Kryptolebias marmoratus (mangrove rivulus): 108247006
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Entry
108247006 CDS
T05608
Name
(RefSeq) LOW QUALITY PROTEIN: calpain-1 catalytic subunit-like
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04141
Protein processing in endoplasmic reticulum
kmr04210
Apoptosis
kmr04217
Necroptosis
kmr04218
Cellular senescence
kmr04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108247006
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
108247006
04217 Necroptosis
108247006
04218 Cellular senescence
108247006
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
108247006
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
kmr01002
]
108247006
Enzymes [BR:
kmr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
108247006
Peptidases and inhibitors [BR:
kmr01002
]
Cysteine peptidases
Family C2: calpain family
108247006
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
CAPN13-like_C_EFh
EF-hand_6
EF-hand_1
EF-hand_7
Na_Ca_ex_C
Motif
Other DBs
NCBI-GeneID:
108247006
NCBI-ProteinID:
XP_017290319
LinkDB
All DBs
Position
LG10:complement(20371300..20382636)
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AA seq
693 aa
AA seq
DB search
MPPPGVCQSIMNARHKKDGYGTLTNPDRFFQQDYKIMKEYCLIRNLRFVDDMFPPDKKSI
GEGILSPTDMAQVQWLRPAEIAPNPSFVLDGISRFDFGQGLVGNCWFLASIGALTFQPNI
LKQVVPLEQMFDMKYCGLFHFRFWRFGRWVDVIIDDKLPTINGKLIFVRSKDKNEFWPPL
LEKAYAKVCGSYMDMTSGTPAEAMRDFTGGVHMCIPLSKPSNLWKLLCRAGESKTLMSCG
THRGKTSTNTVLPNGLVQGHAYTVTGFKQIVSQGKVVNLVRLWNPWGKREWNGDWSDRSS
LWQTXSSADRKKCLSVADDGEFWMTMEDFCKFYSDIDICGMSPDFLDENSSSHWKTSEYE
GRWVAGTTAGGCFKNKGSFWTNPQYRIKVCEKPSENNDAKNILVSLMQKPDKRNRRLVQS
LHIGLAIFQITEQYKTHNGKFPASFFSNQTPIAQTQTYMNAREVMEFLLLKAGEYVIVPS
TFNPNETASFILTILSREDTHCYENSSHHRHESIEKVKKIKNKKDNENKKQLFRQFSDKY
EEVDAEQLQKLLNEQILKGDLKSGGFSIDACRSMVALMDTSTTGKLNGEEFVRLWNKVMK
YKDIFYLTDTDKTGTLSLSELRNAFIASEIKTSDEILNLMALRYGASSGHMTLESFISLM
LRLDCMLKIFQRISDGKSMKLDETEWLGLSMYT
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctccaggtgtttgccaaagcatcatgaatgcccgtcacaaaaaagacggttat
gggactctcaccaacccagatcggttcttccaacaagactacaagattatgaaagagtac
tgcctcatcagaaatcttagatttgttgatgacatgttccctcctgacaagaagtccatc
ggtgaggggatcctgagccccactgacatggcccaagtgcagtggctgagaccagcagaa
attgctccaaatccatcatttgtgcttgatggcatttccaggttcgactttggtcaagga
cttgttggaaattgctggtttcttgcttctattggagcgttgacgttccagcccaacatc
ttaaaacaagttgttcctcttgagcaaatgtttgatatgaaatactgcggactgtttcat
ttcaggttctggagatttgggcggtgggtggatgtcatcattgatgacaagctgccaaca
atcaatgggaaacttatttttgttcgctccaaagacaagaacgagttctggcctcctttg
ctggaaaaggcctacgccaaggtgtgcggatcctacatggacatgacctctgggactcct
gcagaggctatgagggacttcaccggtggcgtccacatgtgtatcccgctgtccaaacct
tcaaatctgtggaagttgctgtgcagagctggagaatccaagacactcatgagttgtggc
acacatcgaggaaagacgtctaccaacactgtgttaccaaatggattggtccaaggacac
gcctacactgtaacaggtttcaaacagattgtgagccaaggaaaagttgtgaacctggtt
cgcctgtggaacccctggggcaaaagagaatggaatggagactggagtgatcgatcctct
ttgtggcaaactnngagctctgctgatcgtaaaaagtgcctttcagtggctgatgatgga
gagttttggatgaccatggaagatttttgcaagttttacagcgatattgacatctgtggc
atgagtccagacttccttgatgaaaactcgtccagtcactggaagacatctgagtatgaa
ggacggtgggtcgcaggaaccacagctggaggctgcttcaaaaacaaaggcagtttctgg
acaaatccacagtatcgcatcaaagtctgcgagaaaccttcagagaacaatgacgcaaaa
aacatcctggtatctctcatgcaaaagcctgacaagaggaacagacgtctggtgcaaagc
ctccacatcgggttagctatattccagatcactgaacaatacaaaacgcacaacgggaag
tttccggcctcgttcttcagcaaccaaacacccatcgctcaaactcagacctacatgaac
gcacgggaggtaatggaattcctgttgctgaaagcaggagagtacgttatcgtcccgtca
acatttaacccaaacgagacggcctccttcatcctcaccatcctctccagggaagacact
cactgctatgaaaactctagtcaccaccggcatgagtcaattgagaaagtcaagaaaatt
aagaacaagaaagacaacgaaaataaaaaacaacttttccgccagttctcagacaagtat
gaagaggtggatgctgagcagctgcagaagcttctgaatgaacagatcttgaaaggggat
ttaaagtctggaggcttcagcattgatgcatgtcgcagcatggttgcactgatggacaca
tcaactacagggaaactgaacggtgaagaatttgtgcgtctgtggaacaaagtcatgaaa
tacaaggatattttctacctgactgacacggacaaaacaggaacactgtcactgagtgag
ctgaggaacgccttcatagcttcagaaataaaaaccagcgatgagattctcaacctgatg
gctctgcgttacggtgcctcctctggtcacatgactctggagagcttcatcagcctcatg
ctccgtctggactgcatgctgaaaatcttccaacggataagtgatggaaaatccatgaag
cttgatgagactgagtggttgggcctttcgatgtacacatga
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