Kwoniella pini: 30171136
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Entry
30171136 CDS
T10980
Symbol
I206_102420
Name
(RefSeq) uncharacterized protein
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
kpin Kwoniella pini
Pathway
kpin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kpin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
30171136 (I206_102420)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kpin03019
]
30171136 (I206_102420)
Messenger RNA biogenesis [BR:
kpin03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
30171136 (I206_102420)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
30171136 (I206_102420)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
DUF3819
CNOT1_TTP_bind
ARM_Cnot1
CNOT1_HEAT
NOT1_connector
AbiEi_2
Motif
Other DBs
NCBI-GeneID:
30171136
NCBI-ProteinID:
XP_070058659
UniProt:
A0AAJ8MM26
LinkDB
All DBs
Position
3:complement(join(571816..572159,572223..573792,573859..576801,576858..577646,577700..578680,578737..579015))
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AA seq
2301 aa
AA seq
DB search
MSIPPPGLGGGVNRTGPPPGFGSGNVGVTHSPASDASGTISNTGINGGSASSAQGGRRDG
QGGPAVIIRAQIVFLLTTFTEDNFDKMSNEIRTLASSNGPDMYHHFLRRAIAVANPILQI
LIQHSQQYKDDPAAPPPQLPTTGQAALVWRLLVTEAIRAARDVQLAPHFSFIMLTPAQST
PLPLPSLRLFNLPPALMFSLSSNTLASPHVFPPSHASFAVFHAILSQTFQPTMELLRSPN
VPFWTMNTIPGREPYTDDMTLQEARTLMLALFPRSQSSSGGNPTSRPATPTNPTSPHSSP
LNSMQRQALLGSLTVKFSSPAIILQTLSALSPGGPPRSPGTVPLEDILFELGENLTQDEG
TVEAVVGRWWGPYLLEGLSPEEQRAQVTEEACHVIHGLCEGLRLGRSVDLHGVIKGMSGI
PSISWPDVVRSFDSPLTIAAYQTSIPLVICLIYVPPQVPFPPLAGLLPASLDAPIWENIS
SLLSVLSLLTNLPPDAMPIFTMPTAPSPQSYARIVDPPTSDSQWSKVARQQANDLQGAGL
WNTLGLIQVLVNACGLAETDHPSEREREERADIGRRATDILESAAKLAPELVLLALEKLP
VSAQRRSNADHAQKPLPPSVANMHTRLLAVYLSSAANTMTSSALVFQQMWQASPEGLLSV
LLEFYGEDENNLGRIVEIATELKVLDKLLASENLHFTLDVAALASNKDLLNLEKWLADGI
EVKGEDFLEAIFDFVEHKIRLEVDHQHAPESAPPLLYTLGTNVYSIFIRVVRSASNLSRE
DVARFKHLRTDILILNPRLLNLRPGSKAEQGFSEAKFPKEIVEKVDEMYQQMYSGQLKLD
DVIDELKRCQKSDDPVDQDTFAHALHSLFDEFKFVKAYPPKELTMTGLLFGAIIDYRLVK
DTSAFVATRYVLDACKTPPHEALYQFGINALSILRNSLVDFPGLCRSLLEIPALHESHPV
LINDIHQALQEREELDMQGGVKLAFPALKLPILIEEGDDEFREPDSRKKDAFMFIINQIA
PSNYEQKAHDLTDLFENQYSRWFAHYFIDVRVSLEMNRHDIYMQILEALHSPVFEKHVLW
ETYRKARDLLNSEATMNSASERTTLKTVASWLGKITLARNKPIKLRELSVKDLLIQGFDT
KRLIVAIPFVCNLILSCKDSVVFHTPNPWLMAILRLLAEFYHFAELRLNLKFEIEVLFSK
LGVELESIEPSNQLRLHVPPPPPQEELPNRLDLELQRATSEIMNGGQRFSELPGNEAYAR
MQQLQTEAAAQAAQDAMTRRVDELIAQLPQYLVFNQDYPIFTAPTLKRIVHHSIDRAIRE
IIGPVIERSVTIAGISSRDLIQKDFGMEGDAVKMRSAAHMMVQNLAGSLALVTCKEPLRT
SMIGNIKQMLEQNGYTDDSMPDAMIAGVVNQNLDVACSVLKKAAMEKAAKDIDVNLAPQY
AARKAHQNLRSQAPFWDGASFGFALSHNALPDPLKLRPGGLTAQQFRVYEDFGEPTRMIS
HPTPPTNGDYLVAQYRDLNLNDGLVPSDIKRGPSPRAFNQNAIEGPESVASPQAIPPQTS
