Huiozyma naganishii: KNAG_0F04010
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Entry
KNAG_0F04010 CDS
T08174
Symbol
KNAG0F04010
Name
(RefSeq) hypothetical protein
KO
K12600
superkiller protein 3
Organism
kng
Huiozyma naganishii
Pathway
kng03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kng00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KNAG_0F04010 (KNAG0F04010)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kng03019
]
KNAG_0F04010 (KNAG0F04010)
Messenger RNA biogenesis [BR:
kng03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
KNAG_0F04010 (KNAG0F04010)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_22
TPR_CcmH_CycH
TPR_2
TPR_11
TPR_14
TPR_1
TPR_8
TPR_17
TPR_16
TPR_9
ANAPC3
ARM_TT21_C
HrpB1_HrpK
DUF2560
Motif
Other DBs
NCBI-GeneID:
34526780
NCBI-ProteinID:
XP_022465311
UniProt:
J7R880
LinkDB
All DBs
Position
6:757749..762005
Genome browser
AA seq
1418 aa
AA seq
DB search
MSELRQLLKDAKLELSRGDYEEAIALSKAVLEIDKDNYFAFVFLGKAYSSIEGKGRESVE
SYTRATQIDAANLLAWKGFFLTLEEHSKRLFPGMLTCSKFFGLCVQYMKLLIEQEQSQVQ
LINFVKIVKSHYADDINFILPFLEYFLPGTEPFEILGRHLLLPKESLAQLIRLTSLRESQ
EISRVTTEHRLKLSTQDPLYQSKINSFAWEIYQNSKLDKYYNQLINVVNDDQERASLETQ
WLEYRLKLLKSMPAEKKQEFFPRVKDMVDGMVVVKHDSLMAWKLYFDWEDFVDLNSLDAN
LVWEFFQKFPKEPLAMILYLWLNSNLSCYDTSKLSENNKQNSSPAKEADKGQDQTEVEAL
QEEDDQQEEELGEMLNAQENETSDVFSEEAILVALMDNISKVKNSTLAYRIVSQYYILNK
EYEMSLPYIKSGISLVSVNVRDLGANLINTKRELTIALATGYTYVDAPKNHKFALSLFDK
ILESDPENIQVKLGKAIISIESADWEDAGKLLTDVIAESPDNLEVQSQLAWCKAHLNAFD
NAILMLQNVIKNIEGTDQRTMQFRCENMWREAKVHIMKHRFGDQGENMDLINTAFKILIS
IIKLDSETFAKSYSTLGDIYAYYYRDDVRAYKCYYKSFEMDFTDIRAAKYICEIYTAAGN
WNAAAQICERLVKTEAIKMELRSTNWPYRVIGIAYLERQQESESVEWFHSALRVDPNDVE
SWVALGQAYFACGRVEASTKVFEKAIEIDPLHLYAQYFNSLSLAEMGCFEECIEILKNIT
QLNPEELAFQVSYSSILVSYAFDLYQQGFLMKGTASAIQAIELLRHISVDFRHSGQDIWL
SLSKAIYLFILVESQIETLPLESILEIFGSVESSKITDVDSIDGILYDNILQDSSSDNIA
IACKFLVLASKFALVTVDIESVSATVRSSIWCNIGLSELAAYMSLKEDGLRDAAIYSFKK
CIKYQTNTFQAWVGLGIATMDVNFRVSQHCLIKAASFAPKDIRTWFNLAILGLKKNDIDF
AHEVLTRTQSLSPESTDPWLGIGLIMEQIGKRTESHNVIAHAYSLSKGQSKNVQYFYANS
VVQRRVGSGNDEGDIDAMEELNATALGLEQYFKKKPNHAQAIDLAIMILERLQNYKVADT
FAAKLTGIFEQKFEESQDEDDIVNYAIIKAQLARIQLGLGEYNKAIESANLSDGIIGDST
AENCKSSQLSNAVCLGLANFFLGNFDETLTHFQNLLNRDKKSSSLVILLSKVLYELGTED
TKSVALQELTEYINEYGFDLTVTLAIAAITVVENVPENMKVILEELRLISLKDILQDKQR
NVPHLIKLLSEKLNIDGDGLETKVVSQRMAYFFPNSGKSWEGIDANIQQRVISGGQNRVT
AETLSMAQYSLGNLRSIQRSVFLCPWNRTALASLRECF
NT seq
4257 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaattgcgacagttgttgaaggacgcgaaactggaactctcccgcggcgactat
gaggaggcaatcgcactttcaaaggcagtcttggagatagacaaggacaattactttgca
tttgtgtttctcgggaaggcgtattcatcaattgaggggaagggccgtgaatctgtggag
agctacactagggcaacacagatcgatgctgcgaatttactcgcgtggaagggctttttt
ctgactttggaggaacactcaaaacgtttattccctggaatgctcacttgttccaagttc
ttcggactgtgtgtccagtacatgaaactgctgatagaacaagaacaatcgcaggtacaa
ctgataaactttgtgaagatcgtcaagtcacactatgcggatgacatcaacttcattctg
cccttcttagaatattttttgcctggaacggaaccgtttgaaatcctgggaagacacttg
ctcttaccgaaggaatcgctggctcagttgatcaggctcacatcgttgagagaatcgcaa
gagatttcaagagtgaccacggaacaccgactcaagctgagcactcaggatcctctttac
caatcaaaaatcaactctttcgcctgggagatctaccagaactccaaacttgataaatac
tacaatcagttgatcaatgttgtgaacgacgaccaggaacgtgcctcattggaaacccag
tggttggaataccgactcaaactgttgaagtcaatgcccgcagagaagaagcaagagttt
ttccctcgtgtgaaggatatggtcgacgggatggttgttgtgaagcacgactctttaatg
gcttggaaactgtattttgactgggaagactttgtagatctgaactcactggatgctaat
ctagtttgggagttcttccagaaatttccaaaggaaccactagctatgatcttgtattta
