Klebsiella pneumoniae KCTC 2242: KPN2242_24775
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Entry
KPN2242_24775 CDS
T01982
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
kpo
Klebsiella pneumoniae KCTC 2242
Pathway
kpo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
kpo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KPN2242_24775 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kpo03021
]
KPN2242_24775 (rpoB)
03400 DNA repair and recombination proteins [BR:
kpo03400
]
KPN2242_24775 (rpoB)
Enzymes [BR:
kpo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KPN2242_24775 (rpoB)
Transcription machinery [BR:
kpo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KPN2242_24775 (rpoB)
DNA repair and recombination proteins [BR:
kpo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KPN2242_24775 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-ProteinID:
AEK00827
LinkDB
All DBs
Position
5224457..5228479
Genome browser
AA seq
1340 aa
AA seq
DB search
MVYSYTEKKRIRKDFGKRPQVLDVPYLLSIQLDSFQKFIEQDPEGQYGLEAAFRSVFPIQ
SYSGNSELQYVSYRLGEPVFDVKECQIRGVTYSAPLRVKLRLVIYEREAPEGTVKDIKEQ
EVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARIIPYR
GSWLDFEFDPKDNLFVRIDRRRKLPATIILRALNYTTEQILDLFFEKVVFEIRDNKLQME
LIPERLRGETASFDIEANGKVYVEKGRRITARHIRQLEKDDIKHIEVPVEYIAGKVAAKD
YIDEATGELICPANMELSLDLLAKLSQSGHKRIETLFTNDLDHGPYISETVRVDPTNDRL
SALVEIYRMMRPGEPPTREAAESLFENLFFSEDRYDLSAVGRMKFNRSLLRDEIEGSGIL
SKDDIIEVMKKLIDIRNGKGEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLS
LGDLDTLMPQDMINAKPISAAVKEFSSQLSQFMDQNNPLSEITHKRRISALGPGGLTRER
AGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYAQTNEYGFLETPYRKVTDGVVTDE
IHYLSAIEEGNYVIAQANSNLDENGHFVEDLVTCRSKGESSLFSRDQVDYMDVSTQQVVS
VGASLIPFLEHDDANRALMGANMQRQAVPTLRADKPLVGTGMERAVAVDSGVTAVAKRGG
TVQYVDASRIVIKVNEDEMYPGEAGIDIYNLTKYTRSNQNTCINQMPCVSLGEPIERGDV
LADGPSTDLGELALGQNMRVAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELACVSRD
TKLGPEEITADIPNVGEAALSKLDESGIVYIGAEVTGGDILVGKVTPKGETQLTPEEKLL
RAIFGEKASDVKDSSLRVPNGVSGTVIDVQVFTRDGVEKDKRALEIEEMQLKQAKKDLSE
ELQILEAGLFSRIYAVLVSGGVEAEKLDKLPRDRWLELGLTDEEKQNQLEQLAEQYDELK
HEFEKKLEAKRRKITQGDDLAPGVLKIVKVYLAVKRRIQPGDKMAGRHGNKGVISKINPI
EDMPHDANGTPVDIVLNPLGVPSRMNIGQILETHLGMAAKGIGDKINAMLKQQQEVAKLR
EFIQRAYDLGADVRQKVDLNTFSDEEVLRLAENLRKGMPIATPVFDGAKEAEIKELLQLG
DLPTSGQITLFDGRTGEQFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGGK
AQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGNHQMEPGMPES
FNVLLKEIRSLGINIELEDE
NT seq
4023 nt
NT seq
+upstream
nt +downstream
nt
atggtttactcctataccgagaaaaaacgtattcgtaaggattttggtaaacgtccacaa
gttctggatgtgccatatctcctttctatccagcttgactcgttccagaagtttatcgag
caagatcctgaagggcagtatggtctggaagctgctttccgttccgtattcccgattcag
agctacagcggtaattccgagctgcaatacgtcagctaccgtctgggcgaaccggttttt
gacgttaaagaatgtcagatccgtggcgtgacttattctgcaccgctgcgcgtaaaactg
cgtctggtgatctacgagcgcgaagcgccagaaggcaccgtcaaagacattaaagaacaa
gaagtctacatgggcgaaattccgctcatgaccgacaacggtacctttgttatcaacggt
accgagcgtgttatcgtttctcagctgcaccgtagcccgggcgtcttctttgacagtgac
aaaggtaagacccactcctccggtaaggttctgtataacgcacgtatcatcccttaccgc
ggttcctggctggacttcgaattcgacccgaaagacaacctgttcgttcgtatcgaccgt
cgtcgtaagctgccggctaccatcatcctgcgcgcgctgaattacaccactgagcagatc
cttgacctgttcttcgaaaaagtggtctttgaaattcgcgacaacaagctgcagatggag
ctgattccggagcgtctgcgcggtgaaactgcctccttcgatatcgaagccaacggcaaa
gtgtacgttgagaaaggccgtcgcatcacggctcgtcatatccgtcagctggaaaaagac
