Kazachstania naganishii: KNAG_0H01490
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Entry
KNAG_0H01490 CDS
T08174
Symbol
KNAG0H01490
Name
(RefSeq) hypothetical protein
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
kng
Kazachstania naganishii
Pathway
kng03022
Basal transcription factors
kng03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
kng00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
KNAG_0H01490 (KNAG0H01490)
09124 Replication and repair
03420 Nucleotide excision repair
KNAG_0H01490 (KNAG0H01490)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kng03021
]
KNAG_0H01490 (KNAG0H01490)
03400 DNA repair and recombination proteins [BR:
kng03400
]
KNAG_0H01490 (KNAG0H01490)
Transcription machinery [BR:
kng03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
KNAG_0H01490 (KNAG0H01490)
DNA repair and recombination proteins [BR:
kng03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
KNAG_0H01490 (KNAG0H01490)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
PIG-U
Motif
Other DBs
NCBI-GeneID:
34527295
NCBI-ProteinID:
XP_022465808
LinkDB
All DBs
Position
8:complement(263140..264699)
Genome browser
AA seq
519 aa
AA seq
DB search
MSLTANVLKHSVNQYLEEIPQQVQTRLYESPATCLAIYRLLPQLAKFFIMSMVFNDNDVS
LRDLDRWVKANGKIQFQEAIKSMKSLHLIIPTKGAGQLMIGLNPTFRDSFRNALTGGEVS
NSFGTVVNDDEDLRTGVLNMRLLDEYSANKWETILHFMVGTPMSEVPSSNVLNLLKHSKL
MEESEATGAFKITNEGFQFLLQEINSQIWTLLLQYLKMSESLQMDAVDVLNFIFMLGALE
VGKAYSTEGLSETQRIMIKDMRDYGIVFQKNSTSNVFYPTSLAIMLTSDSKTVLRTASGA
MNTVLSQNKEDTSSTNKSATDKANNDTAELDQVGTQSQEVQDGVLIVETNFKVYSYSNSP
LQIAILSLFVHLKSRFINMVTGQITKRSIINALDNGITAEQIIAYLETHAHPQMRRLAEA
QLEKKRELDQNCKDPLQILPPTVVDQIKLWQLEKDRVMAFEGSLYSDFESNAEYNILKKY
AQDIGVMLWSEDKKRKLFVSQEGNSQVLDYAKRKLRKKQ
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgactgcaaatgtactaaagcattccgtgaaccagtacctggaggaaatcccg
caacaggtccaaacgagactctatgagtctccagcgacatgtctggctatctatagacta
ctaccacagctagctaagtttttcattatgtcaatggtcttcaatgacaacgatgtgtcg
ctgagggacctggacaggtgggtcaaggccaacggtaaaatacagttccaagaggcgatc
aagtcgatgaaatcgttgcatctgatcatcccgacaaagggggccggccagttgatgata
ggtttgaacccaacgttcagggacagtttcagaaacgccctgacaggaggtgaggtgagt
aattcgttcgggacggtggtgaacgatgatgaggatctgaggacaggggtgctcaatatg
cggctgctggatgagtactctgcgaacaagtgggagacgatattgcattttatggtgggg
acaccgatgtctgaagttccgtcgagcaacgtactgaatttgttgaaacacagtaaacta
atggaggaatcagaggcgactggggcgttcaagatcaccaatgaggggttccagtttctg
ctacaggagatcaactcacagatctggacacttcttttgcaatacttgaagatgtcagag
agcttacaaatggacgccgtcgacgtgttgaactttatcttcatgttgggcgcgcttgaa
gtgggcaaagcttacagcacggagggtctcagcgaaacacaaaggattatgataaaggat
atgagagactacggtatcgtgttccaaaagaactcaacctcgaacgtcttttacccgaca
agcctggctatcatgttgacctctgactcgaagaccgtcctgagaacagcatccggtgcc
atgaacaccgttctaagccaaaacaaagaagacacgtctagcacaaacaagagcgccacg
gataaagcgaataacgacactgcggagctggaccaagtcgggacacagtcgcaagaggtc
caagacggtgtactgatcgtggaaacgaacttcaaagtatactcttactcgaattcacca
ctgcaaattgctatattgagtctgttcgttcacctgaagtcaaggtttatcaacatggtc
acaggccagataacgaagagatcgatcataaatgcgctagacaatggtatcactgcggag
cagatcatagcatacttggagacacatgcgcacccgcaaatgcgaaggttagcggaggct
caacttgagaagaaaagagagctggatcagaactgcaaggacccactgcaaatcctgccg
cccacggttgtagaccagatcaaactatggcagctcgagaaggacagagtgatggcgttc
gagggttcgttgtactcagacttcgaaagtaatgccgaatacaacatcctaaagaaatat
gcacaagatattggcgtgatgctctggtccgaggacaaaaagaggaaactgttcgtctca
caagaggggaactctcaagtcttggactacgctaaaaggaaactaaggaagaagcaatag
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