Kwoniella newhampshirensis: 92179956 Help Entry 92179956          CDS       T10314                                  Symbol IAR55_002698 Name (RefSeq) hypothetical protein   KO K12600   superkiller protein 3 Organism kne  Kwoniella newhampshirensis Pathway kne03018   RNA degradation Brite KEGG Orthology (KO) [BR:kne00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     92179956 (IAR55_002698)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:kne03019]     92179956 (IAR55_002698) Messenger RNA biogenesis [BR:kne03019]  Eukaryotic type   mRNA degradation factors    3'-5' decay     Ski complex      92179956 (IAR55_002698) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TPR_2 TPR_16 TPR_17 TPR_19 TPR_1 TPR_8 TPR_CcmH_CycH TPR_14 TPR_12 TPR_11 TPR_9 ANAPC3 TPR_7 TPR_6 HrpB1_HrpK DUF6584 Iml2-TPR_39 Motif Other DBs NCBI-GeneID:  92179956 NCBI-ProteinID:  XP_066803312 UniProt:  A0AAW0Z001 LinkDB All DBs Position 5:294513..299911 Genome browser AA seq 1556 aa AA seqDB search MATTKKALKSIKTHLENKESESALYEATNLLKSIDEKAPEVAQVLAFRGLALTQLERFDE AKRSYNHLYRLQPSHPLATVGLRKLYEKTQGWEELGAFLEVLVQAAYDDGDAESCASYMQ DLVELRVKHGPEERLYQALCLLLPSSPLVPLLQSLPPPSGAYTPITTPVYPPMSAGPLPT LPSPLPHVLHLLASLPLLLNLLIRSESLVHTTTEVKVKAGRTRLGAGPEKEVRRKVDGEV LGGEMGMQMVELLREVGNHPSVLDEVRREVEVREFNFWRKLVACLGRDDNLGQKSRKPPT SKQSSSASVHTEPSSFITPALFQSREYSKPSKEEALSRADGLANGFILLELSGKGAEEGW AWVLEGKDEPTLFYDLDLLHKYAKTFPESRMTDFIDDYCRWFKLPLPEPEDEAHVEESAD GQATVQPSKSAKKYRGRKGKAGQNARERRKARRAAGKDGLLAEDLDQEERDELVASMTKL VEQLPKSIFAHRVMARIAVQEEDWPNAITFAEKGRILAKDVEAERGISLPHVKASLDTVL GVALVPYFAPKHHTRATRLLTGVLKEFPDNNEARFARAQIYQSAGKWSEARKLFQMLLDA GGDERGVLAAKEELAWCLVNEGKLEAGRDVLEGVVETRDARKEKGGKDDEAYERARAWWR LGRTEWMIGDDESRQHAEDWFMASIRALPTFAPAYTALGICYSAATPPDEDRATKCFQKA FELDATEAEAARQLAFGYANEDEWALVRSIATRVMEGEGGLDGVAGGEVMNPKGRFAPQN AWAWKALGSTEVHYKNYAKAAQAYQIALRAEPDDVSTWVMLGESYVNCGRHVAGLKALQH ALELDPSNWRARFDIGQAQGQLGVFDKAIEVYEQVMYMTGGTEIGVIAALAEAMLSLGRQ SGVGGFRERSCNAFHSAVKLAMEVLHTGRSHRPWAWKVIGDATFELSTQESSLEEAESTC EALQPVLQHLVEDDTDRRSQVEGLGHAANLLQTAADLEYTLKTSIFAFAYRAHLLKNEPR VADPALYDLATALHSLALRLDDAEKKKACLKAAISAIRLALERDAGDERLWNALGVICGT AGPQIAQHALVVSLELYGKDPVVWNNLGYLYLRFGDSDLANQCFLKAQIIDPDYARAWFG QGLLAEKNGDKDTAKALLAHAVTLSAGSLLEADLALAVATFERFLSPGDHIPTTLLHQPA FALRHYCHQRPCDFAAAHLYALICERLGLVDEAASSLERAAVVLEEEFEHSESTEIEVRY ATALCNLGRVQLAAGKYQQSLDGLINCWELLSASTDGSMTSLKVQCRLLQGLAHYWLGQV DESLEAFQASLDEATASQDSRVKEEVAVLLSRTLWGLGGDDAKETAKTNLMECLSQEKPS LKVISTLAAIALVSSDEDLVDAALSELLSRSLENRIKEDPSGQSDLVLYCHAVSEGRPDD