tggttaaactctaacctgtcatgttacgatacaagtaagctatcagaaaataataaacag
aattccagccccgctaaggaagcagataagggacaagatcaaacagaggtcgaagcttta
caggaagaggacgaccaacaagaggaagagctgggggagatgctcaacgcacaggaaaat
gaaacatcagatgtgttttcagaagaagcaatccttgtcgcacttatggataacatatcc
aaggtgaaaaacagcaccctagcttatcgtattgtctcacaatactacattttgaataaa
gaatacgaaatgtccctcccctatatcaagtcaggtatctccttagtctctgtcaacgta
cgggatctcggtgctaacttaataaatacaaagagagagttgacaatcgctctcgcaaca
ggatacacgtatgtggacgctccaaagaatcataaatttgccctctcattgtttgataag
atactcgagtcggacccagaaaacatccaggtgaaattggggaaggccatcatctcaata
gaaagtgcagattgggaagatgctggaaagttgttgacagatgtgattgcagaatcccca
gacaatcttgaagtgcagtcacaactggcttggtgcaaagcgcatttaaatgcgtttgat
aatgcaatcctgatgctgcagaatgtcatcaaaaacatagagggaactgaccaaagaact
atgcaattcagatgcgagaatatgtggcgtgaggcgaaagtccacataatgaagcacaga
ttcggcgaccaaggggaaaacatggacttgatcaacacggcattcaagatcttgatcagt
attatcaagcttgattcggaaacgtttgccaaaagttactcaacgttaggtgacatttac
gcatattattaccgcgacgatgttagggcatacaaatgctactataaatcgtttgaaatg
gactttactgatattcgggctgccaaatacatttgcgagatatacacagctgcaggaaac
tggaatgcggcagcgcagatatgtgaacgattggtgaaaaccgaagcgatcaagatggaa
ttgcgtagtacaaactggccttacagggttatcggaatagcatatttagaaaggcaacag
gagagtgagtcagttgaatggtttcactctgccctgcgtgtagatccgaacgatgtggaa
tcatgggtcgcattggggcaagcatattttgcgtgcggtcgtgtagaggcttcaaccaag
gtttttgaaaaagctatcgaaatcgaccctttgcatttgtacgctcagtacttcaactct
ttatcattggcagaaatgggttgttttgaggaatgcatcgagatattgaaaaatatcaca
cagttgaatccagaagaattggctttccaggtatcgtactcctcaattttggtgtcttac
gcttttgatttgtatcaacaaggcttcttaatgaagggtactgctagcgcaattcaagcg
attgaactcctcagacatatttctgtggactttagacacagtggtcaggatatatggctc
tctctttccaaagctatttatcttttcattttggttgaatcacaaatagagacgcttcct
ctagaatccatccttgagatattcggttccgtcgaaagttcaaaaattacagacgttgat
tcgatcgatggcattttatatgataacatcctacaagattcatcgagtgataatatcgct
atcgcgtgcaagtttttggttttggcctctaaatttgctctcgttactgtggatatagag
agcgtgtcggctacagttcgctcgtccatttggtgcaacattggcctatctgaacttgca
gcatatatgtcgttgaaggaggatggattgagagatgctgcaatttattcattcaaaaag
tgtatcaaatatcaaacgaacacattccaagcgtgggttggcctgggtattgccactatg
gatgttaattttagggtttcccagcactgtctcatcaaagcagcgtcatttgctccgaaa
gatatcagaacctggtttaacctagcgattttggggctaaagaaaaatgatattgacttt
gctcatgaagtgttgaccaggacccaaagtttatctcctgaaagtacggatccctggtta
ggtattgggttgataatggaacagatcggtaagcggacagagagccacaatgtgattgct
cacgcctacagtttatcgaagggtcagtctaaaaacgttcaatacttctatgcaaatagt
gttgttcagagacgggtggggtcaggaaatgatgaaggggacattgatgccatggaggag
ttgaatgcaactgcccttggtcttgagcaatatttcaaaaagaaaccaaatcacgcgcag
gccattgaccttgcgataatgatactggagaggcttcaaaattacaaagtcgcagacact
tttgcagcaaagctgacaggcatattcgaacaaaagtttgaagaatctcaggacgaagat
gatattgttaactatgccatcatcaaagctcagttggcgagaatccaactgggtttgggg
gagtataataaagccattgaaagcgcaaatttgtctgacggtattattggagattctacg
gcagagaattgcaagtcctcacaattgtctaacgcagtatgcctaggcctggccaatttc
tttctgggtaattttgacgaaacattaactcacttccaaaatctattgaaccgagataaa
aaatcgagtagtctagtcatccttttgtctaaagtactatatgagttgggtacagaggat
accaaatctgtagcgctgcaagagttgacggagtatatcaatgaatatggatttgactta
actgtgactctggcaattgctgctataacagtagtggagaatgttccagagaatatgaag
gtgattttagaagaactaaggttaatttcactgaaggacattttacaagataagcaaaga
aatgttccacatctaatcaaactactcagcgaaaaattgaatattgatggggatggtctt
gaaaccaaagttgtttcacaaagaatggcatatttctttcctaacagcgggaagtcatgg
gaagggattgacgcgaacattcaacaacgtgtgattagtgggggacagaaccgagttact
gcagaaactttgagtatggcccagtactcactaggaaacctaaggagtatacaacggagt
gtctttttatgtccatggaataggacagccttggcatcattaagagaatgcttttaa
DBGET
integrated database retrieval system
