Kryptolebias marmoratus (mangrove rivulus): 108248917
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Entry
108248917 CDS
T05608
Symbol
xpo1b
Name
(RefSeq) exportin-1 isoform X1
KO
K14290
exportin-1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03008
Ribosome biogenesis in eukaryotes
kmr03013
Nucleocytoplasmic transport
kmr03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108248917 (xpo1b)
03008 Ribosome biogenesis in eukaryotes
108248917 (xpo1b)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
108248917 (xpo1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kmr03019
]
108248917 (xpo1b)
03009 Ribosome biogenesis [BR:
kmr03009
]
108248917 (xpo1b)
03016 Transfer RNA biogenesis [BR:
kmr03016
]
108248917 (xpo1b)
03036 Chromosome and associated proteins [BR:
kmr03036
]
108248917 (xpo1b)
Messenger RNA biogenesis [BR:
kmr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
108248917 (xpo1b)
Ribosome biogenesis [BR:
kmr03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
108248917 (xpo1b)
Pre-60S particles
108248917 (xpo1b)
Transfer RNA biogenesis [BR:
kmr03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
108248917 (xpo1b)
Chromosome and associated proteins [BR:
kmr03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
108248917 (xpo1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
DUF3385
Hydrolase_3
Rap1a
BspA_v
Motif
Other DBs
NCBI-GeneID:
108248917
NCBI-ProteinID:
XP_017293459
UniProt:
A0A3Q3GDR7
LinkDB
All DBs
Position
LG22:29718751..29746475
Genome browser
AA seq
1071 aa
AA seq
DB search
MPAVMTMLADHTAQQLLDFNQKLDINLLDNVVNCLYHGVGPQQRMAQEVLTHLKEHPDAW
TRVDTILEFSQNMNTKYYALQILETVIKTRWKILPRDQCEGIKKYVVGLIIKTSSDSTNV
EKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMVILKLLSEEVFD
FSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVYATLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVSQYEEQFVTLFTLTMCQLKQMLPL
NTNIRLAYANGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRLNLRETSMEALHYMLLVSEV
EETEIFKICLEYWNYLAAELYRESPFSTSTSPLLSGNQHFDVPPRRQLYLPVLSKVRLLM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKL
HNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFI
QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQAVQEHLIEKYMLL
PNQVWDSIIQQATKNVDILKDPETVKQLGSILKTNVRACKAVGHPFVIQLGRIYLDMLNV
YKCLSENISAAIQTNGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVGENFVPPL
LDAVLIDYQRNVPAAREPEVLSTMATIVNKLGGHITSEIPQIFDAVFECTLNMINKNFEE
FPEHRTHFFYLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILYTL
LQNVAQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKITA
SLNPASPANNQVFIQEYVANLLKTAFPHLQDAQVKVFVTGLFSLNQDIAAFKEHLRDFLV
QIKEFAGEDTSDLFLEERESALRQAQEEKHKIQMSVPGILNPHEIPEEMCD
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgccagcagtaatgacaatgttagcagatcatactgcacagcagctgctggacttcaac
cagaaattagatatcaacctgttggataatgtggtgaactgtctgtaccatggggtggga
cctcagcaaagaatggctcaggaggtgttaacacacctgaaagagcacccagatgcatgg
acaagggtggacaccatcctggagttctctcaaaacatgaacaccaaatactacgctctc
cagatattggaaacagttatcaaaaccagatggaagatccttcccagggatcagtgtgaa
