Klebsiella quasivariicola: B8P98_00720
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Entry
B8P98_00720 CDS
T05116
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
kqv
Klebsiella quasivariicola
Pathway
kqv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
kqv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B8P98_00720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kqv03400
]
B8P98_00720
Enzymes [BR:
kqv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
B8P98_00720
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
B8P98_00720
DNA repair and recombination proteins [BR:
kqv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
B8P98_00720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
zf-B_box
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
ASV17914
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All DBs
Position
145092..145901
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AA seq
269 aa
AA seq
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MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIYRLSDVPVLSVRRRAKYLL
LELPDGWIIVHLGMSGSLRILSEELPAEKHDHVDLVMSNGKVLRYTDPRRFGAWLWTKEL
EGHPVLAHLGPEPLSDAFNADYLQQKCARKKTAIKPWLMDNKLVVGVGNIYASESLFSAG
IHPDRLASSLSRDECEQLVKVIKLVLLRSIEQGGTTLKDFLQSDGKPGYFAQELQVYGRK
GEPCRICGTPVVGTKHAQRATFYCRQCQK
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattaccagaggttgaaaccagccgccgcggcatcgagccgcacctggttggc
gcaactattctgcacgccgttgtgcgcaatggacggttgcgctggccggtatccgaagag
atttatcgtctgagcgacgttccggtgctcagcgtgcgtcgtcgcgctaaatacctgctt
ctggaactgcctgacggctggatcatcgtccacctcgggatgtcgggaagcctgcgcatc
ctgagcgaagaactgccggcagaaaaacacgatcacgttgacctggtcatgagtaatggc
aaggtgctgcgctacaccgatccgcgtcgctttggcgcctggctgtggaccaaagaactg
gaaggccacccggtgctggcgcatctggggccggaaccgctgagcgacgccttcaacgcc
gactatctccagcaaaaatgcgcgaggaagaaaaccgcgatcaaaccctggctgatggat
aacaagctggtagtgggggtcggcaatatctacgccagtgaatcgctgttctccgccggg
atccatcctgaccggttggcgtcctcgctgtcgcgggacgagtgcgagcaactggtgaag
gtgatcaagctggtcctgctgcgttcgatagagcagggcggcactacgctgaaggatttc
ctgcaaagcgatggcaagccgggctattttgcccaggagctgcaggtctatggccgcaag
ggcgagccatgccggatctgcggtacgccggtcgtcgggaccaaacatgcccagcgggcg
actttttattgccgccagtgtcagaagtag
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