Kluyveromyces marxianus: KLMA_40477
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Entry
KLMA_40477 CDS
T05269
Symbol
SKI3
Name
(RefSeq) superkiller protein 3
KO
K12600
superkiller protein 3
Organism
kmx
Kluyveromyces marxianus
Pathway
kmx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kmx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KLMA_40477 (SKI3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kmx03019
]
KLMA_40477 (SKI3)
Messenger RNA biogenesis [BR:
kmx03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
KLMA_40477 (SKI3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_16
TPR_22
TPR_2
TPR_14
TPR_8
TPR_1
TPR_17
TPR_CcmH_CycH
TPR_11
TPR_7
TPR_9
TPR_12
ANAPC3
Alkyl_sulf_dimr
HrpB1_HrpK
ARM_TT21_C
PknG_TPR
TPR-S
Motif
Other DBs
NCBI-GeneID:
34716463
NCBI-ProteinID:
XP_022676322
UniProt:
W0TCG9
LinkDB
All DBs
Position
4:1078396..1082598
Genome browser
AA seq
1400 aa
AA seq
DB search
MSQVKSLLKNARAALAEADWEYAIESSKDVLKIDKENYFAYVFLGKANEGLENFKKSKES
YLKAISLDSTNPVAWKGLFVLFKTVKNLKDIVEWKEYFKYCNDYAQALAQQQQSLIDLIN
DIRNVRRKYPDAEEPFLESIRPGTEFGELVGREIMTPRDVLRKLLTLKQNSEQQRASKLI
SAARMKISVNDPDYHFKVNSSAWTVYKDSDVDLLFRQLVNITEDDEKRRNLELQWLEYRI
KLLKTMPKEMKPSFYPVVKEMIDDMIVVKHDSLLPWTLYFDWQDYLNVESLDVTVCSEFI
KKFPSEPLAMVIYAWISSSLSSYDSKKLSTDVLNSSSPASDPTVNEEDVETESEGISPIV
DIEEEASSGLSEATVLEMLQDNIVKCKQSILANRIIAHYYVTQKEFQLALPYIRAGTSAV
ATSIRDLGASLKNSKFDFTLLYATTYTYFEAPKNHNIALSLFDKVLLEDPKNAEAKMGKG
LIFIEMKNWEGASQYLADATAEFPQNWEIISAYGWCLLHVGETQKAIEKFNAVLENTPSS
DPKSIDFRALNYWRIAKCYLYEAENNSDKDLINKAYKTLVHALKVSDIYAPAYSLLGYIY
QKYYSDESRAFKCFFKALSLDSSDLEAAYYICEKYCAKGNWASAASVAERLIKTEHIKNA
LQSINWPYRVLGMSHLERQQYAESIEYFQSAIRISASDVESWVGLGQAYLNCGRVEASIK
VFQKVIKMKADHKFAQYLLANALASLGEYEKSLELFEKLVMEGQPEECFLVSEISVLVDY
AVELYHQGYLLKAVDTAVKSIKKIEIVLCSVSSELYTVWTSLSKALRIFVTIESQIDKLP
VDTLVNIFNQIALIEEDTVFEIDNVSLDTILSDDTADNMSIALKFVILSAKYPILAKNFQ
DSSRTLKASLLYNLGCAELLCYMTINGQNYCDAAIKAFKDAISYQSNNAEAWIGMGIATM
DKNYKVSQHCFIKAIVTSPKEIAGWHCLALLALKNNDTEMTHSILLKAQSIAPQDWYSWL
GLALMYEKEGKANDSARMFTHAYVLANGKSKITQLLYAKNVLSRRLGKGDNEKDILAQQE
LSSVAAGLSQYLKKSQNDIFAMQLYILTLERLHEYTTASGLAQYLSTLVEERFEKSQDER
ELLNFALIKTQLSRLYMGNEDYDNAIEAATFALGILEDDENQTDIVKTAIVSNHVTIGLS
SFFISDIDQSLDHSNTLISLSPASSSVAILIFKILYAMQSEEASDIALQELMNYIDKNGN
DYNVTLTLTAFFILKDRPDELRELAKQLKMLPNSLLLKDQHKDIPFLIQEINKRIGEERD
TVDIWQKASFMFPNNPNVWDRLSTEISCRISASGQNRVSPLHLSNKLAKRGTLTKAQKAM
YLCPWNAQAVNALKECFKAI
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaagttaaatctcttttgaaaaatgctagggcagcattggcggaagcagattgg
gaatatgcaattgaaagttccaaggacgtcctaaaaattgataaagaaaactactttgcc
tatgttttcttaggtaaggccaacgagggattagagaacttcaaaaaatctaaagagagt
tatttgaaagctatttcgctagatagtactaatcctgttgcatggaaaggtcttttcgtt
ttattcaaaacagtaaagaatttaaaagacatagtagagtggaaggagtactttaaatat
tgcaacgactatgcccaagcgctagcacaacagcaacagtcattgattgacttaataaat
gatattagaaacgtcagaaggaaatatccagatgcagaagaaccatttttggagagcatt
cgaccaggaactgaattcggagaattagttggtagagaaataatgaccccccgcgacgtg
cttaggaaattgttgacattgaagcaaaattccgaacagcaacgtgcgtcaaaactaatc
agcgcagcgcgaatgaagattagtgttaacgacccagattatcatttcaaggttaactct
tcagcgtggactgtgtacaaagattcagacgtggacctattgtttagacagttggtgaat
atcactgaagatgacgagaagagaaggaatctcgaactccaatggttggaataccgtatt
aaacttctaaaaactatgccgaaggaaatgaaaccatcgttttaccctgtggttaaggaa
atgatagatgatatgattgtagtaaagcacgactcacttctcccttggacattatatttc
gactggcaggactatttaaatgtggagtctttagatgtcactgtttgttcagaatttatt
aaaaagttcccatcagagcccttggctatggtgatttatgcatggattagttcaagcctc
