Kosakonia pseudosacchari: IP581_19005
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Entry
IP581_19005 CDS
T06897
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
kpse
Kosakonia pseudosacchari
Pathway
kpse03410
Base excision repair
kpse03430
Mismatch repair
kpse03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kpse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IP581_19005 (recJ)
03430 Mismatch repair
IP581_19005 (recJ)
03440 Homologous recombination
IP581_19005 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kpse03400
]
IP581_19005 (recJ)
DNA repair and recombination proteins [BR:
kpse03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
IP581_19005 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
IP581_19005 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
IP581_19005 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
RecJ_OB
PEP-utilizers
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
QOV63315
LinkDB
All DBs
Position
complement(4026481..4028214)
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AA seq
577 aa
AA seq
DB search
MKAQIQLRRREVDDAAELAEDLPPLLRRLYASRGVRTASELERSVKGMLPWQQLTGIDEA
VAQLYNALREGLRIIVVGDFDADGATSTALSVLALRALGCENVSYLVPNRFDDGYGLSPE
VVDQAHARGAQLILTVDNGISSHAGVARAHELGIPVVVTDHHLPGDTLPDAEAIVNPNLR
DCDFPSKSLAGVGVAFYLMLALRAFLRDSGWFEARGLAMPNLAELLDLVALGTVADVVPL
DANNRILTWQGLSRIRAGRCRPGIKALLEIANRDAQKLAASDLGFALGPRLNAAGRLDDM
SVGVALLLCDNLGEARQLASDLDALNQTRKEIEQGMQAEALTLCEQLERSGETLPGGLAM
YHPEWHQGVVGILASRIKERFHRPVIAFAPAGDGVLKGSGRSIQGLHMRDALERLDMLFP
GMMLKFGGHAMAAGLTLEENRFDEFRQRFGELVTEWLDPALLQGEIVSDGPLSAQEMTLE
VAEMLREAGPWGQMFPEPLFDGEFRLLQQRLVGERHLKVMLEPVGGGPLLDGIAFNVDTT
CWPDNGVRQVNIAYKLDVNEFRGNRSVQLIIEHLWPL
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagctcagatacaacttcgccgccgtgaggtggatgacgcagcagaactggccgaa
gacttgccgccgctgctgcgtcgcttatacgccagccgcggtgtgcgcacggccagtgaa
ctggagcgcagcgttaaaggcatgctgccgtggcaacaacttaccggtatcgatgaagct
gtggcgcagctttacaacgctttgcgtgaagggctgcgcattattgtggtgggcgatttc
gatgcggatggcgccaccagtaccgccctcagcgtgctggccttgcgtgcgctcggttgt
gaaaatgtcagttacctggtgccgaaccgttttgatgacggctatgggcttagcccggaa
gtggtcgatcaagcgcatgcgcgcggcgcgcagctcatcctgacggtggataacggcatc
tcttcacatgcaggcgtggcgcgggctcatgaactggggatcccggtggtggtaaccgat
caccacctgccaggtgacacgttgcccgatgccgaagcgattgttaaccctaatttgcgc
gactgcgattttccgtcgaagtcgctggccggggttggtgttgcgttctatctgatgctg
gcgctgcgcgcttttctgcgtgacagcggctggtttgaggcgcgcggcctggcgatgcca
aatctggcggaactgcttgatttggtggcgctgggaacggtggcggacgtggtgccactg
gatgccaataaccgcattctgacctggcaagggctcagccgcattcgcgccgggcgctgc
cgtccgggcatcaaggcgctgctggaaattgccaaccgcgatgcgcaaaagctggcagca
agcgatctcggttttgcgctcgggccgcgccttaacgcggcgggcaggctggacgatatg
tcggtgggggttgcgctgttactgtgcgataaccttggcgaagcgcgtcagttagccagc
gatctcgacgcgttgaaccagacgcgcaaagagattgagcaggggatgcaggccgaagcc
ctgacgctgtgcgagcagcttgagcgcagcggtgaaacgctgcccggtggcttagcgatg
taccatcccgagtggcaccagggggtggtcggtatcctcgcttcgcgcattaaagagcgc
tttcaccgcccggtgatcgcctttgcgccagccggagacggcgtgctgaaaggttcgggg
cgttcgattcaggggctgcatatgcgcgatgcgctggagcgtctggatatgctgtttccg
ggcatgatgctcaaattcggcggtcacgcaatggcggccggtttgacgctggaagaaaac
cgttttgacgagttccgccagcgttttggcgagctggtgacagaatggctggatccggcg
ttattacaaggtgagattgtctctgacggcccgttgtcggcgcaggagatgacgctggaa
gtcgcggagatgctgcgagaagcgggtccctggggacaaatgttcccggaaccgctgttt
gacggcgagtttcgcctgctgcagcagcggctggtgggtgagcgtcatctcaaggtgatg
ctggagccggttggcggcggtccactgcttgatggaatcgcttttaacgtcgataccacc
tgctggccggataacggtgtgcggcaggtaaatattgcttataaactggatgtgaacgag
tttcgcggcaatcgtagcgtacagctgatcatcgagcatctctggccactttag
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