VDKFHEIASEIEKLLSQTTITNISALPAEHEIRGFIRSIVIIANQSVHRDSTTLTIAQKV
VQLLYRSTAQLAREVYVYLLQQLCDLSPKVSREVKQWLVYAEDPRKFNVPVTVTLIRAQS
ISVHELDAALAQLIVRSYAQEIVDFVAQLIRECSISENAFIPRNGFASSLAALLKAQEIS
RATPLADALLNELRGGTVKSPNVPTPDAKPGIDGKLQERLSHYFLEWVRVFSTSKNAEIA
FVPYITYLQKEGILNGEDVSSAFYRTAINTAVDLDTAKLQQGFFYGTDALAKLIVLIVKN
YGDKSGTSSVQRTVYYYNKIITIMSYSLVQKQLEMGDAFNQRPWARFFTSMLSELQSIEY
NLPETYLGCLKHFANNLGITQPTYAPRFAFGWISIVSHRLFMPKLLATARDDGWPEYHRC
VMWLLRFLSPFLSANDQMSPSSRSIFKATIKLLVILMHDFPEFLVEFYHTLSTAIPPHCV
QMRNIILAAFPSSEAPLPDPYKRLDLLVPDMQRFPIVRSDYIGALTDGNLKSAIDQHVRN
GVPALPSIVNELKNRIAVKSLTNGNSAQDGTSHSNVTWNHTLLHAAVFYLGTTAVARRAQ
QTGHVDFDSKAPEVGVLNGLVHAFDAEGQYYMLSVIADQLRYPSAHTSFFIHLILFLFGT
SSRTPEGQPPSAVPERIARILLERTIVQRPHPWGLLVAFIELLDNEVYGFWKQPFVRVDE
DVYRLFGQVRQSVTARRESQA
NT seq
6906 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatccctcctcccggactgggaggtggggtcaataggaccggtccaccgccggga
tttggtagtggaaatgtcggagtaacacattcgccagctagtgatgccagtggtacaata
tctaatacaggtatcaacggcggaagtgctagtagtgcacaaggaggaaggagagatggg
caaggaggtccagcagtaatcattagggcacaaattgtctttctgttgactacttttaca
gaagataatttcgataaaatgtcgaatgaaatccgaacgctcgcctcatcaaacggacca
gacatgtaccatcacttccttcgcagggcgattgcggtagctaacccaatccttcaaata
cttattcaacattctcaacaatataaagacgatcccgctgccccaccccctcaattacct
acaacaggtcaagctgctctagtttggcgattattagtgacagaagctattcgagcagca
agagatgttcagttggcaccacatttctcatttatcatgttaacacctgctcaatcaaca
cctttacccttaccatcattacgattattcaacctacctccagcattgatgttctcctta
tcttcaaacacgctcgcatcgcctcacgttttcccaccatcacacgcatcattcgcagta
tttcacgccattttatcgcagaccttccagcctacgatggaattgttacgatcacctaac
gtaccgttttggacaatgaatacgataccaggaagagaaccttatacagatgatatgact
ctgcaagaagccagaactctgatgttggcattgttccctcgatcgcaatcttcttctggt
ggtaatccaacatctagacccgctacaccaacaaatcccacttcaccacattcatcaccc
ctcaactcgatgcaacgtcaagccctccttggatcgttgacggtcaaattttcctcaccc
gccatcattctgcaaactctctcagcattgtctcccggtggcccgccaagatcgcctggt
accgttccacttgaagatattctgttcgaattgggcgaaaatctcacgcaagatgagggt
actgtagaagcggtcgtgggaagatggtggggtccatatctgcttgaaggattgtcgcct
gaagaacaacgagcacaagtcaccgaggaggcatgtcatgttatacacggcttatgcgaa
ggattacgactgggtcgctccgtcgacttgcacggtgtcatcaaagggatgtctggtatc
ccatcgatatcatggcctgacgtcgtccgatctttcgactctccgctcacaatagccgct
taccaaacatccattccccttgtcatctgcttgatatatgttcctcctcaagtaccgttc
cctcccctcgctggtcttctacctgcttccttagatgctccaatttgggagaacatatcg
tccctcctttcagtcctatctcttctcacaaatttaccgcccgacgcgatgccaatattc
accatgccaactgctccttcgcctcaatcctacgctcgtattgtcgatcctccaacttcg
gactcacagtggagtaaagtagctcgacaacaagcgaacgatcttcaaggtgcaggttta
tggaacacattaggtttgattcaagttctggtcaatgcttgcggcttagcagagactgat
catccttcggaaagggaaagggaagaaagggctgatattggtcgaagagcgacggacatt
ctagagtccgcagcgaaactggcgccagaactagtattactcgctctggaaaagctacct
