Komagataeibacter nataicola: B0W47_05090
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Entry
B0W47_05090 CDS
T04737
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
kna
Komagataeibacter nataicola
Pathway
kna03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
kna00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
B0W47_05090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kna03021
]
B0W47_05090
03400 DNA repair and recombination proteins [BR:
kna03400
]
B0W47_05090
Enzymes [BR:
kna01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
B0W47_05090
Transcription machinery [BR:
kna03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
B0W47_05090
DNA repair and recombination proteins [BR:
kna03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
B0W47_05090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Biotin_lipoyl_2
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
AQU86957
UniProt:
A0A9N7H0N7
LinkDB
All DBs
Position
complement(1034148..1038341)
Genome browser
AA seq
1397 aa
AA seq
DB search
MNELMKILGQGGQAMTFDQIKIQLASAEQIRSWSYGEIKKPETINYRTFKPERDGLFCAR
IFGPIKDYECLCGKYKRMKFRGIICEKCGVEVTLAKVRRERMGHIELASPVAHIWFLKSL
PSRIGLMVDMTLKDLEKILYFESYVVLEPGTSPLKQYSLLTEDQYLDVMDEHGDEGIEVG
IGAEAIKKILERIDCKVEKEELRLELKETTSEAKRKKLVKRLKLVEAFADSESRPEWMIL
DLVPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPDIIVRNEKRML
QESVDALFDNGRRGRAITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGP
ELKLHQCGLPKKMALELFKPFIYSKLEKYGHATTIKAAKRMVEKERPEVWDILEEVIREH
PVMLNRAPTLHRLGIQAFEPVLIEDKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQLE
ARVLMMSTNNILSPANGKPIIVPSQDIVLGLYYLSLETPEFRATPDKNSYDDKGQVTVTG
APSFSSVGEVEYALSTGAVKLHDKIRARIESFDAEGKSVRETVVTTPGRMLVAQILPRNQ
ALPFSLINRQLTKKIVSDVIDAVYRHCGQKECVIFCDRLMGLGFRHAARSGISFGKDDMI
VPVEKKELVDRTAAEVKEFEQQYQDGLITAGERYNKVVDAWSRCTDEVQAAMMKEISKQE
IGKPTNSVWMMSHSGARGSPAQMKQLAGMRGLMAKPSGEIIEQPIIANFKEGLSVLDYFT
SSHGARKGLADTALKTANSGYLTRRLVDVAQDSIIVEEDCGTERGLTVRAVMDGGEVVAS
LSERMLGRTLAADVLDPATGKVLFPRNTLIEEAEAEQIEKAGVESLLIRSVLTCDSRVGV
CGHCYGRDLARGTPVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQRGAEQSMVEASR
DGKVTIRNKNVVHNSQNVPIVMSRNCEILLTDDRGTERARYRVPYGARLLVEDGAEVARG
QKMAEWDPYTLPIITEQPGKVEYLDLIDSITLVERMDEVTGLTSKVVVDYKQASKGIDLR
PRLQLKDANGDVVKLANGNDARYFLSPDSLLSVENGAQVNAGDVLSRIPREGSKTRDITG
GLPRVAELFEARRPKDHAIISETEGRVEFGKDYKSKRRVIVKNDETGEETDYLIPKGKHV
SVQEGDFVQVGDPLVDGPRVPHDILKVLGVEALSDYLVNEIQDVYRLQGVKINDKHIEVI
VRQMLQKVEILEPGDTTYLIGETVDRIEYEEENAKRLNLGEHPAVAMPVLQGITKASLQT
QSFISAASFQETTRVLTEAATAGKKDTLNGLKENVIVGRLIPAGTGSVMNKLRAVAAGED
KQRLAKARAAVPPKAAE
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaactcatgaagatccttggtcagggcggccaggccatgacctttgaccagatc
aagatccagctggcctcggccgagcagatccgttcgtggtcctatggcgagatcaagaag
cccgagaccatcaactaccggaccttcaagccggagcgtgatggcctgttctgcgcgcgg
atttttggtccgatcaaggactacgaatgcttgtgcggcaagtacaagcggatgaaattc
cgcggcatcatctgcgaaaagtgtggcgttgaagttacgctggccaaggtgcgccgcgag
cgcatgggccatatcgagctggccagcccggttgcacatatctggttcctgaaatccctg
cccagccgtatcggcctgatggtcgacatgacgctgaaggatcttgaaaagatcctgtat
ttcgagagctatgtcgtgctcgagcccggcacctcgccgctcaagcagtacagcctgctg
acggaagaccagtatctcgatgtcatggacgagcatggcgacgagggcatcgaggtcggc
attggcgcggaagcgatcaagaagatcctcgagcgcatcgactgcaaggtcgagaaggaa
gaactgcgtcttgagctgaaggaaaccacatccgaagccaagcgcaagaagctggtcaag
cgcctgaagctcgtcgaggcctttgccgatagtgaatcgcgcccggaatggatgatcctg
gacctcgtgccggtcattccgcccgagctgcgcccgctggtgccgcttgatggtggccgt
ttcgccacgtcagacctgaacgacctgtaccgtcgcgtcatcaaccgtaacaaccgcctc
aagcggctgatcgaactgcgcgcgcccgatatcatcgtgcgtaacgaaaagcgcatgctg