AHTVLERGVRANPISSTARNRLAEALIKDGKANEAISVLSATDGMRNGEDDVGIVSRMEI LRGAAEILDGEEAGVGRVQRSVMLAPWAQEGWEAMAWGRKIVADAEDEAKASDDAT NT seq 4671 nt NT seq  +upstreamnt  +downstreamnt atggcgaccaccaaaaaagcattgaagtcaatcaaaacacatctagagaacaaggagtcc gagtcagcattgtatgaagctacaaacttgctaaaatcgatagatgagaaagccccagag gtcgcacaggtcttggcttttcgaggcttagctctaactcagctagagcggttcgatgag gccaagaggtcatacaaccacctgtatcgcctacaacctagtcatccactggctactgtg gggctaagaaagctgtatgagaagacacaagggtgggaagagctgggggcgttcttggaa gtgcttgtccaagcagcatatgacgatggtgatgccgaaagttgtgcatcatacatgcaa gatctcgtagagctgcgtgtcaagcatggaccggaggagagactgtatcaagcactgtgt ctactcctcccatcatccccacttgtacccctgctacagtctctaccccctcctagtggt gcttatacacctatcacaacacctgtttatcccccgatgtcggctggtccattacctacg ctaccgtcaccacttcctcacgtcctacacctgttagcttccctgcccctgctgttaaat ttgttgataagatccgagtcactcgtacacacgaccaccgaggtcaaagtgaaagctggg aggacaagacttggtgcgggccccgagaaagaagtcagacgcaaagtcgatggggaagtc ctcggtggagagatgggcatgcaaatggtagagcttctcagggaggtaggcaatcaccca agcgtattggacgaagttcgaagagaagtagaagtgcgggaattcaacttttggagaaag cttgtggcttgtctcggacgtgatgacaacctgggtcagaaaagtcggaagccgcctacc agcaaacagagttcatccgcatccgtacatacagaaccctccagttttattacaccggca ctatttcagtctcgcgaatattcgaagccctcgaaagaggaagctctatctcgcgcagat ggcttggcaaacggcttcattcttcttgagctctccggcaaaggcgcagaagaaggatgg gcttgggttttggagggcaaagacgagccaacgcttttctacgatctcgacctcctgcac aagtacgcgaaaacattccccgaatcccgaatgacagattttatcgacgattattgccgg tggttcaagttaccactcccggaaccggaggacgaagcccacgtcgaagagtccgccgat ggacaggcaacagtccagccttcgaagtccgctaagaagtatcggggccgaaaaggaaag gcggggcagaacgctcgagaacgtcgaaaggccagacgagcggctggcaaggacggtcta ctagctgaagatctagaccaggaggagcgagatgagttggtcgcgtccatgaccaaattg gtcgagcaactcccaaaatccatcttcgcacatcgagtcatggctcggatagctgttcag gaggaggattggccaaatgcaataactttcgccgagaaaggtcgcatattggcgaaagac gtcgaagccgagagaggtatctcattgccacatgtgaaggcctcgttagacaccgtcctt ggtgtggctctggtaccatatttcgcaccgaaacaccacactcgtgcaactcgtctgctc accggcgtcctcaaggagttccctgataacaacgaggctcgctttgcgcgagcacagata tatcaatccgctggcaaatggtccgaagccagaaagctcttccagatgcttcttgatgcc ggtggagatgagagaggtgttctcgctgccaaagaggagcttgcatggtgtcttgtgaac gagggaaagctggaggcagggcgagatgtactagagggagtcgtagagacaagagacgca cgaaaggaaaagggaggtaaagacgacgaagcctacgagcgtgcacgagcttggtggcgc cttgggaggacggagtggatgattggagacgatgaaagtcgacaacacgcggaagactgg tttatggcatcgattcgagctcttcccacctttgctcctgcctataccgctttgggaatt tgttactcggctgccactccaccggacgaagatcgagcaaccaagtgtttccaaaaggct tttgagcttgatgctaccgaggctgaggccgctagacaattggctttcggatatgccaat gaagacgaatgggctttggttcgctcaatagctaccagagtcatggaaggcgaaggcggt