Kosakonia oryzendophytica: O9K67_18530
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Entry
O9K67_18530 CDS
T08786
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
koo
Kosakonia oryzendophytica
Pathway
koo00040
Pentose and glucuronate interconversions
koo01100
Metabolic pathways
koo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
koo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
O9K67_18530
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
O9K67_18530
Enzymes [BR:
koo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
O9K67_18530
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Motif
Pfam:
Pectate_lyase_2
Motif
Other DBs
NCBI-ProteinID:
WBT57132
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Position
3810863..3812572
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AA seq
569 aa
AA seq
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MKRSTLALTMSLVSLFSYHAAAQESARLSSVKTFADTVIDKAGDKQHPGVPLLANGVDPR
TGKQMVWIFPDGRTAVLSNFSAQQNLMRVLVGLSNLTGDPTYKQLAENNVRYYFQHYQDK
SGLLLWGGHRFIDLKTLQPEGPSEKEKVHELKNAYPYYELMFAVDKPATARFIRAFWNAH
VYDWKILETSRHGEYGKAMGKLWASDFEQQPPFFATKGLSFLNAGNDLIYSASLLWQYDH
EQGALTWAKRLAQQYVLPRDKKTGLGVYQFTQALKRAETTDDTDTHSKYGDRAQRQFGPE
FGPDALEGNMMLKGRTSTLYSENALMQLALAKSLGRDGEDIKKWTLDGLKAFAHYAYDAQ
TNSFRPMLANGTDLSGFVLKRDGYYGKKGTVLKPYPAGNEFLLSYARAWTLEQDAEIWKV
ARGIAQGQGLGDIGEPGGKNSKLDLNTQNSEPYAIFALIDLSQSTGNKSYLELADKVANN
ILASKRLNGFFVDDPGYVYANIDNIAPYALLALEAAFRGKPDAVAPFLNGAGFTEGAYRL
DDGSVRYSTRDDELFSLKPGEQLKPNGKK
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgttcaacactggcgctcacaatgagtctggtaagcctcttctcttatcacgcc
gcggcacaggagagcgcacgactgagcagcgtaaaaacctttgccgatacggttattgat
aaagctggcgataaacagcaccctggcgtaccgttgctggcaaatggcgtggatccgcgc
accggcaagcagatggtgtggatcttccccgacgggagaaccgccgtgctgtcaaacttt
tcggcgcagcagaacctgatgcgcgtcctggtggggctgagtaatttgaccggcgatccg
acctacaagcaactcgccgaaaacaacgtgcgctactatttccaacactatcaggataag
agcggcttgctgctctggggcgggcaccgctttattgatctaaagacgctgcaaccggaa
gggcccagcgaaaaagagaaagtgcatgagctgaaaaatgcctacccgtactacgagttg
atgtttgccgttgataaacccgccaccgcacgttttatccgcgcgttttggaatgcgcat
gtttatgactggaaaatacttgaaaccagtcgtcatggcgaatacggcaaagcaatgggc
aagctgtgggccagcgattttgaacaacagccaccgttcttcgccaccaaggggctgagt
ttcctgaatgccgggaacgacctgatctattccgcttccctgctctggcaatacgatcat
gaacaaggtgccttgacctgggcgaagcgactggcgcaacagtacgtgctgccccgcgat
aaaaagaccggactgggcgtttatcagttcacccaggcgctgaaacgcgctgaaaccacc
gacgacacggatacccactcgaaatatggcgatcgcgcacagcgtcagtttggcccggaa
ttcggcccggacgcgctggaaggcaatatgatgctgaaaggccgcaccagcaccctctat
tcggaaaatgcattaatgcagttggcgctggcaaaatcgctgggacgcgacggcgaggat
attaaaaaatggacgctggatggcctgaaagccttcgcccactacgcctatgatgcgcag
accaacagcttccgcccgatgctggctaacggcaccgatctttcgggcttcgtgctcaaa
cgcgatggctactacggtaaaaaaggaacggtgcttaaaccctatccggcaggcaacgag
tttctgctctcttacgcccgcgcctggacgctggagcaggacgcggagatatggaaagtg
gcgcgcggcattgcgcagggccaggggctgggagacattggcgaaccaggcggtaaaaac
agcaagctggatctgaatacccaaaacagcgaaccgtacgccattttcgcactgatcgac
ctgtcgcaatccaccggcaataaaagctaccttgaactggcggataaagtagcgaataac
atcctcgccagcaaacgtctgaacggtttctttgttgacgatcctggctatgtctacgcc
aacatcgataacatcgcgccttacgccctgctggcgctggaagccgcgtttcgtgggaaa
ccggatgctgtcgccccgttcctgaatggcgcgggtttcaccgaaggggcttatcgcctc
gacgatggcagtgtacgttactcaacgcgtgatgatgaactgttcagcctgaaacccggc
gagcagctaaaaccgaacgggaaaaaataa
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