Kangiella profundi: CW740_01920
Help
Entry
CW740_01920 CDS
T05254
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
kpd
Kangiella profundi
Pathway
kpd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
kpd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CW740_01920 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kpd03021
]
CW740_01920 (rpoB)
03400 DNA repair and recombination proteins [BR:
kpd03400
]
CW740_01920 (rpoB)
Enzymes [BR:
kpd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CW740_01920 (rpoB)
Transcription machinery [BR:
kpd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CW740_01920 (rpoB)
DNA repair and recombination proteins [BR:
kpd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CW740_01920 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
7TMR-HDED
DOCK-C2
Terminase_2
Motif
Other DBs
NCBI-ProteinID:
AUD78056
UniProt:
A0A2K9ACE7
LinkDB
All DBs
Position
393707..397774
Genome browser
AA seq
1355 aa
AA seq
DB search
MAYSYTEKKRIRKDFGRRSNILDVPYLLAIQKDSYREFLEPRGDEDSGLDSAFRSIFPIE
SYSGNAALEYVGYSLGEPVFNVKECQIRGITYAAPLRVKIRLVIYDKDSKTKKVKDIREQ
EVFMGELPLMTENGTFVINGTERVIVSQLHRSPGVFFDSDRGKTHSSGKLLYQARVIPYR
GSWLDFEFDPKDMLYVRIDRRRKLPASIILRSLGYNTQDMLDMFFERNNFYITKKGEVQL
ELIPSRLRGETATFEIKAKGKVVVEEGRRITPRHIAQLEKAGVKKLDVPTEYIYGRALAT
DIIDKESGEIIAEANAEITEEILEKMIEAGVTEVPTLYTNDLDHGPYMSDTLRIDSTRTP
LEAKVEIYRMMRPGEPPTQDAAEALFENLFFNLERYDLSRVGRMKFNRRVGRDEIEGEGT
LSNDDIIDVIKTLIDIRNGNGTVDDIDHLGNRRIRCVGEMAENQFRVGLVRVERAVKERL
SQAESENLMPQDLINAKPVSAAVKEFFGSSQLSQFMDQNNPLSEITHKRRVSALGPGGLT
RERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLACYARTNQYGFLETPYRRVADGKP
TAEVDYLSAIDEGKFVIAQANANLDKNGAFSDDLVPSRFQGEFMLATPEQVQYMDVSPQQ
IVSVAASMIPFLEHDDANRALMGSNMQRQAVPTLRAEKPLVGTGMERTVAVDSGVVVAAK
RGGVVDQVDASRVVIRVNEDEVGDNDSGVDIYNFTKYTRSNQNTCINQRPIVKQGDIVAR
GDVLADGPSTDLGELALGQNMRVAFMPWNGYNFEDSILISEKVVQEDRFTSIHIQELTCI
SRDTKLGPEEITADIPNVGESALSKLDESGIVYIGAEVKPGDILVGKVTPKGETQLTPEE
KLLRAIFGEKASDVKDTSLRVGTSTHGTVIDVQVFTRDGVEKDARAKEIENAEVARAKKD
LNDEFRILAESIYQRARNLVMGCVGEKGPNKFKKGSKITADYLDSLEPAQYLEIQLRVEE
KQQALESLANYLAEQRKEYDKKFEVQKLKITQGDDLAPGVQKIVKVYLAVKRRIQPGDKM
AGRHGNKGVISTIVPIEDMPYDENGEPVDIVLNPLGVPSRMNIGQILETHLGWAAKGVGI
KIGELLDTGKAPKTVRTFLNKVYNHRDDKAVDLSEMTDDEVMAMAANLRAGVPMATPVFD
GATEEDIHAMYELAELPKTGQSWLYDGRTGDRFERPVTVGYMYMLKLNHLIDDKMHARST
GSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTRMYKNI
VDGDHRMEPGMPESFNVLTKEIRSLAINIELEHED
NT seq
4068 nt
NT seq
+upstream
nt +downstream
nt
atggcatattcatacactgagaaaaagcgaatccgcaaggattttggtcgacgttccaat
attctcgatgtgccttatcttttggcaatccaaaaagattcataccgtgaatttcttgag
ccaagaggcgatgaggattcaggtttggactcagcgttcaggtctattttcccaattgaa
agttattcaggtaacgctgcactagaatacgttggatattcattaggcgaacctgtcttt
aatgttaaagaatgtcaaattcgtggcataacttatgctgcgccgcttcgcgttaaaatc
cgtctggtcatttatgataaagactctaagaccaaaaaagtaaaggatattcgcgagcag
gaagtatttatgggcgaactaccgttgatgacagaaaacggtactttcgttattaacggc
actgagcgtgttattgtttctcagttacaccgtagtcctggtgtgttcttcgattctgat
cgaggaaaaacgcacagctcaggaaaactattatatcaagcacgggtaattccttaccgt
ggttcatggttagactttgagtttgatccaaaagatatgctttacgtgcgaatcgaccgt
cgccgtaaattgccagcgtcaattattttgcgttcattgggttacaatacccaggacatg
cttgacatgttctttgagcgtaacaacttctacattactaagaaaggcgaagttcagtta
gaactgatcccttcgcgtttgcgtggtgaaaccgctacttttgaaattaaagccaaaggc
aaagtggttgttgaagaaggtcgtcgtattactcctcgacatattgctcagcttgaaaag