ttagatggcgtcgctggtggggaggttatgaaccccaagggacgcttcgcgcctcagaac gcatgggcttggaaggctttaggatctaccgaggtccattacaagaactacgccaaggca gctcaagcttatcagatcgctctacgtgctgaaccagacgatgtgtcgacttgggtcatg ctaggagaatcatatgtgaactgcggccgccatgttgcaggcttgaaagcccttcaacat gctctggagctggatccttcaaattggcgagcgaggttcgacattggtcaggcacagggt caactcggcgtgttcgacaaagcgattgaagtgtacgagcaagtaatgtacatgacaggt gggacagaaatcggtgtgatcgccgccctggcggaagccatgctttccctaggtagacag agcggcgtcggaggtttcagggagaggtcatgcaacgctttccacagtgcagtcaagcta gcaatggaagtcctgcataccggtcgaagtcatcgaccctgggcctggaaggtcattggc gatgcgactttcgagctcagtacacaagaatcttctctcgaggaagctgaatcgacatgc gaggcacttcaacccgtcttgcagcatcttgtggaagacgatactgatcgacgatctcaa gtcgagggtcttggccacgccgccaatctattgcagaccgcagcagaccttgagtataca ctgaaaacttccatcttcgccttcgcttatcgagctcatctcctcaagaacgagccacga gtggctgatccggcgttatatgacttggcgacagctttgcattccctcgcattgcggctg gacgacgccgagaaaaagaaagcttgcttgaaagcagccatctcggcgatccgactggcc ttggagagagatgcgggagatgagaggttatggaatgctcttggtgtgatctgtgggaca gctggaccccaaatagctcagcatgccttggtagtctcccttgagctgtatggcaaggac cccgtcgtctggaacaacttgggttacctttatctccggttcggtgacagcgatctcgcc aaccagtgtttcctcaaggcgcagataatcgacccagactacgcgcgagcatggttcggg caaggtctgctggcggaaaagaacggggacaaggatactgcaaaggcattgttagcccat gcagtcactctctccgcgggttctttgctggaagctgacttggcacttgctgtggccact ttcgagcgcttcctctctccaggcgatcatatcccaactacactgcttcatcaaccagcg ttcgctttgcgacactactgtcaccagcgcccttgcgactttgccgctgctcatttgtac gctctaatctgcgagcgactcggcctagttgacgaagcggcttcctcgctggagcgtgca gctgtcgttttggaggaggagtttgaacacagcgaatcgaccgagatcgaagtacgctat gctactgcactctgcaatctgggtagagtgcagcttgcagctgggaagtatcaacaaagc cttgatggactcatcaactgctgggaacttctctccgcttcaacggacgggtctatgacg tcgctgaaagtccagtgtagactgctgcaagggttggcgcattattggctcgggcaagtg gacgagtccctggaggccttccaggctagcttggacgaagcgactgcttctcaggactca agggttaaggaggaggtagccgtgttactcagtaggactttatggggtctaggaggggat gacgccaaggaaacagccaagaccaatctgatggagtgcttgtcccaggagaagccgtct ctcaaggtcatctctactcttgccgccatcgcactcgtctcatccgacgaggacctcgtc gacgctgccctttctgaacttctgtctcgttctttggaaaatagaatcaaagaagaccca tcgggccagtcagatctcgtcttgtactgtcatgcggtgtccgaaggtcgacccgatgac gcacacactgtcctcgaaagaggggtacgggccaaccctattagctcaacagcgaggaac agattggcagaagcactgatcaaagatgggaaagcaaacgaagcgatcagcgtcttgtca gcgacggacggcatgaggaacggagaagacgatgttgggatagtgtcgaggatggagata ctgagaggagctgcagagatactggatggagaggaagcaggcgtaggaagagtccagagg agtgtcatgttggctccgtgggctcaggaagggtgggaggcgatggcttgggggcggaag attgtggcggatgcggaggatgaggcgaaagcaagtgatgacgctacttga

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