gtgagtgctcaacgtcgcagcaacgctgaccacgcgcagaaaccacttcctccatctgtt
gcaaacatgcatactcggctcttagctgtatacctttcctctgcagcgaacacgatgact
tcctccgctttggtcttccagcaaatgtggcaagctagtcctgaaggcttgttgtcggtt
ctgctagagttttacggtgaggatgagaataacctaggaaggatagtagagattgctaca
gagctcaaggttcttgacaaactccttgcttccgaaaatctccattttactcttgacgtc
gctgctctcgcctcaaacaaggatttgctgaatctcgagaaatggctcgcggatggaatt
gaggtcaaaggggaagactttttggaggcgatctttgactttgtggaacataagattcgt
ttggaagtcgatcatcaacatgctccagaatctgctcctcccctcctttacaccctgggc
accaacgtatattccattttcatccgagtggtccgaagcgcatcgaatctctctcgagaa
gatgtagctcgattcaagcatctcagaactgacattctcattctcaaccctcgactactc
aatctcaggcctggaagcaaagctgagcaaggcttttcggaagctaaattccctaaggag
attgtggagaaggttgatgagatgtatcagcagatgtacagcggacaattgaaattggac
gacgtgatagacgagctcaaacgatgtcagaagtcggatgacccagtcgaccaagatacc
tttgctcacgccctccattctttgttcgacgagttcaagttcgtcaaggcctatccaccg
aaggagctcaccatgaccggtcttctgtttggtgctatcatcgattatcgacttgtcaag
gacacttcagcattcgtggctacgagatacgtgctggatgcctgcaagactccacctcat
gaagctctttatcaatttggtatcaacgctctcagcattttacgcaactccttggttgat
ttcccggggctttgtcgatcccttttggaaatacccgcacttcacgaatctcaccctgtc
ttgatcaacgatatacatcaagcccttcaggaaagagaagagctagacatgcagggtggt
gttaaattagctttccctgcactcaaattgcccatcctgattgaagaaggtgatgacgag
ttcagggaaccggactcgaggaagaaggatgctttcatgttcatcatcaatcaaattgcc
cctagcaactacgaacagaaagctcacgatcttaccgatcttttcgagaaccagtactcc
cgatggttcgctcattactttattgatgtgcgagtcagtcttgaaatgaatcgacacgac
atttatatgcaaatcctcgaagctctccactcccccgtcttcgagaaacacgtactctgg
gagacatacagaaaagctagagatttgctcaattcagaagcaaccatgaattcagcttcc
gagaggacgacacttaaaactgtcgcgagttggttaggaaaaatcaccttggcccgaaac
aagccgatcaagctcagagaattatcagtcaaagatcttttgatccagggtttcgatacc
aaacgactcatcgtcgcgatccctttcgtctgcaatcttattctttcttgcaaagactcc
gtggtcttccatacaccaaatccttggcttatggccatccttcgacttctcgccgagttc
tatcattttgctgaactccgattgaacctcaaattcgaaatcgaagttttgttcagcaag
ctgggcgtagagttggaatccattgaaccctcaaaccagcttcgattgcacgtaccgcct
cctccacctcaagaggaattgcccaatcgacttgatttggaattgcagcgagcgaccagc
gaaatcatgaacgggggtcagcgattctcagaactacctggcaacgaagcttatgcaagg
atgcaacaactgcaaaccgaagctgctgctcaagctgctcaagatgctatgacacgaaga
gttgatgagctcattgcacaattaccgcaatatctcgttttcaaccaggattaccctatt
ttcaccgctcctacactcaagcgaatcgtccaccactcgatcgatcgagctatcagagaa
atcattggccccgtcatcgaaagatcagtgactattgctggtatctcctcccgggatcta
atccagaaggacttcggaatggaaggcgacgcagtcaagatgagatcagcagctcacatg
atggttcaaaaccttgctggaagtttggctttggtcacctgtaaagaaccgctaagaaca
agcatgattgggaatatcaagcaaatgttggaacaaaatggatataccgatgactccatg
cctgatgctatgattgccggagtagttaaccaaaatctcgatgtcgcttgttcagtcttg
aaaaaagcagctatggagaaagccgcaaaggatatcgatgtcaatctagcacctcaatac
gctgctagaaaagcgcaccagaatttgcgatctcaagctccattctgggatggtgcttcc