caggaatcggtcgatgcgctgttcgataacggtcgccgtggccgcgccatcaccggcgcc
aacaagcgtccgctcaagtcgctgtccgacatgctcaagggcaagcagggccgtttccgc
cagaacctgctcggcaagcgcgtcgactattcgggccgttcggtcatcgtggtggggccg
gagctgaagctgcaccagtgcggcctgcccaagaagatggcgctcgagctgttcaagccg
ttcatctactccaagctggaaaaatacggtcacgccaccaccatcaaggccgccaagcgg
atggtggaaaaggaacgtcccgaagtgtgggatatccttgaagaagtgatccgcgagcat
ccggtcatgctcaaccgtgcgcccacgctgcaccgtctgggcatccaggcgttcgagccg
gtgctgatcgaagacaaggccatccagcttcacccgctggtctgcaccgcgttcaacgcc
gacttcgatggcgatcagatggccgtgcacgtgccgctgagccttgaggcgcagcttgaa
gcccgcgtgctgatgatgtcgaccaacaacatcctcagcccggccaacggcaagcccatc
atcgtgccgtcgcaggatattgtgctggggctgtattacctcagcctcgagacgcccgaa
ttccgcgcgacgcccgacaagaacagctacgatgacaaggggcaggtgaccgtaaccggc
gcgccgtccttctccagcgttggcgaagtggaatacgcgctgagcacgggcgcggtgaag
ctgcacgacaagatccgcgcgcgtatcgagagcttcgatgccgagggcaagagcgtgcgt
gagaccgtcgtcaccacgccgggccgcatgcttgttgcccagatcctgccgcgcaaccag
gcgctgccgttctcgctgatcaaccgccagttgaccaagaagatcgtgtcggacgtgatc
gatgcggtttaccgtcactgcggccagaaggaatgcgtgatcttctgtgaccgcctgatg
ggccttggtttccgccacgccgcgcgttcgggcatttccttcggcaaggacgacatgatc
gttcccgtcgagaagaaggaactcgtggaccgtacggccgccgaggtgaaggagttcgag
cagcagtatcaggacggtctgatcaccgctggcgagcgctacaacaaggtggtcgatgcc
tggtcgcgctgcaccgatgaagtgcaggccgcgatgatgaaggagatctccaagcaggag
atcggcaaacctaccaactcggtgtggatgatgagccactccggtgcccgtgggtcgccg
gcgcagatgaagcagctcgccggtatgcgcgggctgatggccaagccgtcgggtgagatc
atcgaacagccgatcatcgccaacttcaaggaaggcctgtcggttctcgattacttcacc
tccagccatggtgcgcgtaaaggcctggccgataccgcgctcaagaccgcgaactcgggt
tacctgacccgccgcctcgttgacgtggcgcaggacagcatcatcgttgaggaagattgc
ggcaccgagcgcggcctgaccgtgcgtgcggtcatggatggcggcgaagtcgtggcctcc
ctgtccgagcggatgctcggccgcacgctggccgccgacgtgctggacccggcaaccggc
aaggtgctcttcccgcgcaatacgctgatcgaggaagccgaggccgagcagatcgagaag
gcgggtgtcgaaagcctgctgatccgctccgtgctgacctgtgacagccgcgtgggcgtg
tgtgggcactgctatggccgtgaccttgcacgcgggacgccggtcaacatcggtgaggcc
gtgggcgttatcgccgcccagtccatcggtgagccgggcacgcagctgaccatgcgcacc
ttccatatcggtggcgcggcgcagcgtggcgcggagcagtcgatggtcgaggcctcgcgt
gatggcaaggtgacgatccgcaacaagaacgtggtgcacaacagtcagaacgtgcccatc
gtcatgtcgcgtaactgcgagatcctgctgacggatgaccgcggaaccgaacgcgcccgt
taccgcgtgccctatggtgcgcgcctgctggtcgaggatggcgccgaggtggcccgtggc
cagaagatggccgagtgggatccgtacaccctgccgatcatcaccgagcagcctggcaag
gtggaatatctcgacctgatcgactccatcaccctggtggagcggatggatgaggtgacc
ggcctgacctcgaaagtggtcgtggactacaagcaggcttccaaggggatcgacctgcgt
ccgcgcctgcagctcaaggatgccaacggcgatgtggtgaagctggccaacggcaacgac
gcccgctacttcctgtcgcctgactcgctgctctcggtcgagaacggcgcgcaggtcaac
gcaggtgacgtgctgtcgcgtatcccgcgtgaaggctccaagacgcgtgacattaccggt
ggtctgccgcgcgtggcggaactgttcgaggcccgtcggccgaaggatcacgccatcatc
tcggaaaccgaggggcgcgtggaattcggcaaggattacaagtccaagcgccgcgtcatc
gtcaagaacgacgagacgggcgaggagacggattacctcatccccaagggcaagcacgtg
tccgttcaggaaggcgactttgtccaggttggcgatccgctcgtcgacgggccgcgcgtg
ccgcatgacatcctgaaggttctgggtgtcgaggcgctgtcggactatctcgtcaacgag
atccaggacgtgtaccgactgcagggcgtgaagatcaatgacaagcacatcgaagtcatt
gttcgtcagatgctgcagaaggtggaaatccttgagccgggcgatacgacctacctgatc
ggtgagacggtggaccgtattgaatacgaggaagagaacgccaagcgcctgaacctcggt
gaacaccctgccgttgccatgccggtgctgcagggcatcaccaaggcctcgctgcagacg
cagtccttcatctctgcggcctccttccaggagaccacccgtgtcctcaccgaggccgct
acggcgggcaagaaggatacgctcaacggtctcaaggagaacgttatcgtcggccgcctg
atccccgcagggacgggcagcgtgatgaacaagctccgtgcggttgccgcaggcgaggac
aagcagcgcctcgccaaggcccgcgctgccgtgccgcccaaggcggccgagtaa
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integrated database retrieval system