tcgagctacgattctaaaaaattaagtacagatgtgttaaattcatcatcacctgcaagt
gatccaacagtgaacgaagaagatgtggagactgaatctgaaggtatatcgccaatagtg
gatatcgaagaagaagcttcaagcgggttatccgaagccactgtactagaaatgttacaa
gacaatattgttaaatgcaagcaaagcatccttgcgaatagaataattgcacactactat
gttactcagaaagaatttcaactcgctcttccatatattagagcaggtacatccgcagtt
gcaacttcaataagagatttaggtgcctctctaaaaaactccaaatttgatttcacatta
ttgtatgcaacaacgtacacatattttgaggctccaaagaatcacaacatagctctatcg
ctattcgataaggtacttctagaggatccgaagaatgcagaggcaaaaatgggtaaaggt
ttgattttcattgaaatgaaaaattgggaaggagcatcccaatatcttgcagatgcgacc
gcagagtttcctcaaaattgggaaattatttctgcttacggttggtgtttgttacacgtt
ggagagacacagaaagccatcgaaaagtttaatgcagttttagagaatacaccaagtagt
gatcccaaatctattgactttagggctctaaactattggagaatagcaaagtgttactta
tatgaagctgagaacaattctgataaagatttgataaacaaagcttacaagacattggta
catgcattaaaagtttctgatatatatgctcctgcttattctcttttgggttacatatat
cagaaatactactcagatgaaagcagagcgttcaagtgttttttcaaagctctctcttta
gattctagcgaccttgaagctgcatattatatatgtgaaaaatattgtgcaaaaggtaat
tgggcatcagcggcgtcagttgcggaacgtttgatcaaaacagaacatataaagaatgct
ttacaatccattaactggccttatagagttttgggaatgagccacttagagagacaacag
tatgctgaatctattgagtatttccaatctgctataagaatttcggcctctgatgttgaa
tcatgggtgggattaggtcaagcatatttgaattgtggtagagtggaagcttctattaaa
gtattccagaaagttataaaaatgaaagccgaccataaatttgctcaatatcttcttgca
aatgccttggcttctctaggagaatatgagaagagtttagagctctttgaaaaactagtc
atggaagggcaacctgaagaatgtttcttggtctcagaaatttccgtacttgttgattat
gccgtggagctctaccaccaaggctatcttttgaaagcagtggacactgctgttaaaagc
ataaagaaaatcgaaatcgtactgtgctccgtttcttccgaattatatactgtttggact
tctctctcaaaggctttgagaattttcgttactattgaatctcagattgataaattaccc
gttgatacattggtgaacattttcaaccaaatagctctaatagaagaagatacggtgttc
gaaatagacaatgtgtcacttgatactattctatctgatgatactgcagacaacatgtcc
atcgcattaaagtttgtcattctgtcagctaaataccccatattggctaaaaacttccaa
gattcttctcggactttgaaggcttctttgttgtataatcttggatgtgctgaactcctg
tgctacatgactataaatggacaaaattactgtgatgctgcaattaaagccttcaaggat
gccatcagttaccaatctaacaacgcagaggcatggataggtatgggtatagctactatg
gataaaaactataaagtatcgcaacattgcttcattaaagcaattgttacgagcccaaaa
gaaattgctggttggcactgtctcgccttactagctttaaagaataatgatacggagatg
acacactctatcctcttaaaagctcagagtattgctcctcaagattggtattcgtggcta
gggttggcgttaatgtatgaaaaagaaggaaaagcaaatgatagtgcaaggatgtttact
cacgcttatgtcttggccaatggtaagtcaaagattacgcagttgctctatgcaaagaat
gttttgagcaggcgtttaggtaaaggtgataatgaaaaggatattcttgctcaacaagag
ctttcttcagttgcagcaggattaagtcaatatttgaaaaaatctcaaaatgatatattt
gcaatgcaattatatatattgacacttgaaaggttacatgaatacactacggcatcgggt
ttggcacaatatttgtcaactttagtggaagaaagatttgaaaaatcccaggacgaacgt
gagcttttgaattttgctctgatcaagactcagctttctagattgtacatgggaaatgaa
gactacgacaacgctattgaagctgccacctttgctttaggaatccttgaagatgatgaa
aatcagacagatattgtaaagacggctatagtctcaaatcatgttacgatcggtctctca
tcatttttcatttcagatattgatcaatctttagatcattctaacactttaatttctttg
tcacctgcttcaagtagtgttgcgattttaattttcaaaatattgtacgctatgcaatcg
gaagaagcctctgatattgccctccaagaattaatgaattatattgataagaacggtaat
gattataacgtaacattaactctcacagcattctttattttgaaggatcgtcccgatgaa
ttaagagaacttgccaaacaattaaagatgcttccaaattcattgttgttgaaagatcaa
cataaagacattcctttcttaatccaagaaattaacaaacgaattggtgaagagagagat
actgttgacatctggcaaaaggcaagtttcatgtttcctaataacccgaatgtttgggat
agattgtcaactgaaatctcgtgtagaatatctgcatcgggccagaatagagtttcacct
cttcacttaagcaataagcttgcaaagaggggtacactaacaaaggcgcaaaaggcgatg
tacttatgtccatggaacgcacaggctgtcaatgctttgaaagaatgctttaaagctata
tag
DBGET
integrated database retrieval system