ggtattaaaaagtatgttgttggactcattatcaagacttcatcagattctacaaatgtg
gagaaagaaaaagtgtacattggaaagttgaacatgatccttgttcagatcctgaagcag
gagtggcccaagcactggcccacattcatcagcgacattgtcggagcgagtcgaaccagc
gagagcctttgtcagaacaacatggtcattttaaaactgcttagtgaggaggtctttgat
ttctccagtggccagatgacccaggtcaaagcgaagcacctgaaagacagcatgtgcaat
gaattttcacagatattccagctgtgtcagtttgtgatggaaaattctcagaatgcccct
ttggtttacgccaccttggagacccttctacgttttctgaactggatcccactggggtat
atttttgaaaccaagctcatcagcaccttggtgtataagttcttgaatgtaccgatgttt
cgaaacgtgacgctgaagtgcctgacggagattgctggagtgagtgtgagccagtatgaa
gagcagtttgtgaccctcttcacgctgactatgtgtcagcttaaacagatgctgcctctg
aacaccaacattcgtctggcctatgccaacgggaaagatgacgaacagaacttcattcag
aacctaagtctgttcctctgtactttccttaaagagcatgggcagcttatcgagaagcgc
ctcaacctcagagagacatcaatggaggccctccactacatgctcctggtgtcagaggtc
gaagagactgagatcttcaaaatttgtctggagtattggaactacttggctgctgaactc
tacagagaaagtccattttccacatcgacgtcccctctgctttctgggaaccagcacttt
gatgttccaccacgtagacagctgtatcttcctgttctctccaaggtgcgtctgctcatg
gttagtcgaatggccaaaccagaggaagtcctggtggtggaaaatgaccagggggaagtt
gtcagagagttcatgaaggacacagattccatcaatctttacaagaacatgagagaaacc
ctcgtgtatctgactcatttggactatgcagacacagaacgcataatgacagagaagctt
cacaaccaggtcaatggtaccgagtggtcctggaaaaatctcaatacattgtgctgggct
attggatctatcagtggggcgatgcatgaggaggatgagaagaggtttcttgttactgtc
attaaggatttgctgggtctgtgtgaacagaaacgaggaaaggacaacaaggccatcatt
gcctcaaacatcatgtacatcgttggccagtatccacgttttctccgcgctcactggaag
ttcctcaaaactgttgtcaacaaactctttgaattcatgcacgagactcatgatggagtt
caggacatggcttgtgacaccttcattaagatagcccagaagtgcagacgtcactttatc
caggtgcaggttggggaagtgatgcctttcatcgatgagatattgaacaacatcaacaca
atcatctgtgacctccagcctcagcaggtgcacacgttctatgaggcagtgggttatatg
atcggggcccagacagaccaggctgtccaggagcacctaatagaaaaatatatgctgctc
cctaatcaagtgtgggacagcatcatccagcaggccaccaagaacgttgacatcttgaag
gacccagaaactgtaaaacaactcggcagcatcttaaaaactaacgtcagagcctgcaaa
gctgtgggacacccttttgttatccagttgggacggatttacctggacatgctcaatgtc
tataagtgcctcagcgagaacatttctgctgctattcaaacaaacggtgagatggtgaca
aaacagcctctgatccggagtatgagaacagtgaaacgagaaactctgaagctgatctcc
ggctgggtcagtcgatcaaatgacccgcagatggtcggagagaactttgttcctcctctg
ttggatgctgtcctcatagattaccagcgtaatgttcctgcagcccgtgagcctgaggtc
ctcagcactatggcaacaatagtcaacaagctggggggtcacatcaccagcgagatccct
cagatctttgacgctgtctttgagtgcacactgaacatgattaacaagaactttgaggag
tttccggagcacaggacccacttcttctacttactgcaagctgtaaactctcactgcttt
cctgcattcctcgccatccccccagcccagtttaaactggttctggactccatcatctgg
gccttcaaacacaccatgaggaatgtggcggacactggtctgcagattttatacacgctg
ctgcagaatgttgcccaggaggaagcagcggctcagagcttctaccagacgtatttctgt
gatatcctgcagcacatcttctctgtggtcactgacacgtcacatactgctggcctcact
atgcatgcatccatcttggcctacatgttcaaccttgtagaagaaggaaaaatcacagca
tctttaaaccctgccagccctgccaacaaccaggtgttcatccaggaatacgtcgccaat
ttactgaagactgcctttccccacttacaagatgctcaggtaaaggtgtttgtgacgggg
ctcttcagtttaaaccaggacattgctgccttcaaggagcacctgagggacttcctggtg
caaattaaggagtttgcaggtgaggacacatcagatctgttcttggaggagagggagtca
gccctccgccaggcacaagaggaaaaacacaagatccagatgtcagtgccaggcatcctg
aaccctcatgagatcccagaggaaatgtgtgactga
DBGET
integrated database retrieval system
