg
cccaacatcctggaggaggaaaatgaagatgatccagagttgcagaacctgcaggaggac
agtgacgacagcacagacaataggagttcagaacaacataaagccatggaagaggataaa
aacaaaagttctaaagagaaaaaacttgatcaatgtctgttagacattagtccagctcaa
gagggtccagaaacagaggaacctatggctccgcccactttatctgagtcagcagcgcaa
gtcagtcctttctcgactgatgcagaaccaggatcagagaagaaggacctggagagtcca
gtaacccatcagccagaaccacaatcttcacaggacccatgtaccaccacaaagcagcct
gttgcagcagcagaagaagaagctggatcgggagaaaacagcagcaaaggtttgaatgaa
gctctgaagcagaaggtggagaacacagatcgagaagcagtgcacaaacacaacctgaac
atacctcaaattatcacaacaccagaaccggagaccaattctcagatgatcccagagttc
agtaaaggtgatctatcagcaaatgaggaagatgaggagctgctgaaggtcagtatgaag
acctggtcaagtcagggagatctgctgactgcagatgatgaaatgcgaccactgtccact
gccagcatcgggagcactggcgtacaggaccgtctgaatgagctgatcaagctcttcaaa
ggtcgaacagaacgccagaaagaccggctggtggacccggatgcatctgaggacgagagt
cccacagcctccccaagcaaagctccaccgcctcctcctccaccaccccctccagaaggg
gagaagaaggatgacacgacagcagcacaggaacaagatgagggggaggaatttcagttt
gaacttctggggtatccagttaaaattcccaaacctcccccgattcccgactggctgcaa
gctgtcctggaataccgcttcccctctagtattgacccatttactgatataatttacgtg
gtctggctgttctttgtggtggcggcatggaattggaatgtgtggctgatccccatccgc
tgggcattcccctaccaaacaactgaaaacatccacctgtggctgttggctgactacacc
tgtgacttcatctacattgctgacatagtgatcttccagcccagactgcagttcgtccgt
ggaggagatattgtgtgtgataaaaaggacatgagagaacattacatgaccactgagagg
tttaagatggacctcatcagtctgtttcccatggagatactttacttcttcacaggggtg
aaccctctgttgagatttcctcgtctgcttaagtacatggttttctttgagtttaacgac
aggatggaggctgtcatgaagaaagcatacatctacagggtgatccggacctccacctac
ttgctgtattctctgcacatcaacgcttgtctcttttactggggttctgactatgaagga
ctgggatccactaaatgggtctacaatggaaaaggcaatgcttacattcgttgttactac
tttgctgtgaaaacactgatcaccatcggaggactgccggaccccaccactgtctttgag
atctgcttccagctcatcaactactttgttggtgtctttgctttctccatcatgattggc
cagatgagggatgtagttggagcagcaactgccggggagaactactaccgagcctgtatg
gacagcactgtcaagtacatgaactcctatagcattcctcgagaagttcagaaccgcatc
aaaacctggtatgactacacctggaagatccagggcatgctggatgaacaggagctgttg
gtgcagcttcctactaagatgaggatggacattgcagtggacgtgaactactccatcgtc
agtaaagtggccctgtttcagggctgtgacaggcagatggtgtttgacatgttgaccagg
ctcaagtctgttgtgtacctgcctggagactttgtatgtaagaagggggaaatcggaaga
gagatgtacatcatcaaacagggggaggttcaggtggtgggtggtccagacctgcagacg
gtgttcgtcaccatcagagctggctcagtgtttggcgagatcagtctgcttgcaggaggt
ggaggaaaccggcgaactgcgaacgtgaaggcacatggatttgccaacctcttcattctg
gataagaacgacctggcagagattcttgttcattaccctgagtctcagaaactcctgcgt
aagaaagcaaagaagatgctgacgaaagacaaaaagcctgatgagaaggaggcccagaaa
gaggcagcagaggtcattcctaccagatccgacacccccaaactgttcaaggctgctctg
aaggtgacggagcaggcgggcatcgaaggaacatttgccaagctgaagaaggtctacaga
ccacctcagatctctgcagaggcgcctcccaccctttctccagtcccacctccgtctccg
atgcaccggcgctctccagcccatcaaagtgcagcactagaagatggagatgagtcagta
gcagagacagcagacagctctgtcatcatcaggatgacgccacgacagcaaggggaggag
gttctaactgtggaggttgcagcagctgaagaagaggcagatgagaagatggaggatgag
aaagaggagaaatga
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integrated database retrieval system