tttggctttgccctctcgcacaatgctcttccagatccactgaaacttcgacctggaggg
ctcaccgctcaacagttcagggtatacgaggatttcggtgaaccgacaagaatgatttct
catcctactccacccaccaatggcgattacctagtagcacagtacagagatttgaacctg
aatgacggtctcgtcccttccgatatcaagcgtggaccatcaccaagggcattcaaccaa
aacgccatcgagggccctgaatccgttgcttctcctcaagctattccaccccagactagc
gtcgacaagttccacgagattgcttcggagattgagaaacttctctcgcaaacaactatc
accaacatctccgccttacccgccgaacatgaaatcagaggttttattagaagcattgtt
atcatcgccaatcaatcggtacacagagattctacaactctgactatcgctcaaaaggtt
gtccaattgctctacaggtcgactgctcagctcgctagagaagtgtatgtttaccttctt
caacagctttgcgacttatcgcctaaggtgagcagagaggtcaagcaatggttggtgtac
gctgaggatccgcgaaagttcaatgtacctgtcactgttactcttatccgagctcagtct
atcagcgttcatgaactcgatgctgctcttgctcagctcatcgtgcgatcatacgctcag
gagatcgttgattttgtcgcgcagttaatcagggagtgttctatctcagagaacgctttt
atacctaggaatggctttgccagtagtttagccgctttacttaaagcacaagaaattagt
cgagctactccgctcgcagatgcgcttctcaacgaacttcgaggtggtacagtcaaatcg
ccaaatgtgcctactccagatgctaaacccggaatcgatggcaaactgcaggaaaggtta
tctcattacttcctcgagtgggtcagagtcttcagcactagcaagaacgccgaaatcgct
tttgtaccctacatcacctacttgcagaaagaaggtatcctcaacggtgaagacgtttca
tccgcattctacagaacagctatcaacactgctgttgatctcgatactgccaaactccaa
caaggtttcttctacggcaccgatgctttggccaaattgatcgttctcattgtcaaaaat
tacggtgacaagagtggaactagcagtgtacaaagaaccgtatattattacaacaagatc
atcaccatcatgtcatactcgctcgttcagaaacaactcgaaatgggcgatgcgttcaat
cagagaccttgggctaggtttttcaccagcatgttgagtgaattgcaatctatcgaatac
aatcttccggaaacttatctgggatgcctgaaacatttcgccaacaaccttggaataacc
caaccaacctacgcacctagattcgcttttggctggatatccatcgtttctcatcgattg
ttcatgcctaagttgctcgctactgctcgagatgatgggtggccagagtaccatagatgc
gtcatgtggttattacgattcctctcaccgttcctatcggccaatgaccaaatgtcacct
tcttcaagatcaattttcaaggctaccatcaaattgctggtcatcctgatgcacgatttc
cccgaattcttggttgaattctatcacactctttctactgcaatcccgcctcattgcgta
caaatgcgtaatatcatactcgctgctttcccatcttccgaagcacctctgccagatcct
tacaagcggttagatcttcttgtccctgatatgcagcgattccccatcgtccgatcagat
tacattggggccctcacagatggaaatctcaaatctgcaattgaccaacatgtaagaaat
ggtgtaccggctttaccatccatagtgaacgaattgaagaatcgaattgccgtcaagtca
ctcactaatgggaactccgcacaagatggcacctctcactcgaacgtgacttggaatcat
accttgctacatgctgcggtattctacttgggtaccacggctgtcgctcgccgagctcaa
cagacaggccatgtcgatttcgattcgaaggctcctgaagttggagttttgaatggtctc
gtacatgcttttgatgctgagggccaatactacatgcttagtgtcatcgccgatcaactt
cgatacccttcagctcatacatcgttcttcatccacttaatacttttcttgtttggtact
tcctccagaactcccgaaggtcaaccaccttcagctgtccccgaacgaatcgctagaata
ctcctcgaacgaacaatcgttcaacgacctcacccttggggactgttggtcgctttcatc
gaattactcgacaacgaagtttatgggttctggaagcagccctttgtcagagtggatgaa
gacgtttataggttattcggacaggtcagacagagcgtcacggctagaagggaatcgcaa
gcttga
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integrated database retrieval system