gatatcaagcatatcgaagtgccagttgaatatatcgcgggcaaagtggcggctaaagac
tatatcgatgaagcgactggcgaactgatctgcccggcgaacatggagctgagcctggat
ctgctggctaagctgagccagtctggccacaagcgtatcgaaacgctgttcaccaacgat
ctggaccacggcccgtacatctctgaaacggtacgcgtcgacccgactaacgatcgtctg
agcgcgctggtagaaatctaccgcatgatgcgccctggcgagccgccgactcgtgaagcc
gctgaaagtctgtttgagaacctgttcttctcagaagaccgctacgatctgtccgcggtt
ggtcgtatgaagttcaaccgttctctgctgcgcgacgaaatcgaaggttccggtatcctg
agcaaagacgacatcatcgaagtgatgaagaagctcatcgatatccgtaacggtaaaggc
gaagtggacgatatcgaccacctcggcaaccgtcgtatccgttccgttggcgaaatggcg
gaaaaccagttccgcgttggcctggtacgtgtagagcgtgcggtgaaagagcgtctgtct
cttggcgatctggataccctgatgcctcaggatatgatcaacgccaagccgatttccgca
gcagtgaaagagttttctagccagctgtctcagtttatggaccagaacaacccgctgtct
gagattacgcacaaacgtcgtatctccgcactcggcccaggcggtctgacccgtgagcgc
gcaggcttcgaagttcgagacgtacacccgacccactacggtcgcgtatgtccgatcgaa
acgcctgaaggtccgaacatcggtctgattaactccctgtccgtgtacgcgcagaccaac
gaatatggcttccttgagacgccgtatcgtaaagtgaccgacggtgtggttactgacgaa
attcactacctgtctgctatcgaagaaggcaactacgttatcgctcaggcgaactccaac
ctggatgaaaacggccacttcgtagaagatctggttacctgccgtagcaaaggcgaatcc
agcttgttcagccgcgaccaggttgactacatggacgtatccacccagcaggtggtatcc
gtcggtgcgtccctgatcccgttcctggaacacgatgacgccaaccgtgcattgatgggt
gcgaacatgcaacgtcaggcggttccgactctgcgcgctgataagccgctggttggtacc
ggtatggaacgtgctgttgccgttgactccggtgttactgccgtggctaaacgtggcggt
accgttcagtacgtggatgcttcccgtatcgttatcaaagttaacgaagacgagatgtac
ccgggcgaagcaggtatcgacatctataacctgaccaagtacacccgttctaaccagaac
acctgcatcaaccagatgccttgcgtgtccctgggcgaacctattgagcgcggcgacgtg
ctggcagacggcccgtccaccgacctcggtgagctggcgctgggtcagaacatgcgtgta
gcgttcatgccgtggaacggttacaacttcgaagactccatcctcgtttccgagcgtgtt
gtccaggaagaccgtttcaccactatccacattcaggaactggcgtgcgtgtcccgtgac
accaagctggggccggaagagatcaccgctgacatcccgaacgtgggtgaagctgcgctc
tccaaactggatgaatccggtatcgtttatatcggtgcggaagtgaccggcggcgacatt
ctggttggtaaggtaacgccgaaaggtgaaacccagctgacgccggaagagaaactgctg
cgcgcgatcttcggtgagaaagcgtctgatgttaaagactcttctctgcgcgtaccgaac
ggtgtctctggtaccgttatcgacgttcaggtctttacccgtgacggcgtagaaaaagac
aaacgtgctctggaaatcgaagagatgcagctgaagcaggccaaaaaagacctgtctgaa
gaactgcagatcctcgaagccggtctgttcagtcgtatctacgcggtgctggtctccggt
ggcgttgaagctgagaagctcgacaagctgcctcgcgatcgctggctggaactgggcctg
accgacgaagagaaacaaaatcagctggaacagctggctgagcagtatgacgaactgaaa
cacgagttcgagaaaaaactcgaagcgaaacgccgtaaaatcacccaaggcgacgatctg
gcaccgggcgtgctgaagattgttaaggtatatctggccgttaaacgccgtatccagcct
ggtgataagatggcaggtcgtcacggtaacaagggtgttatctctaagatcaacccgatc
gaagatatgccgcacgatgctaacggtacgccggtagatatcgtactgaacccgctgggc
gtaccgtctcgtatgaacatcggtcagatccttgaaactcacctgggtatggctgcaaaa
ggcatcggcgataagatcaacgccatgctgaaacagcagcaggaagtcgcgaaactgcgc
gaattcatccagcgtgcttacgatctgggcgctgacgttcgccagaaagttgacctgaat
accttcagcgatgaagaagttctgcgtctggctgaaaacctgcgtaaaggcatgccgatc
gcaacgccggtattcgacggtgcgaaagaagctgaaatcaaagagctgctgcagctgggc
gacctgccgacttccggtcagatcaccctgtttgatggccgcaccggtgaacagttcgaa
cgtccggtaaccgtgggttacatgtacatgctgaaactgaaccacctggtcgacgacaaa
atgcacgctcgttccaccggttcttacagcctggttactcagcagccgctgggtggtaag
gcacagttcggtggtcagcgcttcggtgagatggaagtgtgggcgctggaagcatacggc
gcggcctacaccctgcaggaaatgctcaccgttaagtctgatgacgtgaacggtcgtacc
aagatgtataaaaacatcgtggacggcaatcaccagatggaaccgggcatgccggaatcc
ttcaacgtactgttgaaagaaattcgctcgctgggcatcaacatcgaactggaagacgag
taa
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integrated database retrieval system