gccggtgttaagaagttggatgtgccaactgaatacatctatggccgtgcattagcaacc
gacattatcgataaggaatctggcgaaatcatagcagaagctaacgctgagattactgaa
gagatcttggaaaaaatgatcgaagcaggtgtaactgaggtgccaactctttacaccaat
gaccttgaccatggtccttacatgtcagataccttgcgtatcgattcaactcgcacacca
cttgaagcgaaagttgaaatctatcgcatgatgcgtccaggcgaaccgccgacacaggat
gctgcagaagcactatttgaaaatttattctttaatcttgaacgttatgacctgtcgcgc
gttggacgtatgaagttcaaccgtcgtgttggccgtgatgagattgaaggtgaaggtaca
ttatctaacgacgatatcattgatgttattaagacattgatcgatatccgtaacggtaac
ggtacagtcgatgacatcgaccacttaggtaaccgtcgtattcgttgcgttggtgaaatg
gctgagaaccaattccgtgtaggtttggttcgtgttgagcgcgctgttaaagagcgccta
tcgcaggctgaaagtgaaaaccttatgccgcaggatttgattaacgccaagccggtttcg
gctgccgttaaagaattctttggttctagccagttatctcagtttatggatcagaacaat
ccattgtctgagattactcacaagcgtcgtgtttctgcattaggccctggtggtttgacg
cgtgaacgcgcaggcttcgaggttcgagacgttcacccaactcactatggtcgtgtttgt
ccgattgaaaccccggaaggtccaaacattggtttgattaactcattggcgtgttatgcc
agaacaaaccagtatggtttccttgaaactccttaccgccgtgttgctgatggtaagcca
acggcagaagttgattacttgtctgcaatcgacgaaggcaagttcgtgattgcacaggct
aacgccaaccttgataagaatggtgcattctcagatgacctggttccatcgcgtttccag
ggcgagttcatgttagccactccggaacaggttcaatatatggacgtatcgccacagcag
atcgtatctgttgcagcgagtatgattccattccttgagcacgatgatgcgaaccgtgca
ttgatgggttctaacatgcaacgtcaggcagttccaactttacgagctgaaaagccattg
gttggtactggtatggaaagaaccgttgctgttgattcgggtgttgtggttgcagcaaaa
cgtggcggtgttgttgatcaggttgatgccagccgtgttgtaatccgcgttaatgaagat
gaggtgggcgataacgattctggtgttgatatttataacttcaccaaatatacgcgctct
aaccagaatacatgtattaaccagcgtcctattgttaagcagggcgacattgttgctcgt
ggcgatgtacttgcggatggcccatcaactgaccttggtgagctagcgcttggtcaaaat
atgcgtgtggcgttcatgccgtggaatggttacaacttcgaggattcgatcctaatctct
gaaaaagtggtacaggaagatcgtttcaccagtatccatattcaggagctaacctgtatt
tctcgtgatactaagcttggtccagaagaaattaccgccgatatcccgaatgttggtgaa
agtgcgctaagcaaacttgatgaatcaggtattgtttatattggtgcagaggttaaacca
ggtgacattctagtcggtaaagttactcctaaaggtgaaactcaacttactccagaggag
aagttgttgcgtgccatctttggtgagaaagcttccgatgtgaaagatacatcactacgt
gtgggcacttctacacatggtacggttatcgacgttcaagtctttacccgtgacggtgtt
gaaaaagatgctcgtgcaaaagaaattgaaaatgctgaagtagctagagcgaagaaggac
ttaaatgatgagttccgtattctggctgaaagtatttaccagcgtgcacgtaacctggtt
atgggttgtgttggtgaaaaaggtccaaacaagtttaagaaaggtagcaaaattactgct
gactacttagacagccttgaacctgctcagtatttagaaattcagttacgtgttgaagaa
aaacaacaggcactggaaagcttggctaactaccttgccgaacagcgtaaagagtacgac
aagaaatttgaagtacagaagctaaaaattactcaaggtgatgatttggctcctggtgtg
cagaaaatcgttaaggtttatcttgcagttaaacgtcgaattcagcctggtgataagatg
gctggtcgtcacggtaacaaaggtgtgatttcaaccattgttccaattgaagatatgcca
tatgacgaaaacggcgagccagtggatattgttctgaatcctctgggcgttccttcacgt
atgaacattggtcagattctagaaacgcatctggggtgggccgcaaaaggtgttggtatc
aaaattggtgaattactggataccggtaaagctccaaaaactgtacgtacgttcctcaat
aaggtttacaaccatcgcgatgacaaggctgtcgatttgtcagaaatgacagacgacgag
gtaatggcaatggctgcaaacctacgtgccggtgtgccaatggctacacctgtattcgat
ggtgcgacagaagaagatattcatgccatgtatgaattggctgaactgcctaagactggc
caaagctggttatatgatggccgtaccggtgatcgttttgaacgtccggtaaccgttggc
tacatgtacatgcttaaactgaatcacttgattgacgacaagatgcacgctcgttcaaca
ggttcgtacagcttggttacccagcaaccattgggtggtaaagctcagttcggtggtcag
cgtttcggtgagatggaggtgtgggcactggaagcttacggtgctgcttataccttgcaa
gaaatgctcacagttaagtcggatgatgtgaatggccgtacccgcatgtacaaaaacatt
gtggatggcgaccatcgcatggagccgggtatgcctgagtcattcaatgtattgactaag
gaaatccgctcattggcgattaacattgagcttgagcacgaagattaa
DBGET
integrated database retrieval system
